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Report for CCDS92508.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92508.1 Public Homo sapiens 19 ZNF846 24 110 108 CCDS HistoryNCBI Gene:162993Re-query CCDS DB by CCDS ID:92508.1Re-query CCDS DB by GeneID:162993See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92508.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000588267.5 ENSP00000465467.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588267.5Link to Ensembl Protein Viewer:ENSP00000465467.1Re-query CCDS DB by Nucleotide ID:ENST00000588267Re-query CCDS DB by Protein ID:ENSP00000465467
Original member Current member EBI ENST00000592859.1 ENSP00000467891.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000592859.1Link to Ensembl Protein Viewer:ENSP00000467891.1Re-query CCDS DB by Nucleotide ID:ENST00000592859Re-query CCDS DB by Protein ID:ENSP00000467891
Original member Current member NCBI NM_001395839.1 NP_001382768.1 Accepted alive Link to Nucleotide Sequence:NM_001395839.1Link to Protein Sequence:NP_001382768.1Re-query CCDS DB by Nucleotide ID:NM_001395839Re-query CCDS DB by Protein ID:NP_001382768Link to BLAST:NP_001382768.1
Original member Current member NCBI NM_001395840.1 NP_001382769.1 Accepted alive Link to Nucleotide Sequence:NM_001395840.1Link to Protein Sequence:NP_001382769.1Re-query CCDS DB by Nucleotide ID:NM_001395840Re-query CCDS DB by Protein ID:NP_001382769Link to BLAST:NP_001382769.1
Original member Current member NCBI NM_001395841.1 NP_001382770.1 Accepted alive Link to Nucleotide Sequence:NM_001395841.1Link to Protein Sequence:NP_001382770.1Re-query CCDS DB by Nucleotide ID:NM_001395841Re-query CCDS DB by Protein ID:NP_001382770Link to BLAST:NP_001382770.1
Original member Current member NCBI NM_001395842.1 NP_001382771.1 Accepted alive Link to Nucleotide Sequence:NM_001395842.1Link to Protein Sequence:NP_001382771.1Re-query CCDS DB by Nucleotide ID:NM_001395842Re-query CCDS DB by Protein ID:NP_001382771Link to BLAST:NP_001382771.1
Original member Current member NCBI NM_001395843.1 NP_001382772.1 Accepted alive Link to Nucleotide Sequence:NM_001395843.1Link to Protein Sequence:NP_001382772.1Re-query CCDS DB by Nucleotide ID:NM_001395843Re-query CCDS DB by Protein ID:NP_001382772Link to BLAST:NP_001382772.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382768.1 210 Q147U1-3 210 100% 0 0
NP_001382769.1 210 Q147U1-3 210 100% 0 0
NP_001382770.1 210 Q147U1-3 210 100% 0 0
NP_001382771.1 210 Q147U1-3 210 100% 0 0
NP_001382772.1 210 Q147U1-3 210 100% 0 0

Chromosomal Locations for CCDS 92508.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 9752439 9752440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9758059 9758689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGACTCACATGATAACTCACATTGGAGAGAAAACTTCTGAGGATAATCAGAGTGGAAAAGCCTTAAGAA
AGAACTTTCCTCATAGTTTTTACAAGAAAAGTCATGCTGAGGGGAAAATGCCTAAGTGTGTTAAACATGA
AAAAGCCTTCAACCAGTTTCCAAATCTTACTAGGCAGAATAAAACTCACACACAAGAGAAATTGTGTGAA
TGCAAAGACTGTTGGAGAACTTTTCTTAATCAGTCATCCCTTAAGTTACATATAAGATCTCACAATGGAG
ACAAACACTATGTATGTAAGGAATGTGGGAAAGCCTTCAGTAATTCCTCACACCTTATAGGACATGGAAG
AATTCACAGTGGAGAGAAGCCCTATGTCTGTAAAGAATGTGGTAAAGCTTTCACTCAATCCACAGGACTT
AAATTACACATCAGAACTCACAGTGGAGAAAAACCATATAAATGTAAAGAGTGTGGGAAAGCCTTCACCC
ATTCTTCATACCTTACTGATCATACAAGAATCCACAGTGGAAAGAAGCCCTATGTATGTATGGAATGTGG
AAAAGCCTTCACTAGATCCACAGGACTTATTTTACACATGCGAATTCACACTGGAGAAAAGCCATATGAA
TAG

Translation (210 aa):
MTHMITHIGEKTSEDNQSGKALRKNFPHSFYKKSHAEGKMPKCVKHEKAFNQFPNLTRQNKTHTQEKLCE
CKDCWRTFLNQSSLKLHIRSHNGDKHYVCKECGKAFSNSSHLIGHGRIHSGEKPYVCKECGKAFTQSTGL
KLHIRTHSGEKPYKCKECGKAFTHSSYLTDHTRIHSGKKPYVCMECGKAFTRSTGLILHMRIHTGEKPYE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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