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Report for CCDS92052.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92052.1 Public Homo sapiens 15 AGBL1 24 110 108 CCDS HistoryNCBI Gene:123624Re-query CCDS DB by CCDS ID:92052.1Re-query CCDS DB by GeneID:123624See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 92052.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614907.3 ENSP00000490608.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000614907.3Link to Ensembl Protein Viewer:ENSP00000490608.2Re-query CCDS DB by Nucleotide ID:ENST00000614907Re-query CCDS DB by Protein ID:ENSP00000490608
Original member Current member NCBI NM_001386094.1 NP_001373023.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386094.1Link to Protein Sequence:NP_001373023.1Re-query CCDS DB by Nucleotide ID:NM_001386094Re-query CCDS DB by Protein ID:NP_001373023Link to BLAST:NP_001373023.1

Chromosomal Locations for CCDS 92052.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 86079973 86080023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86142004 86142067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86143699 86143845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86154430 86154561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86158933 86159026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86224914 86224951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86247671 86247879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86256853 86257018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86257964 86258031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86262778 86262894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86264258 86264838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86266374 86266457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86266990 86267076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86269919 86270067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86271619 86271706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86279639 86279783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86295255 86295408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86397366 86397546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86522810 86522939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86546002 86546133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86554361 86554537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86674273 86674436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 86907087 86907294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3366 nt):
ATGGCCGAACAAGAAGCTAGTGGGCTACAGGTCCTGCTGCACACGCTTCAGAGCTCCTCTGACAAGGAGT
CCATCCTGACCATCCTCAAGGTCCTCGGAGATCTGCTTTCTGTTGGCACAGACCGGAGAATTCACTACAT
GATCAGCAAGGGTGGCAGTGAAGCTCTTCTGCAGACCCTGGTAGACACAGCGAGGACAGCTCCTCCAGAC
TATGACATCCTCCTGCCTCTCTTCCGGCTGCTGGCCAAAGTTGGCCTAAGAGATAAAAAGATTGGACGGA
AGGCCCTAGAATTGGAAGCACTTGATGTGACATTGATTCTGGCCAGGAAGAACCTATCCCATGGCCAGAA
TCTCCTCCACTGTCTCTGGGCTCTGCGTGTGTTTGCCTCCAGTGTCTCCATGGGAGCCATGCTGGGAATT
AATGGAGCCATGGAACTGCTTTTCAAGGTTATTACTCCTTACACCCGAAAGCGCACCCAAGCAATCAGGG
CAGCCACTGAAGTTTTGGCAGCATTGCTGAAATCCAAGTCGAACGGCCGCAGAGCAGTGAACCGAGGCTA
CGTCACCAGCCTGCTCGGGCTGCACCAGGACTGGCACAGCCATGACACAGCCAACGCCTACGTGCAGATC
CGACGGGGCTTGCTGCTCTGCCTCAGGCACATTGCTGCCCTCCGGTCCGGCAGGGAGGCCTTCCTGGCAG
CACAGGGCATGGAGATCCTCTTCAGCACCACACAGAACTGCCTGGATGACAAGAGCATGGAGCCCGTCAT
CTCTGTGGTGCTTCAGATCCTGAGGCAGTGCTACCCTACGAGTCCACTTCCCTTGGTCACAGCCAGCAGT
GCCTATGCCTTCCCGGTCCCCGGGTGCATCACCACTGAACCTCCACATGATCTACCTGAAGAGGATTTTG
AAGATGATGGCGATGATGAAGTGGACAAAGACTCTGATACTGAAGATGGGAAAGTGGAAGATGATGACTT
GGAAACAGACGTGAACAAGCTGAGTTCCAAACCTGGTCTTGACCGACCTGAAGAGGAACTGATGCAATAT
GAGGTGATGTGTCTTGAGCTCTCCTATAGCTTTGAGGAACTGCAGTCCAAACTTGGAGATGATTTGAACT
CTGAAAAGACTCAGTATGCCAATCACCACCACATTCCAGCCGCTGCCTCCTCAAAACAGCATTGCTACAG
CAAGGACCAAAGCTCCTGTGGGCAAGAAAGAGAATATGCTGTCCAGACTTCCCTTCTGTGCAGGGTGAAG
ACGGGAAGGTCCACTGTGCATCTAGGCTCCAAAAAAAATCCTGGAGTGAACCTGTACCAAAATGTGCAAT
CCAATAGTCTCAGGAGAGATTCTTCTGAAAGTGAAATCCCTGACATTCAGGCTTCCCCGAAAGCAGATGC
CTGGGACGTAGATGCAATTTTCTGCCCAAGGATGAGTGCCTCCTTTTCTAATTCCACTAGGACTAGAGAA
GTTGTCAAAGTAATAGATAAGCTTCTGCAGACACATCTGAAGCGTGTCCCTTTCCACGATCCCTATCTTT
ATATGGCCAAAGCCAGAAGAACCAGCTCTGTGGTGGACTTCAAGATGATGGCATTTCCTGATGTCTGGGG
ACACTGTCCCCCTCCCACCACCCAGCCTATGTTGGAACGAAAATGTGGAGTCCAAAGGATCAGGATATTT
GAGGATATTCGGAGGCTCATCCAGCCAAGTGATGTTATAAATAAAGTTGTCTTCAGTTTAGATGAGCCTT
GGCCTTTGCAAGACAATGCTTCCAATTGTTTACGGTTCTTCTCCAAATTTGAGTCAGGAAATCTTCGCAA
AGCCATCCAAGTGCGTGAGTTCGAGTATGACTTGCTGGTCAACGCAGATGTGAATAGCACCCAGCACCAG
CAGTGGTTCTATTTCAAAGTGAGCGGTATGCAGGCGGCCATCCCTTACCACTTCAACATCATCAACTGTG
AGAAGCCCAACAGCCAGTTTAATTATGGGATGCAGCCCACCCTATATTCTGTGAAGGAGGCTCTTCTTGG
CAAACCCACCTGGATAAGGACAGGCCATGAAATATGTTATTACAAAAATCATTATCGCCAGAGTACAGCT
GTTGCAGGCGGAGCATCTGGGAAGTGCTACTATACCCTCACCTTTGCTGTCACCTTCCCACACAGTGAGG
ATGTCTGCTACCTGGCCTACCACTATCCCTATACCTACACAGCCCTCATGACTCATCTTGACATCCTGGA
AAAGAGTGTCAACCTCAAAGAGGTCTACTTCCGGCAAGATGTTCTCTGCCAGACGCTGGGAGGGAATCCG
TGTCCCTTGGTGACCATCACGGCCATGCCTGAGTCCAACAGTGATGAGCATCTAGAGCAGTTCCGACATC
GTCCATATCAGGTGATCACTGCTCGAGTTCATCCAGGAGAGAGCAATGCCAGTTGGGTGATGAAGGGTAC
CTTGGAGTTCCTGGTCAGCAGTGACCCTGTGGCTAGGCTCTTGAGGGAAAACTTCATCTTCAAGATCATA
CCCATGCTCAACCCAGATGGTGTCATCAACGGCAACCACAGATGCTCACTGAGCGGGGAAGATTTGAACA
GACAATGGCTTTCTCCCAGTGCTCATCTGCAGCCAACCATTTACCATGCCAAAGGCCTCCTCTACCACCT
GAGCAGCATTGGCCGAAGTCCCGTGGTTTTCTGTGACTTCCATGGCCACTCCCAAAAGAAGAATGTGTTC
CTTTATGGCTGTAGCATCAAGGAAACCTTGTGGCAAGCAGCATGCACTGTGGGCACATCTACTATCCTAG
AGGAGGTCAACTACAGGACTCTTCCCAAAATCCTTGATAAGCTAGCACCAGCATTCACAATGAGCAGCTG
CAGCTTTCTCGTGGAGAAATCTCGAGCTTCCACGGCCCGGGTGGTGGTGTGGAGAGAGATGGGGGTGTCC
AGAAGCTACACCATGGAAAGCAGCTACTGTGGCTGCAACCAGGGCCCTTATCAGGGTCTACAGTTTGGTA
CCAGAGAACTGGAGGAGATGGGAGCCATGTTCTGTTTGGGCCTCCTCATCCTGGAGCTCAAATCTGCCAG
CTGCAGCCATCAGCTCCTGGCTCAAGCTGCAACTCTGCTGAGTGCTGAGGAGGACGCTCTGGACCAGCAC
CTCCAACGGTGCAGCAGCAGCAGTGGCAGCGTCCCTTCGGAACTGGAGGATGAACCTGCCTGCTTGGAGG
AGATTGATTACAGTACCGACAACAGCTCAGACCAGGAAGGGAGCTTGTCTGAGCTGGACCGGAGGATCCA
GGAGTGTGCCTTCAATAAGTTTGAGGGAGAGGAAGAAGAGGAGGCACCAGGGCAGGGAGGAGAAGCCATC
CCATAG

