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Report for CCDS91475.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91475.1 Public Homo sapiens 11 GLYATL1 24 110 108 CCDS HistoryNCBI Gene:92292Re-query CCDS DB by CCDS ID:91475.1Re-query CCDS DB by GeneID:92292See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91475.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000685442.1 ENSP00000510029.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000685442.1Link to Ensembl Protein Viewer:ENSP00000510029.1Re-query CCDS DB by Nucleotide ID:ENST00000685442Re-query CCDS DB by Protein ID:ENSP00000510029
Original member Current member NCBI NM_001389718.2 NP_001376647.1 Accepted alive Link to Nucleotide Sequence:NM_001389718.2Link to Protein Sequence:NP_001376647.1Re-query CCDS DB by Nucleotide ID:NM_001389718Re-query CCDS DB by Protein ID:NP_001376647Link to BLAST:NP_001376647.1

Chromosomal Locations for CCDS 91475.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 58947903 58947965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 58954770 58954896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 58955176 58955353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 58955610 58956027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGGAGGTGCTGGTGGATTCCTGGCCTGAATATCAGATGGTTATTATCCGGCCTCAAAAGCAGGAGATGA
CTGATGACATGGATTCATACACAAACGTATATCGTATGTTCTCCAAAGAGCCTCAAAAATCAGAAGAAGT
TTTGAAAAATTGTGAGATCGTAAACTGGAAACAGAGACTCCAAATCCAAGGTCTTCAAGAAAGTTTAGGT
GAGGGGATAAGAGTGGCTACATTTTCAAAGTCAGTGAAAGTAGAGCATTCGAGAGCACTCCTCTTGGTTA
CGGAAGATATTCTGAAGCTCAATGCCTCCAGTAAAAGCAAGCTTGGAAGCTGGGCTGAGACAGGCCACCC
AGATGATGAATTTGAAAGTGAAACTCCCAACTTTAAGTATGCCCAGCTGGATGTCTCTTATTCTGGGCTG
GTAAATGACAACTGGAAGCGAGGGAAGAATGAGAGGAGCCTGCATTACATCAAGCGCTGCATAGAAGACC
TGCCAGCAGCCTGTATGCTCGGCCCAGAGGGAGTCCCGGTCTCATGGGTAACCATGGACCCTTCTTGTGA
AGTAGGAATGGCCTACAGCATGGAAAAATACCGAAGGACAGGCAACATGGCACGAGTGATGGTGCGATAC
ATGAAATATCTGCGTCAGAAGAATATTCCATTTTACATCTCTGTGTTGGAAGAAAATGAAGACTCCCGCA
GATTTGTGGGGCAGTTTGGTTTCTTTGAGGCCTCCTGTGAGTGGCACCAATGGACTTGCTACCCACAGAA
TCTAGTTCCATTTTAG

Translation (261 aa):
MEVLVDSWPEYQMVIIRPQKQEMTDDMDSYTNVYRMFSKEPQKSEEVLKNCEIVNWKQRLQIQGLQESLG
EGIRVATFSKSVKVEHSRALLLVTEDILKLNASSKSKLGSWAETGHPDDEFESETPNFKYAQLDVSYSGL
VNDNWKRGKNERSLHYIKRCIEDLPAACMLGPEGVPVSWVTMDPSCEVGMAYSMEKYRRTGNMARVMVRY
MKYLRQKNIPFYISVLEENEDSRRFVGQFGFFEASCEWHQWTCYPQNLVPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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