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Report for CCDS91917.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91917.1 Public Homo sapiens 14 CALM1 24 110 108 CCDS HistoryNCBI Gene:801Re-query CCDS DB by CCDS ID:91917.1Re-query CCDS DB by GeneID:801See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91917.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447653.8 ENSP00000403491.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447653.8Link to Ensembl Protein Viewer:ENSP00000403491.4Re-query CCDS DB by Nucleotide ID:ENST00000447653Re-query CCDS DB by Protein ID:ENSP00000403491
Original member Current member EBI ENST00000544280.6 ENSP00000442853.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544280.6Link to Ensembl Protein Viewer:ENSP00000442853.2Re-query CCDS DB by Nucleotide ID:ENST00000544280Re-query CCDS DB by Protein ID:ENSP00000442853
Original member Current member EBI ENST00000553542.5 ENSP00000450829.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000553542.5Link to Ensembl Protein Viewer:ENSP00000450829.1Re-query CCDS DB by Nucleotide ID:ENST00000553542Re-query CCDS DB by Protein ID:ENSP00000450829
Original member Current member EBI ENST00000659177.1 ENSP00000499421.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000659177.1Link to Ensembl Protein Viewer:ENSP00000499421.1Re-query CCDS DB by Nucleotide ID:ENST00000659177Re-query CCDS DB by Protein ID:ENSP00000499421
Original member Current member EBI ENST00000663135.1 ENSP00000499498.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000663135.1Link to Ensembl Protein Viewer:ENSP00000499498.1Re-query CCDS DB by Nucleotide ID:ENST00000663135Re-query CCDS DB by Protein ID:ENSP00000499498
Original member Current member NCBI NM_001363669.2 NP_001350598.1 Accepted alive Link to Nucleotide Sequence:NM_001363669.2Link to Protein Sequence:NP_001350598.1Re-query CCDS DB by Nucleotide ID:NM_001363669Re-query CCDS DB by Protein ID:NP_001350598Link to BLAST:NP_001350598.1

Chromosomal Locations for CCDS 91917.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 90401333 90401402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90403862 90403968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90404379 90404514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 90404689 90404717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (342 nt):
ATGAGGTCACTGGGTCAGAACCCAACAGAAGCTGAATTGCAGGATATGATCAATGAAGTGGATGCTGATG
GTAATGGCACCATTGACTTCCCCGAATTTTTGACTATGATGGCTAGAAAAATGAAAGATACAGATAGTGA
AGAAGAAATCCGTGAGGCATTCCGAGTCTTTGACAAGGATGGCAATGGTTATATCAGTGCAGCAGAACTA
CGTCACGTCATGACAAACTTAGGAGAAAAACTAACAGATGAAGAAGTAGATGAAATGATCAGAGAAGCAG
ATATTGATGGAGACGGACAAGTCAACTATGAAGAATTCGTACAGATGATGACTGCAAAATGA

Translation (113 aa):
MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL
RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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