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Report for CCDS92487.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92487.1 Public Homo sapiens 19 GIPC3 24 110 108 CCDS HistoryNCBI Gene:126326Re-query CCDS DB by CCDS ID:92487.1Re-query CCDS DB by GeneID:126326See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92487.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000644946.1 ENSP00000495068.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644946.1Link to Ensembl Protein Viewer:ENSP00000495068.1Re-query CCDS DB by Nucleotide ID:ENST00000644946Re-query CCDS DB by Protein ID:ENSP00000495068
Current member NCBI NM_001411144.1 NP_001398073.1 Accepted alive Link to Nucleotide Sequence:NM_001411144.1Link to Protein Sequence:NP_001398073.1Re-query CCDS DB by Nucleotide ID:NM_001411144Re-query CCDS DB by Protein ID:NP_001398073Link to BLAST:NP_001398073.1

Chromosomal Locations for CCDS 92487.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 3585598 3585822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3586495 3586680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3586814 3586994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3589443 3589555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3589831 3589925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3590039 3593288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4050 nt):
ATGGAGGGAGCAGCGGCCCGGGAGGCCCGGGGGACCGAGACCCCGCGCGCGTCTGCGCCCCCGCCCGCGC
CCTCGGAGCCCCCGGCCGCGCCCCGCGCCCGCCCGCGCCTCGTCTTCCGCACGCAGCTGGCGCACGGGAG
CCCCACGGGCAAGATCGAGGGCTTCACCAACGTCCGCGAGCTGTACGCCAAGATCGCCGAAGCCTTCGGG
ATCGCGCCCACCGAGATTTTATTCTGCACCCTCAACAGCCACAAAGTGGACATGCAGAAGCTCCTGGGGG
GTCAGATAGGCCTGGAGGACTTCATCTTTGCCCACGTGCGAGGCGAGACCAAGGAGGTGGAGGTCACTAA
GACAGAGGATGCTCTGGGGCTGACCATCACGGACAACGGGGCTGGCTACGCCTTCATCAAGAGAATCAAG
GAAGGCAGTATCATCAACCGGATCGAGGCAGTGTGCGTGGGTGACAGCATCGAAGCCATCAACGACCACT
CCATTGTGGGCTGCCGCCACTACGAGGTGGCCAAGATGCTCCGGGAGCTGCCCAAGTCCCAGCCCTTCAC
CCTGCGCCTGGTGCAGCCCAAGAGGGCCTTCGATATGATTGGCCAGAGAAGTCGGTCCAGCAAATGTCCA
GTAGAGGCGAAAGTGACCAGCGGGAGGGAGACCCTGCGGCTTCGTTCTGGGGGGGCTGCCACAGTGGAGG
AAGCGCCCAGTGAGTTTGAGGAGGAGGCATCTCGGAAGGTTGATGACCTGCTGGAAAGCTACATGGGCAT
TCGGGACCCCGAGCTGGGTAAGGGGCCAGGCGTCCACCATGGTGGAGACGTCCAAGAAGACAGCGAGCGC
CCAGGAGTTTGCACGCTGTTTAGACTCCGTCTTGGGCGAGTTCGCCTTCCCCGACGAGTTTGTGGTGGAA
