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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS90543.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
90543.1 |
Public |
Mus musculus |
9 |
Arhgef12 |
23 |
108 |
98 |
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Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 90543.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000072767.6 |
ENSMUSP00000072547.6 |
Accepted |
alive |
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NCBI |
NM_001359232.1 |
NP_001346161.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001346161.1 |
1543 |
Q8R4H2 |
1543 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 90543.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4632 nt): ATGAGTGGCACACAGTCTACTATCACGGACAGGTTTCCCCTCAAAAAACCTATAAGGCATGGAAGTATTT TGAACCGAGAGTCACCAACAGATAAGAAACAGAAAGTTGAACGCAGTTCATCGCATGATTTTGACCCCAC AGATAGCTCCTCCAAGAAGACAAAGTCTAGTTCAGAGGAGAGTAGATCCGAGATCTATGGTCTTGTTCAG CGCTGTGTGATCATCCAGAAAGACGACAATGGCTTCGGGCTGACAGTCAGTGGAGACAATCCGGTCTTCG TACAATCTGTCAAAGAAGATGGAGCAGCCATGCGTGCTGGAGTACAAACAGGTGATCGAATCATCAAGGT GAATGGTACTCTGGTGACTCATTCAAATCATCTGGAGGTGGTGAAACTAATCAGATCTGGTTCCTATGTA GCTCTCACTGTCCAGGGACGCCCACCTGGGTCGCCCCAGATCCCACTTGCTGATTCTGAAGTAGAGCCAT CAGTCACTGGACATATGTCTCCCATTATGACATCCCCTCATTCCCCTGGAGCAGCCGGGAATATGGAGAG AATCACCAGTCCTGTGCTCGTGGGGGAGGAAAACAATGTGGTCCATAACCAGAAAGTAGAGATTCTGAGA AAGATGTTACAGAAGGAACAGGAACGGCTGCAGTTGCTGCAGGAAGATTACAACCGAACGGCTACCCAAA GATTGCTCAAGGAGATCCAGGAGGCCAAGAAGCACATCCCGCAGCTGCAGGAGCAGCTGTCCAAAGCCAC GGGCTCTGCTCAGGACGGAGCTGTAATTGCACCCTCCAGGCCATTAGGTGATGCCCTAACACTCAGTGAG GCAGAAGCAGATCCTGGAGATGGCCTGTGCAGGACTGACTGGAGCAGTGGAGATGCTTCTCGGCCCAGTA GTGACAGTGCTGATAGTCCCAAGAGTAGCCTGAGAGAAAGGAGTTACCTGGAGGAAGCCCCAGAGAGAAG TGAAGGAGTTCAGGACGCTGAGCCGCAGTCGCTGGTCGGCAGTCCCTCCACCCGGGGCGCCCCTCACATC ATTGGAGCAGAGGATGATGATTTTGGTACTGAGCATGAGCAGATCAATGGACAGTGCAGCTGTTTCCAGA GCATTGAATTGCTGAAGTCTCGCCCTGCTCACTTGGCTGTTTTCTTACACCATGTAGTCTCACAGTTTGA CCCTGCAACATTGCTCTGTTATCTCTATTCAGACCTGTATAAGCAGACAAACTCCAAGGAGACTCGGCGT GTCTTCCTGGAGTTTCATCAGTTCTTCTTGGACCGGTCTGCACACCTGAAGGTTCCAGTTCCTGAGGAAA TCTCCGTGGATCTAGAAAAGAGAAGACCTGAGCTTATTCCTGAGGATCTGCATCGCCTCTACATTCAGAC AATGCAGGAGAGAGTCCACCCTGAAGTTCAGAGGCACTTGGAGGATTTCCGACAGAAACGCAGCATGGGG CTGACCTTGGCTGAGAGTGAGCTGACTAAACTTGATGCAGAGAGAGACAAGGACCGGGGAACTCTGGAGA AGGAGCGAGCATGTGCGGAACAGATCGTTACCAAAATTGAAGAAGTGTTGATGACTGCTCAGGCTGTAGA