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Report for CCDS92636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92636.1 Public Homo sapiens 19 PSG9 24 110 108 CCDS HistoryNCBI Gene:5678Re-query CCDS DB by CCDS ID:92636.1Re-query CCDS DB by GeneID:5678See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92636.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244293.11 ENSP00000244293.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000244293.11Link to Ensembl Protein Viewer:ENSP00000244293.7Re-query CCDS DB by Nucleotide ID:ENST00000244293Re-query CCDS DB by Protein ID:ENSP00000244293
Current member NCBI NM_001411075.1 NP_001398004.1 Accepted alive Link to Nucleotide Sequence:NM_001411075.1Link to Protein Sequence:NP_001398004.1Re-query CCDS DB by Nucleotide ID:NM_001411075Re-query CCDS DB by Protein ID:NP_001398004Link to BLAST:NP_001398004.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001398004.1 402 Q00887-2 402 100% 0 0

Chromosomal Locations for CCDS 92636.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43257957 43258456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43261860 43262138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43267784 43268149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43269368 43269431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGGGGCCCCTCCCAGCCCCTTCCTGCACACAGCGCATCACCTGGAAGGGGCTCCTGCTCACAGCATCAC
TTTTAAACTTCTGGAACCCGCCCACCACTGCCGAAGTCACGATTGAAGCCCAGCCACCCAAAGTTTCTGA
GGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTCCTGGCTACTTCTGGTACAAAGGG
GAAATGACGGACCTCTACCATTACATTATATCGTATATAGTTGATGGTAAAATAATTATATATGGGCCTG
CATACAGTGGAAGAGAAACAGTATATTCCAACGCATCCCTGCTGATCCAGAATGTCACCCGGAAGGATGC
AGGAACCTACACCTTACACATCATAAAGCGAGGTGATGAGACTAGAGAAGAAATTCGACATTTCACCTTC
ACCTTATACTTGGAGACTCCCAAGCCCTACATCTCCAGCAGCAACTTAAACCCCAGGGAGGCCATGGAGG
CTGTGCGCTTAATCTGTGATCCTGAGACTCTGGACGCAAGCTACCTATGGTGGATGAATGGTCAGAGCCT
CCCTGTGACTCACAGGTTGCAGCTGTCCAAAACCAACAGGACCCTCTATCTATTTGGTGTCACAAAGTAT
ATTGCAGGACCCTATGAATGTGAAATACGGAACCCAGTGAGTGCCAGTCGCAGTGACCCAGTCACCCTGA
ATCTCCTCCATGGTCCAGACCTCCCCAGAATTTACCCTTCATTCACCTATTACCGTTCAGGAGAAAACCT
CGACTTGTCCTGCTTCACGGAATCTAACCCACCGGCAGAGTATTTTTGGACAATTAATGGGAAGTTTCAG
CAATCAGGACAAAAGCTCTTTATCCCCCAAATTACTAGAAATCATAGCGGGCTCTATGCTTGCTCTGTTC
ATAACTCAGCCACTGGCAAGGAAATCTCCAAATCCATGACAGTCAAAGTCTCTGGTAAGTGGATCCCAGC
ATCCTTGGCAGTAGGGTTTTATGTGGAGTCTATCTGGCTTTCAGAGAAGAGTCAGGAAAACATTTTTATT
CCCAGCCTGTGTCCCATGGGCACAAGCAAATCCCAAATTCTCCTCCTGAACCCTCCCAATTTGTCTCTAC
AGACTCTCTTCTCCTTGTTTTTCTGTTTTCTTATGGCTGACCTTGTGTCTGGCCTGAAAAAGGTAGGGAG
GGGGCTTTATCAGCCCTGA

Translation (402 aa):
MGPLPAPSCTQRITWKGLLLTASLLNFWNPPTTAEVTIEAQPPKVSEGKDVLLLVHNLPQNLPGYFWYKG
EMTDLYHYIISYIVDGKIIIYGPAYSGRETVYSNASLLIQNVTRKDAGTYTLHIIKRGDETREEIRHFTF
TLYLETPKPYISSSNLNPREAMEAVRLICDPETLDASYLWWMNGQSLPVTHRLQLSKTNRTLYLFGVTKY
IAGPYECEIRNPVSASRSDPVTLNLLHGPDLPRIYPSFTYYRSGENLDLSCFTESNPPAEYFWTINGKFQ
QSGQKLFIPQITRNHSGLYACSVHNSATGKEISKSMTVKVSGKWIPASLAVGFYVESIWLSEKSQENIFI
PSLCPMGTSKSQILLLNPPNLSLQTLFSLFFCFLMADLVSGLKKVGRGLYQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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