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Report for CCDS92109.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92109.1 Public Homo sapiens 16 NPIPB2 24 110 108 CCDS HistoryNCBI Gene:729978Re-query CCDS DB by CCDS ID:92109.1Re-query CCDS DB by GeneID:729978See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92109.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000673243.1 ENSP00000500799.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000673243.1Link to Ensembl Protein Viewer:ENSP00000500799.1Re-query CCDS DB by Nucleotide ID:ENST00000673243Re-query CCDS DB by Protein ID:ENSP00000500799
Original member Current member NCBI NM_001395854.1 NP_001382783.1 Accepted alive Link to Nucleotide Sequence:NM_001395854.1Link to Protein Sequence:NP_001382783.1Re-query CCDS DB by Nucleotide ID:NM_001395854Re-query CCDS DB by Protein ID:NP_001382783Link to BLAST:NP_001382783.1
Original member Current member NCBI NM_001395855.1 NP_001382784.1 Accepted alive Link to Nucleotide Sequence:NM_001395855.1Link to Protein Sequence:NP_001382784.1Re-query CCDS DB by Nucleotide ID:NM_001395855Re-query CCDS DB by Protein ID:NP_001382784Link to BLAST:NP_001382784.1

Chromosomal Locations for CCDS 92109.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 11927373 11927879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 11929240 11929275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 11929385 11929445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 11930450 11930551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 11933517 11933584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGAAGGTGACAACGAAAATCAACCATCATGACAAAATCAATGGAAAGAGGAAGACCGCCAAAAAACAGA
AACTAAGCGTGAAAGAATGTGAGCATGCAGAAAAGGAGAGGCAGGTGTCAGAGGCAGAGGAAAATGGGAA
ATTGGATATGAAAGAAATACACACCTACATGAAAATGTTTCAACGTGCGCAAGAGTTGCGGCGGCGGGCA
GAGGACTACCACAAATGCAAAATCCCCCCTTCTGCAAGAAAGGCTCTTTGCAACTGGGTCAGAATGGCGG
CAGCGGAGCATCGTCATTCTTCAGGATTGCCCTACTGGCCCTACCTCACAGCTGAAACTTTAAAAAACAG
GATGGGCCACCAGCCACCTCCTCCAACTCAACAACATTCTATAACTGATAACTCCCTGAGCCTCAAGACA
CCTCCCGAGTGTCTGCTCACTCCCCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTCCCGAGTGTC
TGCTCACTCCCCTTCCACCCTCAGCTCCACCCTCAGCGGATGATAATCTCAAGACACCTCCCTTAGCTAC
TCAGGAGGCTGAGGCAGAAAAACCACCCAAACCCAAGAGGTGGAGAGCGGCTGAGATGGAATCACCACCC
GAACCCAAGAGGCGGAGGGCCGCTGAGGTGGAATCACCACCCGAACCCAAGAGGCGGAGGGCCGCTGAGG
TGGAACCATCATCACCCGAGCCCAAGAGGCGGAGGTTGAGTAAGCTGAGAACAGGCCATTGCACTCAAGC
CTGA

Translation (257 aa):
MKVTTKINHHDKINGKRKTAKKQKLSVKECEHAEKERQVSEAEENGKLDMKEIHTYMKMFQRAQELRRRA
EDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKT
PPECLLTPLPPSADDNLKTPPECLLTPLPPSAPPSADDNLKTPPLATQEAEAEKPPKPKRWRAAEMESPP
EPKRRRAAEVESPPEPKRRRAAEVEPSSPEPKRRRLSKLRTGHCTQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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