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Report for CCDS91554.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91554.1 Public Homo sapiens 11 PCF11 24 110 108 CCDS HistoryNCBI Gene:51585Re-query CCDS DB by CCDS ID:91554.1Re-query CCDS DB by GeneID:51585See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91554.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000690938.1 ENSP00000508500.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000690938.1Link to Ensembl Protein Viewer:ENSP00000508500.1Re-query CCDS DB by Nucleotide ID:ENST00000690938Re-query CCDS DB by Protein ID:ENSP00000508500
Original member Current member NCBI NM_001346413.3 NP_001333342.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001346413.3Link to Protein Sequence:NP_001333342.1Re-query CCDS DB by Nucleotide ID:NM_001346413Re-query CCDS DB by Protein ID:NP_001333342Link to BLAST:NP_001333342.1

Chromosomal Locations for CCDS 91554.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 83157440 83157631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83161327 83161452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83163679 83163867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83164207 83164401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83165600 83166714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83167125 83167308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83167415 83167898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83168428 83169995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83171818 83171914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83177085 83177204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83177714 83177819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83181008 83181191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83181854 83182009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83182399 83182491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83183038 83183073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83184679 83184894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5061 nt):
ATGTCAGAGCAGACGCCGGCCGAGGCCGGTGCTGCGGGGGCCCGGGAGGACGCCTGTCGGGATTATCAGT
CATCGCTCGAAGACCTGACCTTCAATAGCAAGCCGCACATCAATATGCTGACCATTCTAGCCGAGGAGAA
CCTGCCCTTCGCCAAGGAGATCGTCTCTCTCATCGAGGCCCAAACCGCCAAGGCTCCTTCCTCAGAGAAG
CTTCCTGTTATGTACCTTATGGATTCTATTGTGAAAAACGTTGGAAGAGAGTATCTCACTGCCTTTACTA
AAAATCTAGTTGCAACATTTATTTGTGTGTTTGAAAAGGTGGATGAAAATACTAGGAAAAGTTTATTTAA
GTTACGTTCTACATGGGATGAAATATTCCCTTTGAAGAAACTTTATGCCCTGGATGTCAGAGTCAATTCA
TTAGATCCTGCTTGGCCTATTAAACCTCTACCCCCCAATGTGAATACGTCTAGCATCCATGTGAATCCTA
AATTTTTAAATAAATCGCCCGAGGAGCCTTCAACACCTGGTACAGTGGTCAGTTCCCCTAGCATCTCCAC
TCCTCCAATTGTTCCTGATATACAAAAGAATCTTACACAAGAACAACTAATAAGGCAGCAGTTACTGGCA
AAGCAAAAACAGTTGTTAGAACTTCAGCAGAAAAAGCTGGAGCTTGAGCTAGAGCAAGCTAAGGCACAGT
TGGCAGTTTCTCTTAGTGTTCAGCAGGAAACATCCAATTTAGGTCCTGGATCTGCACCATCCAAATTACA
TGTTTCACAGATTCCCCCTATGGCAGTTAAAGCTCCTCATCAGGTTCCTGTGCAATCTGAGAAAAGCCGT