AGAAGAAAGGAGTTCCACAATGCAGTATGTAATTCTCATGTATATGAAGTATTTGGGAGTAAAAGTGAAA GAACCTCGAAACTTGGAGCACAAGCGGGGTCGGATCGGCTTCCTTCCAAAGATCAAGCAAAGCATGAAGA AAGATAGAGAGGGCGAAGAAAAAGGGAAGCGAAGAGGATTCCCCAGCATTTTGGGACCCCCAAGAAGACC AAGCCGCCACGACAACAGTGCAATTGGCAGGGCCATGGAGATACAGAAGTCACGCCACCCGAAGCACTTA TCCACTCCCTCGTCTGTGAGTCCTGAGCCTCAGGACCCTGCCAAGTTGCGCCAGAGTGGAGTAGCCAATG AAGGAACAGACACTGGATACCTGCCCGCCAGTTCCATGTCCTCTGCCACCTCAGGGACTGCTCTTTCCCA AGAGGGAGGGAGAGAGAATGATACAGGAACAAAACAAGTGGGAGAAGCATCGGCGCCTGGAGACTGCTTG GACAGCACACCTCGAGTCCCCACTACTGTTTTCGACTTCCCTCCTCCTCTATTAGATCAAGTGCAGGAGG AGGAGTGTGAAGTAGAGAGGGTGGCAGAACATGGGACCCCAAAACCCTTTCGGAAGTTTGACAGCATCGC CTTTGGAGAAAGTCAGAGTGAGGATGAGCAGTTTGAAAATGACCTGGAGACAGATCCACCCAACTGGCAG CAGCTTGTTAGCAGAGAAGTGTTACTGGGACTGAAACCTTCTGAGATCAAAAGACAGGAAGTGATTAATG AATTGTTCTACACTGAGAGAGCTCATGTCCGGACACTGAAGGTTCTTGACCAAGTATTCTATCAGCGAGT GTCCAGAGAAGGGATTCTATCACCTTCAGAACTACGCAAGATTTTTTCAAACTTGGAAGATATCCTTCAA CTTCATGTTGGGTTGAATGAGCAAATGAAAGCTGTCCGAAAAAGGAATGAAACTTCTGTTATTGATCATA TTGGGGAAGATCTGCTCATCTGGTTTAGTGGACCAGGAGAGGAGAAGCTGAAACATGCTGCTGCCACATT CTGCAGTAACCAACCTTTCGCCCTGGAAATGATCAAGTCTCGCCAGAAAAAGGATTCTCGATTCCATACT TTTGTGCAAGACGCTGAGAGTAACCCCCTGTGCCGTCGTCTTCAGCTGAAGGACATCATTCCCACCCAAA TGCAGAGACTCACTAAGTACCCGCTTCTTTTGGATAACATTGCCAAGTACACAGAATGGCCTCCAGAAAG GGAAAAGGTGAAGAAGGCTGCAGACCATTGTCGTCAGATCTTAAATTATGTAAATCAGGCTGTCAGGGAG GCAGAAAACAAGCAGCGCTTAGAAGACTATCAGCGTCGCCTTGACACCTCCAATCTCAAGTTGTCCGAGT ACCCAAATGTTGACGAGCTCAGGAATTTGGATTTAACAAAAAGAAAGATGATTCATGAAGGGCCGTTGGT CTGGAAGGTGAATAGAGATAAAAGCATCGATCTTTATACACTGCTGCTGGAAGACATCCTTGTGCTGCTA CAGAAGCAGGATGACAGGCTGGTGCTAAGGTGCCACAGCAAGATTCTGGCATCCACAGCCGACAGCAAAC ACACCTTCAGCCCTGTCATTAAGCTGAGCACGGTGCTGGTTCGGCAGGTGGCGACAGATAACAAAGCTTT ATTCGTCATCTCCATGTCAGATAATGGAGCCCAAATTTATGAATTGGTAGCACAGACGGTTTCTGAAAAG ACAGTCTGGCAAGACCTCATCTGTCGAATGGCTGCGTCAGTGAAGGAGCAGTCTACAAAGCCGATTCCCC TCCCACAGCCGCCACCTTGCGAAGGAGACAATGATGAAGAAGAACCAGCCAAGTTAAAAGTGGAGCACCA TGATCTTTCAGTCGCTGGTCTGCAAAGTCCAGACAGAGTTTTGGGATTAGAATCTCCCTTAATTTCGTCA AAGCCTCAGTCTCATTCACTGAATACCCCTGGCAAATCAGCGGCAGAACATCTCTTTGTGACCGCAACAC AGTTTGCAAAGGAACAGCATGCAAATGGGGCACTCAAGGAAGGTGATGGCGGGTATCCAGTCACAATCCC AGGTCCACACTTGCCTGTGTCAGAGGAGCGGTGGGCATTGGACGCACTGAGAAATTTGGGCTTGTTGAAG CAGTTGCTGGTACAGCAGTTAGGTCTCACCGAGAAGAGTACTCAGGAAGACTGGCAGTCCTTCTCACGAT ACGGGCCAGCTTCTGAAGAGGTACAGGCAGACAGTGGCATCCGGGACTTGGAAAATGTTAAGGCTTGTCA TGCCAGGGAAGGACAGATGTCTTTTAAAACTGGAACTGGTGATATTGCAACTTGTGACAGTCCACGGACT