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Report for CCDS91026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91026.1 Public Homo sapiens 1 SYT6 24 110 108 CCDS HistoryNCBI Gene:148281Re-query CCDS DB by CCDS ID:91026.1Re-query CCDS DB by GeneID:148281See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91026.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369547.6 ENSP00000358560.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369547.6Link to Ensembl Protein Viewer:ENSP00000358560.2Re-query CCDS DB by Nucleotide ID:ENST00000369547Re-query CCDS DB by Protein ID:ENSP00000358560
Original member Current member NCBI NM_001366224.1 NP_001353153.1 Accepted alive Link to Nucleotide Sequence:NM_001366224.1Link to Protein Sequence:NP_001353153.1Re-query CCDS DB by Nucleotide ID:NM_001366224Re-query CCDS DB by Protein ID:NP_001353153Link to BLAST:NP_001353153.1

Chromosomal Locations for CCDS 91026.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 114092011 114092082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 114097727 114097877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 114099094 114099265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 114103601 114103721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 114137495 114138053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 114139615 114139963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 114153610 114153772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1587 nt):
ATGAGCGGAGTGTGGGGGGCCGGCGGGCCTCGGTGCCAGGAGGCGCTCGCGGTCCTCGCCTCGCTGTGCC
GGGCCCGGCCGCCCCCTCTCGGGCTGGACGTGGAGACTTGTCGGAGCTTCGAGCTGCAGCCCCCAGAGCG
GAGTCCCAGCGCGGCAGGCGCAGGCACCTCTGTCAGCCTCCTCGCAGTTGTAGTTATTGTGTGTGGCGTG
GCCCTGGTGGCAGTTTTTCTCTTTCTCTTTTGGAAGCTGTGCTGGATGCCCTGGAGGAACAAGGAGGCCT
CCAGTCCCTCTTCTGCTAATCCCCCCTTGGAAGCCCTCCAGAGCCCCAGCTTCAGAGGCAACATGGCGGA
CAAGCTGAAGGACCCCAGCACCCTGGGCTTCCTGGAGGCGGCCGTGAAGATCAGCCACACGTCCCCAGAT
ATCCCAGCTGAGGTGCAGATGTCGGTCAAGGAGCACATCATGCGTCACACCCGGCTGCAGCGGCAAACTA
CAGAGCCAGCGTCATCCACCAGGCACACGTCCTTCAAGCGCCACCTGCCAAGGCAGATGCATGTCTCCAG
TGTAGACTATGGCAATGAGCTTCCACCAGCAGCAGAGCAGCCCACCAGCATTGGCCGCATCAAGCCTGAG
CTCTACAAGCAGAAGTCGGTGGATGGGGAGGATGCCAAGTCTGAGGCCACCAAGAGCTGCGGGAAGATCA
ACTTCAGCCTACGCTACGATTACGAGACCGAGACCCTGATTGTGCGTATCCTGAAGGCTTTTGACCTCCC
TGCCAAGGACTTTTGTGGAAGCTCTGACCCTTATGTCAAGATCTACCTCCTGCCTGACCGCAAATGCAAG
CTGCAGACCCGGGTGCACCGCAAGACCCTGAACCCCACCTTTGATGAGAACTTCCACTTCCCTGTGCCCT
ATGAGGAGCTGGCTGACCGCAAGCTGCATCTCAGTGTCTTCGACTTTGACCGCTTCTCCCGCCATGACAT
GATTGGCGAGGTCATCCTGGACAACCTCTTTGAGGCCTCTGACCTGTCTCGGGAAACCTCCATCTGGAAG
GATATCCAATATGCCACAAGTGAAAGCGTGGACTTGGGAGAGATCATGTTCTCCCTTTGCTACCTGCCCA
CTGCAGGCAGGCTCACCCTCACAGTGATTAAGTGTCGGAACCTCAAGGCGATGGACATCACAGGCTATTC
AGATCCCTATGTGAAAGTGTCCTTGCTCTGTGATGGGCGGAGGCTGAAGAAGAAGAAAACAACCATAAAG
AAAAACACTCTCAATCCTGTCTACAATGAGGCCATCATCTTTGACATTCCCCCGGAAAACATGGATCAAG
TCAGCCTGCTCATCTCAGTCATGGACTATGATCGAGTGGGCCACAATGAGATCATAGGAGTCTGTCGTGT
GGGGATCACTGCTGAAGGCCTGGGCAGGGACCACTGGAACGAGATGCTGGCATACCCCCGGAAGCCCATC
GCACACTGGCACTCCTTGGTGGAGGTAAAGAAATCCTTCAAAGAGTGGCAGGGCCGAGCTGCTAGCTTCG
ACAGTGAGAGCTCGTGCCCATCTCCGAAACCACCTCCAACACCATGA

Translation (528 aa):
MSGVWGAGGPRCQEALAVLASLCRARPPPLGLDVETCRSFELQPPERSPSAAGAGTSVSLLAVVVIVCGV
ALVAVFLFLFWKLCWMPWRNKEASSPSSANPPLEALQSPSFRGNMADKLKDPSTLGFLEAAVKISHTSPD
IPAEVQMSVKEHIMRHTRLQRQTTEPASSTRHTSFKRHLPRQMHVSSVDYGNELPPAAEQPTSIGRIKPE
LYKQKSVDGEDAKSEATKSCGKINFSLRYDYETETLIVRILKAFDLPAKDFCGSSDPYVKIYLLPDRKCK
LQTRVHRKTLNPTFDENFHFPVPYEELADRKLHLSVFDFDRFSRHDMIGEVILDNLFEASDLSRETSIWK
DIQYATSESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTIK
KNTLNPVYNEAIIFDIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGITAEGLGRDHWNEMLAYPRKPI
AHWHSLVEVKKSFKEWQGRAASFDSESSCPSPKPPPTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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