GTGTGGGCCGCCATCGGCGAGGCCAGAGAGGCCTGTGGCTAGTTTGCCCTGGGGGGGCCCAGCACAGCCC
CAGCCCGGAGCCCAGCCCCCTGCCCCGGCCCTGCTCCAGAACCCAGCCCAGATCGGAGGACAAGTTCCTC
TCTAGAACCCAATCCAATTTGGAGCCCCAGCCCAACTCCAGAACCCAACCCTTCTCTAGAATCCAGCCCA
GATCTGAGGCCAAGCTATGTGCTAGAGCCCAGGCCAGCTCTGAGACCAAGCCCAGCATTGAGAATAAGCT
CTGTTCTAAAACTCAGGCCAGCCCTGAGACCAAGCCCAGCTCTAGAACTCAGATGAGCTTTGAGACCATG
CCCAGCACTGAGACCAAGCCCTGTTCTAGAACTCAGGCCTGCTCTGAGGCCAAGCCCAGCTCTAGAACCC
AGATGAGCTCTGAGACCATGCCCAGCTCTAGAACTCAGATGGGCTCTGAGACCATGCCCAGCTCTAGAAC
TCAGATGGGCTCTGAGACCGAGCCCAGCTCTAGAACTCAGATGGGCTCTGAGACCGAGCCCAGCTCTAAA
ACTCAGATGGGCTCTGAGACCATGCCCAGCTCTAGAACTCAGATGGGCTCTGAGACCGAGCCCAGCTCTA
GAACTCAGATGGGCTCTGAGACCGAGCCCAGCTCTAGAACTCAGATGGGCTCTGAGACCATGCCCAGCTC
TAGAACTCAGATGGGCTCCGAGACCAAGCCCAGCTCTAGAACCCAGATGAGCTCTGAGACCATGCCCAGC
TCTAGAACTCAGATGAGCTCTGAGACAGAGCCCAGTATTGAGACCAAGCCCTGTTCTAGAGTCCAGGCCA
GCTCCGAGACCAAGCCCAGCTCTAGAACCCAGATAAGCTCTGAAACCAAGCCCAGCATAGAGACCAAGCC
GTGTTCTAGAATTCAGGCCACATCTGAAGCCAAGCCCAGCTCTAGAACTCAGGTCAGCCCTGAGACCAAG
CCCAGCTCTAGAACCCAGATAAGCTCTGAAACCAATCCCAGCATTGAGACCAAGCCCTGTTCTAGAACTC
AGGCCACCTCTGAGGCCAAACCCAGCTCTAGAACCCAGATAAGATCTGAGACCAAGCCCTGCTCTGAAGC
CCAGGCCAGCTCTGAGACGAAGCACATCTCTAGAATCCAGCTGAGCCCTGACAACAAGCCAAACTCTGGA
ACCCAGACACATTTTAAGACCCAGACCAGCTTGGAGACCAATCCCAGTTCCAGAATCCAGGCTAGCTCGG
AGACCAAGCCCTGCTGGAAAACTCAAGCTGACTCTGGAACTCTGGACAGCTCCACGATGCAGCCACACCT
GGACACTCGGTCTAGCTCCGGAACCCCAGTTAATTTTGGAACCCATGTGAGATTCATGAAGCAGCCCAGC
TCTGGAACCCCAGTCAGCTCAGGATTCAGAGACAGCTCCCAAATCAAATCCTATTCAAGAACTCAGACCA
GCTCAGAAACCCAGGTCCACACGGCTGCCCAGTCCAGATCCCAACCCCAGTTGCATCCAAGTGCCCATCC
CCATCCTGCAGCCCAGTCCAGCTCCAGTGATGATTCCAGCTCTGAGACTGAGCCCAGCTCTAGAACCTCG
CCTAGTGCTACAACCAGGCCCAACTCCAGGATTCAGACCAGCTCTGGAACCCCATCCATCTTGGAAGCAA
GACCCAGCTCCAGCACACAGCTTGGTGCCAAGCCCCACTCTCCTTGCACAATGCAGCTCAGCTCTAGAAT
GCAGTTTACTTCCAGGACCCAGACCAATTTCAAGGCCTGGCCAAGCTCCAGAGCTCAATCCAGCCCAAGC
ACCGCACCCAGCTCTGGAACTCAGCTCAGTTCTGGAGCACAGGCTGGTTCTGAAATCCCAGCCAGCTCCA
AAACACAGACAGCAGCTGAGACCCAGCCAAGTTCCAGAATCCAGCTAAGCTCTGGAGTCCAATCTAGTCC
TGGGACCCAGGCCATCGCAGCAATAGAATTAAGCTCCACAGCCCTGTCTAGTTCCGACAGCAGGTCCAGC
TCCAGGACCCAGCGCTGCCCAGGAGCTCGACCAGCCTCTGGGACTCAATTCGCCTCTAAAACCCTGCCAG
GTTCTAGATACCAGCTCCAGACCACAGCCCCAGACAGCTCTGGTATTCAACTGGACTTTGGGAAGCAGAG
CAGTTCTGAAAGTCAGCTTAGCTTTGGAACTCAGCCCAGCTCTGGGACCCAGATAAGCTCAAGAATTCAA
GCCAGCTCTGGAAGTCAGCTTAGTTCGGGAACCCAGCTGATTTCCGGAGCCCAACCCAGCTCCAGAACTC