CCAGGACCATCCTTACAAATTCAGGATTTAAAAGGAACTAACCGGGATCCTCGTCTGAACAGGATAAGCC
AACATTCTCATGGAAAAGATCAGAGTCACAGGAAAGAATTTCTAATGAACACATTAAACCAGTCTGATAC
TAAGACAAGTAAAACTATACCCTCTGAAAAACTAAATTCATCCAAGCAAGAAAAAAGTAAATCAGGTGAA
AAAATAACCAAGAAAGAACTTGACCAATTAGATTCTAAATCGAAATCGAAATCGAAATCACCCTCACCTT
TGAAAAACAAATTATCTCACACAAAAGACTTGAAAAATCAAGAATCGGAAAGTATGAGGTTGTCTGATAT
GAACAAGAGAGATCCAAGATTAAAAAAACATCTTCAGGATAAGACCGATGGCAAAGATGATGATGTGAAA
GAGAAGAGAAAAACTGCAGAAAAAAAGGATAAAGATGAGCACATGAAGTCATCCGAACACAGACTGGCTG
GAAGTAGAAATAAAATCATAAATGGCATTGTACAAAAACAGGATACAATAACAGAAGAGTCAGAAAAACA
GGGGACAAAACCAGGGAGATCGAGTACTAGAAAGCGATCAAGATCTCGATCACCCAAGTCTAGGTCACCA
ATTATACATTCCCCAAAGAGAAGAGATAGGCGGTCACCCAAACGAAGGCAAAGAAGTATGTCTCCAACAT
CGACACCTAAAGCTGGAAAGATTCGCCAATCTGGAGCTAAGCAGTCACATATGGAAGAGTTTACACCACC
TTCTAGGGAAGACAGAAATGCTAAGAGAAGTACTAAACAGGATATTCGGGATCCAAGGCGAATGAAAAAG
ACTGAAGAGGAGCGACCACAAGAAACTACAAATCAGCATTCTACAAAGTCAGGCACTGAACCAAAGGAGA
ATGTAGAAAACTGGCAAAGTTCCAAGTCTGCCAAAAGATGGAAATCTGGTTGGGAAGAAAATAAAAGCTT
ACAACAGGTTGATGAACATAGTAAACCTCCTCATCTGAGGCATAGGGAGAGCTGGTCAAGCACTAAAGGA
ATTTTATCACCTCGAGCCCCAAAGCAGCAACAGCATCGATTAAGTGTAGATGCCAATCTTCAGATTCCTA
AAGAGTTAACTCTTGCAAGCAAAAGAGAATTACTTCAAAAGACGAGTGAACGTTTAGCATCTGGTGAAAT
TACACAGGATGACTTCCTTGTTGTTGTGCATCAAATTCGACAGCTATTTCAGTATCAAGAAGGTAAACAT
AGATGCAATGTACGGGATAGTCCTACAGAAGAAAATAAAGGTGGATTAAAAAAGAAACCTCTCTTATCTG
ATGCTGAATTAACCTACTATGAACATAAAGCAAAACTGAAAAGGACACAGGTTCAGCATTCATTTCCAAG
ACTTGATCTCTTAGATCCTGATATTTTTGACTACCCTTTGACTGATGCCTTGTTGTCTGGAATAGAATGT
GAGCCATCCAAAAGTAAACATGCAAGTAGGAATAGTGGAGCACAGTTTGACAGAAAAGAACAATTTAGTG
AAAGAGCAAGACGTCTTTCTCCTATATCTGGGAGTCGTACTTATGCTGAGAATCTTTCACCCCATGAGGG
CCGGAGAAGACATGACGAGCAAGTCTCTGCTAAAGGTGTGCGAGAAGAGCAGAGATCTCCATTCAATGAT
CGTTTTCCACTTAAGCGACCTCGATATGAAGATTCAGATAAACCATTTGTAGATAGTCCAGCATCAAGAT
TCGCCGGCCTGGATACAAATCAGCGACTTACAGCTTTAGCTGAAGACAGACCGTTATTTGATGGACCTAG
TAGGCCATCAGTAGCAAGAGATGGCCCAACGAAGATGATTTTTGAAGGACCCAATAAATTAAGCCCTCGA
ATTGATGGACCTCCCACACCAGCTTCTCTTCGGTTTGATGGGTCACCAGGACAAATGGGGGGAGGAGGCC
CTTTGAGATTTGAGGGGCCACAAGGTCAGCTAGGAGGTGGGTGTCCTTTGAGATTTGAAGGTCCTCCAGG
ACCAGTGGGGACACCTCTGCGGTTTGAGGGCCCAATTGGTCAAGCAGGAGGAGGTGGTTTTCGGTTTGAA
GGTTCCCCTGGTCTGAGGTTTGAGGGATCTCCAGGTGGTTTGAGATTTGAGGGACCAGGAGGCCAGCCTG
TGGGTGGTCTGAGGTTTGAGGGACATCGTGGTCAACCTGTGGGTGGTCTAAGGTTTGAGGGACCTCATGG
TCAGCCTGTGGGTGGACTTAGATTTGATAATCCCCGAGGTCAGCCTGTAGGTGGACTTAGATTTGAGGGG
GGTCATGGTCCATCAGGGGCTGCGATTAGGTTTGATGGACCTCATGGTCAGCCAGGAGGTGGAATCAGAT
TTGAGGGCCCTTTGCTACAGCAAGGGGTTGGAATGAGGTTTGAGGGCCCCCATGGTCAGTCAGTAGCTGG
TCTGAGATTTGAGGGACAACATAATCAACTTGGTGGGAACCTTAGGTTTGAGGGTCCACATGGTCAGCCA
GGGGTTGGTATCAGGTTTGAAGGCCCTTTAGTCCAACAAGGAGGTGGAATGAGGTTTGAGGGTCCTTCTG
TACCAGGAGGTGGCCTGAGAATTGAAGGGCCTCTGGGTCAAGGTGGTCCAAGATTTGAAGGTTGTCATGC
TTTAAGGTTTGATGGGCAGCCAGGTCAGCCGTCACTCTTGCCAAGATTTGATGGATTACATGGTCAGCCA
GGTCCTAGATTTGAAAGGACTCCTGGTCAGCCAGGCCCTCAGAGGTTTGATGGACCACCTGGACAGCAGG
TTCAACCCAGATTTGACGGTGTACCTCAAAGATTTGATGGTCCACAACATCAGCAAGCATCAAGGTTTGA
TATTCCTCTTGGTCTTCAAGGCACAAGATTTGACAATCATCCTTCACAAAGGCTTGAATCAGTATCTTTC
AATCAGACTGGTCCATATAATGATCCACCTGGCAATGCTTTTAATGCCCCATCCCAAGGACTACAGTTCC
