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Report for CCDS92474.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92474.1 Public Homo sapiens 19 CIMAP1D 24 110 108 CCDS HistoryNCBI Gene:284451Re-query CCDS DB by CCDS ID:92474.1Re-query CCDS DB by GeneID:284451See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92474.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382696.7 ENSP00000372143.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382696.7Link to Ensembl Protein Viewer:ENSP00000372143.2Re-query CCDS DB by Nucleotide ID:ENST00000382696Re-query CCDS DB by Protein ID:ENSP00000372143
Original member Current member NCBI NM_001385597.1 NP_001372526.1 Accepted alive Link to Nucleotide Sequence:NM_001385597.1Link to Protein Sequence:NP_001372526.1Re-query CCDS DB by Nucleotide ID:NM_001385597Re-query CCDS DB by Protein ID:NP_001372526Link to BLAST:NP_001372526.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001372526.1 253 Q3SX64-2 253 100% 0 0

Chromosomal Locations for CCDS 92474.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 463844 464364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 467649 467762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 474621 474747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (762 nt):
ATGGGGACCCTCAGCTGCGACTCCACCCCACGGCTGGCCACAGCCCCCCTTGGCCGGCGAGTGACGGAGG
GCCAGATTCCGGAGACCGGCCTGAGGAAGTCCTGTGGGACGGCCACCCTGGAGAACGCACCACCTCAGGA
CACCAGCCCGGGCCCCATCTACTTCTTGGACCCCAAAGTCACACGCTTTGGCCGCAGCTGCACCCCTGCC
TACTCCATGCAGGGCCGGGCCAAGTCTCGGGGTCCGGAGGTGACGCCAGGCCCTGGGGCCTACAGCCCAG
AGAAGGTGCCCCCTGTGCGCCATCGGACACCGCCGGCTTTCACCCTGGGCTGCCGCCTCCCCCTGAAGCC
CCTGGACACCTCAGCCCCTGCCCCTAATGCCTACACCATGCCCCCTCTGTGGGGCTCACAGATCTTCACC
AAGCCCAGCAGCCCCAGCTACACGGTGGTGGGCCGCACCCCCCCCGCCCGCCCCCCGCAGGATCCTGCTG
AGATACCAGGCCCGGGCCAGTACGACAGCCCGGACGCAAACACCTACCGCCAGCGCCTGCCTGCCTTCAC
CATGCTGGGGCGGCCCCGGGCCCCGCGACCCCTGGAGGAGACCCCCGGCCCTGGCGCCCACTGCCCAGAG
CAGGTCACCGTGAACAAAGCCAGGGCTCCAGCGTTCTCTATGGGCATCCGCCACTCGAAACGGGCCAGCA
CCATGGCCGCCACCACGCCCTCCCGGCCTGCGGGGCACAGGCTGCCCGGCCGCTGCTGCTAG

Translation (253 aa):
MGTLSCDSTPRLATAPLGRRVTEGQIPETGLRKSCGTATLENAPPQDTSPGPIYFLDPKVTRFGRSCTPA
YSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFT
KPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPE
QVTVNKARAPAFSMGIRHSKRASTMAATTPSRPAGHRLPGRCC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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