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Report for CCDS91617.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91617.1 Public Homo sapiens 11 TMEM218 24 110 108 CCDS HistoryNCBI Gene:219854Re-query CCDS DB by CCDS ID:91617.1Re-query CCDS DB by GeneID:219854See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91617.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000528724.5 ENSP00000436578.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528724.5Link to Ensembl Protein Viewer:ENSP00000436578.1Re-query CCDS DB by Nucleotide ID:ENST00000528724Re-query CCDS DB by Protein ID:ENSP00000436578
Original member Current member NCBI NM_001387249.1 NP_001374178.1 Accepted alive Link to Nucleotide Sequence:NM_001387249.1Link to Protein Sequence:NP_001374178.1Re-query CCDS DB by Nucleotide ID:NM_001387249Re-query CCDS DB by Protein ID:NP_001374178Link to BLAST:NP_001374178.1

Chromosomal Locations for CCDS 91617.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 125097606 125097740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125101201 125101303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125101444 125101521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125102132 125102241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (426 nt):
ATGGCTGGCACTGTGCTCGGAGTCGGTGCGGGCGTGTTCATCTTAGCCCTGCTCTGGGTGGCAGTGCTGC
TGCTGTGTGTGCTGCTGTCCAGAGCCTCCGGGGCGGCGAGGAATTGGGAATTACCAAGAATAAATGGGAA
TGCACCCAGCTGGTACCTGTCTAGGAAGAAGGACTTTGGGATGAAGAGGTTCTCTGTCATTTTTTTATTC
TTCGGTGCTGTGATCATCACATCAGTTCTGTTGCTTTTCCCGCGAGCTGGTGAATTCCCAGCCCCAGAAG
TGGAAGTTAAGATTGTGGATGACTTTTTCATTGGCCGCTATGTCCTGCTGGCTTTCCTTAGTGCCATCTT
CCTTGGAGGCCTCTTCTTGGTTTTAATCCATTATGTTCTGGAGCCGATCTATGCCAAACCACTGCACTCC
TACTGA

Translation (141 aa):
MAGTVLGVGAGVFILALLWVAVLLLCVLLSRASGAARNWELPRINGNAPSWYLSRKKDFGMKRFSVIFLF
FGAVIITSVLLLFPRAGEFPAPEVEVKIVDDFFIGRYVLLAFLSAIFLGGLFLVLIHYVLEPIYAKPLHS
Y


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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