AAAGACATGAACAAATATTTGATTCACCTCAAGGACCAAATTTTAATGGACCACATGGCCCTGGAAACCA
GAGTTTCTCTAATCCACTTAACAGAGCTTCTGGACACTATTTTGATGAAAAAAATCTTCAGAGTTCTCAA
TTTGGAAACTTTGGCAATATACCTGCTCCAATGACAGTAGGAAATATTCAGGCATCTCAACAGGTTCTGA
GTGGTGTTGCTCAGCCAGTAGCTTTTGGTCAAGGACAACAGTTTTTACCAGTTCATCCACAAAATCCTGG
ATTTGTTCAGAATCCTTCAGGAGCCCTCCCTAAGGCATATCCTGATAATCATCTCAGTCAGGTGGATGTA
AATGAATTGTTTTCAAAATTGCTAAAAACAGGAATTCTCAAATTGTCCCAAACTGATTCAGCTACAACAC
AAGTAAGTGAAGTAACTGCTCAGCCTCCCCCTGAAGAGGAGGAAGATCAAAATGAAGATCAAGATGTTCC
AGATCTTACTAATTTTACAGTTGAAGAATTGAAACAACGTTATGACAGTGTTATAAATCGACTGTACACT
GGTATTCAGTGTTACTCTTGTGGAATGAGGTTTACAACATCACAGACAGATGTTTATGCAGATCATTTGG
ACTGGCATTATCGGCAAAATAGAACTGAAAAGGATGTTAGCCGAAAAGTCACTCATAGACGTTGGTACTA
CAGTTTAACAGACTGGATAGAATTTGAGGAGATAGCTGATCTGGAAGAACGGGCAAAGAGCCAGTTTTTT
GAAAAGGTGCATGAAGAAGTTGTGCTCAAAACTCAAGAGGCTGCTAAAGAAAAAGAGTTCCAAAGTGTAC
CTGCTGGACCAGCTGGAGCAGTTGAGAGTTGTGAAATCTGTCAAGAACAATTTGAACAATACTGGGATGA
AGAAGAGGAGGAATGGCATTTGAAAAATGCTATTAGAGTAGATGGAAAGATTTATCATCCATCATGTTAT
GAAGATTATCAAAATACATCTTCATTTGATTGTACACCATCTCCCAGCAAGACACCAGTTGAAAACCCCT
TGAATATTATGTTGAACATTGTCAAAAACGAATTGCAGGAACCCTGTGACAGTCCCAAAGTTAAGGAAGA
ACGAATTGATACACCACCAGCTTGTACAGAGGAAAGCATAGCAACACCCTCTGAAATTAAAACAGAAAAT
GACACAGTCGAGTCAGTTTAA

Translation (1686 aa):
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEAQTAKAPSSEK
LPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRSTWDEIFPLKKLYALDVRVNS
LDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVVSSPSISTPPIVPDIQKNLTQEQLIRQQLLA
KQKQLLELQQKKLELELEQAKAQLAVSLSVQQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSR
PGPSLQIQDLKGTNRDPRLNRISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKLNSSKQEKSKSGE
KITKKELDQLDSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTAEKKDKDEHMKSSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSP
IIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGAKQSHMEEFTPPSREDRNAKRSTKQDIRDPRRMKK
TEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSGWEENKSLQQVDEHSKPPHLRHRESWSSTKG
ILSPRAPKQQQHRLSVDANLQIPKELTLASKRELLQKTSERLASGEITQDDFLVVVHQIRQLFQYQEGKH
RCNVRDSPTEENKGGLKKKPLLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIEC
EPSKSKHASRNSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPR
IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE
GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEG
GHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQP
GVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQP
GPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSF
NQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQ
FGNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQNPSGALPKAYPDNHLSQVDV
NELFSKLLKTGILKLSQTDSATTQVSEVTAQPPPEEEEDQNEDQDVPDLTNFTVEELKQRYDSVINRLYT
GIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFF
EKVHEEVVLKTQEAAKEKEFQSVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCY
EDYQNTSSFDCTPSPSKTPVENPLNIMLNIVKNELQEPCDSPKVKEERIDTPPACTEESIATPSEIKTEN
DTVESV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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