TCAACTGAGTCTTGTGCTGCACAGGATTCAGTGATACTGGCATCCCAAGACAGCCAGGCAAGTAACGTTT TAGTAATGGACCACATGATCCTGACCCCAGAGATGCCTCCTGCAGAGCCAGAAGGGGGTCTGGATGAGAG TGGAGAGCACTTTTTTGATGCCCGTGAAGCACATAGTGATGATAATCCATCAGAAGGTGATGGAGCAGTT AAAAAGGAAGAGAAGGATGTTAATTTACGCATCTCAGGAAACTGTTTGATCCTTGATGGCTATGATGCAG TTCAGGAGAGCTCCACAGATGAGGAGGTTGCCTCCTCGTTCCCCCTGCAGCCTGTGACGGGCATCCCCGC TGTGGACTCCAGCCACCAGCAGCAACATTCCCCTCAGAATGTGCATCCCGAGGGGCCGGTTTCACCATTC ACCCCAGAATTCCTGGTCCAGCGGCACTGGCGAGCTATGGAGGATACCTGTTTTGAGATCCAGAGTCCCT CATGTACAGATTCACAAAGCCAAATCCTGGAGTACATTCATAAAATAGAGGCTGACCTGGAACACTTAAA GAAGGTGGAGGAAAGTTACGCTCTTCTTTGCCAAAGGCTGGCTGGCTCAGCCCTCCCCGACAAGCTCTCA GATAAAAGTTAG
Translation (1543 aa): MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSSSHDFDPTDSSSKKTKSSSEESRSEIYGLVQ RCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIRSGSYV ALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMTSPHSPGAAGNMERITSPVLVGEENNVVHNQKVEILR KMLQKEQERLQLLQEDYNRTATQRLLKEIQEAKKHIPQLQEQLSKATGSAQDGAVIAPSRPLGDALTLSE AEADPGDGLCRTDWSSGDASRPSSDSADSPKSSLRERSYLEEAPERSEGVQDAEPQSLVGSPSTRGAPHI IGAEDDDFGTEHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR VFLEFHQFFLDRSAHLKVPVPEEISVDLEKRRPELIPEDLHRLYIQTMQERVHPEVQRHLEDFRQKRSMG LTLAESELTKLDAERDKDRGTLEKERACAEQIVTKIEEVLMTAQAVEEERSSTMQYVILMYMKYLGVKVK EPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSILGPPRRPSRHDNSAIGRAMEIQKSRHPKHL STPSSVSPEPQDPAKLRQSGVANEGTDTGYLPASSMSSATSGTALSQEGGRENDTGTKQVGEASAPGDCL DSTPRVPTTVFDFPPPLLDQVQEEECEVERVAEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQ QLVSREVLLGLKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ LHVGLNEQMKAVRKRNETSVIDHIGEDLLIWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFHT FVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPPEREKVKKAADHCRQILNYVNQAVRE AENKQRLEDYQRRLDTSNLKLSEYPNVDELRNLDLTKRKMIHEGPLVWKVNRDKSIDLYTLLLEDILVLL QKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEK TVWQDLICRMAASVKEQSTKPIPLPQPPPCEGDNDEEEPAKLKVEHHDLSVAGLQSPDRVLGLESPLISS KPQSHSLNTPGKSAAEHLFVTATQFAKEQHANGALKEGDGGYPVTIPGPHLPVSEERWALDALRNLGLLK QLLVQQLGLTEKSTQEDWQSFSRYGPASEEVQADSGIRDLENVKACHAREGQMSFKTGTGDIATCDSPRT STESCAAQDSVILASQDSQASNVLVMDHMILTPEMPPAEPEGGLDESGEHFFDAREAHSDDNPSEGDGAV KKEEKDVNLRISGNCLILDGYDAVQESSTDEEVASSFPLQPVTGIPAVDSSHQQQHSPQNVHPEGPVSPF TPEFLVQRHWRAMEDTCFEIQSPSCTDSQSQILEYIHKIEADLEHLKKVEESYALLCQRLAGSALPDKLS DKS
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