AGACTAGTTCTGGAAACCAGCTCAGCTCCGGGACCCAGACCACTGCAAGAATTCAGCTCAGCCCTGGAGC
TCATCTTAGCTCCAGAACCCAGTCCAGTCCTGAGACCAGGCTCAGCTCTGAGGCTCAGTCCAGCTCTGGA
ACCCAGTTCAGTTCTGGGATTCAGTTTGGCTCTGAAACCCAGACCGGCTCAAGAATTCAGCCCGACTCTG
GAGCCCAACTTAGTTCCAGAACCCAGTCCAGCTCTGAGACCGGGCTCAGCTCTGAAACCCAGACCGGCTC
AAGAATTCAGCCCAGCCCTGGAGCCCACCTTAGTTCTGGAACCCAGCCTGTTTCTGGAACCCAATCCAGT
TCCAGAACTCACACCAGTTCAAGAATCTGGCTGAGCCCTGGAAATGGAATCTGCCCACAGACCCCTGGCC
TTGACCCTAGAATCCAGCTTGAGGCCCCTGCCCCAGCCCAACCTCAGCCCCCAGGCCCATCCCCCAGAGA
CCCCACCCCAGCCCCTAGCAAAGACCCCCAGCCTCTGCCTCAGCCCCATGATCAGGTATGTGGCATCCAG
GCCAGCCTTGGCCCCATCCCAGGCTTACCCCAAGCCTCCTACCTGGCCCCACAGTCACAGGTCTCCTCAA
CCCCCCAGAAGCCAGCCGTCTCTCCCAAGCCCCGGGTGGGACCCCAGAAGTCCACCCCACCCACCATATC
TGTCACTCCTAGTCCTGCCCCTAGGGCAGCCCTCCTGAGTTCCCAGCTGTCTGAGTCCCCAGCTTTGGCG
CCAGCCCTTTGCCCCACTCTGGGGGAGCCAGGAGCCCGCCCTTACCGCGGGGGGCCGTAG

Translation (1349 aa):
MEGAAAREARGTETPRASAPPPAPSEPPAAPRARPRLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFG
IAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIK
EGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCP
VEAKVTSGRETLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMGIRDPELGKGPGVHHGGDVQEDSER
PGVCTLFRLRLGRVRLPRRVCGGSVGRHRRGQRGLWLVCPGGAQHSPSPEPSPLPRPCSRTQPRSEDKFL
SRTQSNLEPQPNSRTQPFSRIQPRSEAKLCARAQASSETKPSIENKLCSKTQASPETKPSSRTQMSFETM
PSTETKPCSRTQACSEAKPSSRTQMSSETMPSSRTQMGSETMPSSRTQMGSETEPSSRTQMGSETEPSSK
TQMGSETMPSSRTQMGSETEPSSRTQMGSETEPSSRTQMGSETMPSSRTQMGSETKPSSRTQMSSETMPS
SRTQMSSETEPSIETKPCSRVQASSETKPSSRTQISSETKPSIETKPCSRIQATSEAKPSSRTQVSPETK
PSSRTQISSETNPSIETKPCSRTQATSEAKPSSRTQIRSETKPCSEAQASSETKHISRIQLSPDNKPNSG
TQTHFKTQTSLETNPSSRIQASSETKPCWKTQADSGTLDSSTMQPHLDTRSSSGTPVNFGTHVRFMKQPS
SGTPVSSGFRDSSQIKSYSRTQTSSETQVHTAAQSRSQPQLHPSAHPHPAAQSSSSDDSSSETEPSSRTS
PSATTRPNSRIQTSSGTPSILEARPSSSTQLGAKPHSPCTMQLSSRMQFTSRTQTNFKAWPSSRAQSSPS
TAPSSGTQLSSGAQAGSEIPASSKTQTAAETQPSSRIQLSSGVQSSPGTQAIAAIELSSTALSSSDSRSS
SRTQRCPGARPASGTQFASKTLPGSRYQLQTTAPDSSGIQLDFGKQSSSESQLSFGTQPSSGTQISSRIQ
ASSGSQLSSGTQLISGAQPSSRTQTSSGNQLSSGTQTTARIQLSPGAHLSSRTQSSPETRLSSEAQSSSG
TQFSSGIQFGSETQTGSRIQPDSGAQLSSRTQSSSETGLSSETQTGSRIQPSPGAHLSSGTQPVSGTQSS
SRTHTSSRIWLSPGNGICPQTPGLDPRIQLEAPAPAQPQPPGPSPRDPTPAPSKDPQPLPQPHDQVCGIQ
ASLGPIPGLPQASYLAPQSQVSSTPQKPAVSPKPRVGPQKSTPPTISVTPSPAPRAALLSSQLSESPALA
PALCPTLGEPGARPYRGGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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