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Report for CCDS91842.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91842.1 Public Homo sapiens 13 C13orf46 24 110 108 CCDS HistoryNCBI Gene:100507747Re-query CCDS DB by CCDS ID:91842.1Re-query CCDS DB by GeneID:100507747See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91842.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636427.3 ENSP00000490032.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000636427.3Link to Ensembl Protein Viewer:ENSP00000490032.2Re-query CCDS DB by Nucleotide ID:ENST00000636427Re-query CCDS DB by Protein ID:ENSP00000490032
Original member Current member NCBI NM_001365455.2 NP_001352384.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001365455.2Link to Protein Sequence:NP_001352384.1Re-query CCDS DB by Nucleotide ID:NM_001365455Re-query CCDS DB by Protein ID:NP_001352384Link to BLAST:NP_001352384.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352384.1 212 A0A1B0GUA9 212 100% 0 0

Chromosomal Locations for CCDS 91842.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 113956773 113956839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113964927 113964994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113967341 113967388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113968467 113968514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113968595 113968760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113970171 113970222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113973808 113973997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (639 nt):
ATGGAGAAGGACACGGGGACCACACACAGGAGGCACCGGCCCGGCCTCAGGGCCCTGCCCTCAGGAGTGG
CCCTTGGGCACCTCAAGGCGGCCAGTGAGGCCTCTGAACTTCAGCGAAGCAGGAGTCTGGGAGGCCTGCA
GCCCGAGGGGGACCCTCCCAGCCGCCCTAGGAAGCCTCACAAGGAGCTGGAGTCCGAAGATCAAGGGAAA
GACCCAAGCAGTAACGCGGAAGATGCCAGCTGTCAGAAAAACCTAGCACAAGACAAGAAGGAAAGCTTCA
GCACCCTTGGGAAGCTGGGTCATGAGAGTGGAAAACAAGACCCAGAGAGGGAGAAGAGCGACTTGGAGGC
CAGCATGCAGGAGGTGCAGGAAGGCGAGCACGCAGACGGAGGCTTGCAGGAGGCCAAGGAACAGGAGGCA
GAGTCCATAAAGCTAAATGACCTTCAGGAAGAAGAGAAAGCATCTGTGTTTGTGGAGATTGATCTGGGAG
ACCATGCTGAGGAGGTGGTCACCGATGCCAAGAAGGAAGAGAAGCCGTCCCAGATGGATGTGGAAGATCT
GTCAGAAGACGAGATGCAGACCAGCTGGGTGTGCTGCATCCCGTACTCCACCAGGAAGAGGGCAAAGGAG
AGCACCTAG

Translation (212 aa):
MEKDTGTTHRRHRPGLRALPSGVALGHLKAASEASELQRSRSLGGLQPEGDPPSRPRKPHKELESEDQGK
DPSSNAEDASCQKNLAQDKKESFSTLGKLGHESGKQDPEREKSDLEASMQEVQEGEHADGGLQEAKEQEA
ESIKLNDLQEEEKASVFVEIDLGDHAEEVVTDAKKEEKPSQMDVEDLSEDEMQTSWVCCIPYSTRKRAKE
ST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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