Translation (1121 aa):
MAEQEASGLQVLLHTLQSSSDKESILTILKVLGDLLSVGTDRRIHYMISKGGSEALLQTLVDTARTAPPD
YDILLPLFRLLAKVGLRDKKIGRKALELEALDVTLILARKNLSHGQNLLHCLWALRVFASSVSMGAMLGI
NGAMELLFKVITPYTRKRTQAIRAATEVLAALLKSKSNGRRAVNRGYVTSLLGLHQDWHSHDTANAYVQI
RRGLLLCLRHIAALRSGREAFLAAQGMEILFSTTQNCLDDKSMEPVISVVLQILRQCYPTSPLPLVTASS
AYAFPVPGCITTEPPHDLPEEDFEDDGDDEVDKDSDTEDGKVEDDDLETDVNKLSSKPGLDRPEEELMQY
EVMCLELSYSFEELQSKLGDDLNSEKTQYANHHHIPAAASSKQHCYSKDQSSCGQEREYAVQTSLLCRVK
TGRSTVHLGSKKNPGVNLYQNVQSNSLRRDSSESEIPDIQASPKADAWDVDAIFCPRMSASFSNSTRTRE
VVKVIDKLLQTHLKRVPFHDPYLYMAKARRTSSVVDFKMMAFPDVWGHCPPPTTQPMLERKCGVQRIRIF
EDIRRLIQPSDVINKVVFSLDEPWPLQDNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQHQ
QWFYFKVSGMQAAIPYHFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEICYYKNHYRQSTA
VAGGASGKCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEKSVNLKEVYFRQDVLCQTLGGNP
CPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGESNASWVMKGTLEFLVSSDPVARLLRENFIFKII
PMLNPDGVINGNHRCSLSGEDLNRQWLSPSAHLQPTIYHAKGLLYHLSSIGRSPVVFCDFHGHSQKKNVF
LYGCSIKETLWQAACTVGTSTILEEVNYRTLPKILDKLAPAFTMSSCSFLVEKSRASTARVVVWREMGVS
RSYTMESSYCGCNQGPYQGLQFGTRELEEMGAMFCLGLLILELKSASCSHQLLAQAATLLSAEEDALDQH
LQRCSSSSGSVPSELEDEPACLEEIDYSTDNSSDQEGSLSELDRRIQECAFNKFEGEEEEEAPGQGGEAI
P


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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