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Report for CCDS91546.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91546.1 Public Homo sapiens 11 AAMDC 24 110 108 CCDS HistoryNCBI Gene:28971Re-query CCDS DB by CCDS ID:91546.1Re-query CCDS DB by GeneID:28971See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91546.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533193.5 ENSP00000436086.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533193.5Link to Ensembl Protein Viewer:ENSP00000436086.1Re-query CCDS DB by Nucleotide ID:ENST00000533193Re-query CCDS DB by Protein ID:ENSP00000436086
Original member Current member NCBI NM_001392031.1 NP_001378960.1 Accepted alive Link to Nucleotide Sequence:NM_001392031.1Link to Protein Sequence:NP_001378960.1Re-query CCDS DB by Nucleotide ID:NM_001392031Re-query CCDS DB by Protein ID:NP_001378960Link to BLAST:NP_001378960.1
Original member Current member NCBI NM_001392032.1 NP_001378961.1 Accepted alive Link to Nucleotide Sequence:NM_001392032.1Link to Protein Sequence:NP_001378961.1Re-query CCDS DB by Nucleotide ID:NM_001392032Re-query CCDS DB by Protein ID:NP_001378961Link to BLAST:NP_001378961.1
Original member Current member NCBI NM_001392033.1 NP_001378962.1 Accepted alive Link to Nucleotide Sequence:NM_001392033.1Link to Protein Sequence:NP_001378962.1Re-query CCDS DB by Nucleotide ID:NM_001392033Re-query CCDS DB by Protein ID:NP_001378962Link to BLAST:NP_001378962.1

Chromosomal Locations for CCDS 91546.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 77842497 77842628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77855345 77855482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77869722 77869817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77872175 77872315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGACTTCCCCTGAAATTGCTTCCTTATCATGGGGGCAAATGAAAGTAAAAGGCTCTAATACAACCTATA
AGGACTGCAAAGTATGGCCAGGGGGTAGTCGGACTTGGGATTGGAGAGAAACAGGAACTGAGAGTCTCAC
TCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCATGC
CATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCTGCCACCACACCCAGCATTCTCCTG
GTGTGCAGCCTGCAGATGTGAAGGAAGTTGTTGAGAAGGGTGTACAGACTCTTGTGATTGGCCGAGGGAT
GAGTGAGGCCTTGAAGGTGCCTTCATCAACTGTGGAGTACCTCAAGAAACATGGCATTGATGTGCGGGTC
CTCCAGACAGAGCAGGCAGTGAAGGAGTATAATGCCTTGGTTGCCCAAGGGGTCAGGGTGGGAGGTGTCT
TCCATTCCACCTGCTGA

Translation (168 aa):
MTSPEIASLSWGQMKVKGSNTTYKDCKVWPGGSRTWDWRETGTESLTLLPRLECSGAISAHCNLHLPGSC
HSPASASQVAGTTGACHHTQHSPGVQPADVKEVVEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRV
LQTEQAVKEYNALVAQGVRVGGVFHSTC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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