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Report for CCDS92698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92698.1 Public Homo sapiens 19 ZNF530 24 110 108 CCDS HistoryNCBI Gene:348327Re-query CCDS DB by CCDS ID:92698.1Re-query CCDS DB by GeneID:348327See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92698.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000597700.6 ENSP00000472024.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000597700.6Link to Ensembl Protein Viewer:ENSP00000472024.2Re-query CCDS DB by Nucleotide ID:ENST00000597700Re-query CCDS DB by Protein ID:ENSP00000472024
Original member Current member NCBI NM_001321981.2 NP_001308910.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321981.2Link to Protein Sequence:NP_001308910.1Re-query CCDS DB by Nucleotide ID:NM_001321981Re-query CCDS DB by Protein ID:NP_001308910Link to BLAST:NP_001308910.1
Original member Current member NCBI NM_001387561.1 NP_001374490.1 Accepted alive Link to Nucleotide Sequence:NM_001387561.1Link to Protein Sequence:NP_001374490.1Re-query CCDS DB by Nucleotide ID:NM_001387561Re-query CCDS DB by Protein ID:NP_001374490Link to BLAST:NP_001374490.1

Chromosomal Locations for CCDS 92698.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57604346 57604406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57605686 57607325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1701 nt):
ATGCAGAGGCTCCTGTACCGCGATGTGATGCTGGAGAACTTTGCAGTTATGGCATCCCTAGGTTGCTGGT
GT
GGAGCAGTAGATGAGGGGACGCCTTCTGCAGAGAGCGTTTCTGTGGAAGAACTGTCACAGGGCAGGAC
T
CCAAAGGCAGATACATCCACTGATAAGAGTCACCCCTGTGAGATTTGTACCCCAGTCCTGAGAGACATT
TTA
CAAATGATTGAGCTCCATGCCTCACCCTGTGGACAGAAATTGTACTTGGGTGGAGCATCAAGAGATT
TC
TGGATGAGTTCAAACCTTCACCAGCTCCAGAAGCTTGATAATGGAGAGAAGCTCTTTAAAGTGGATGG
G
GACCAGGCCTCATTTATGATGAACTGCAGGTTCCATGTGTCAGGAAAACCCTTCACGTTTGGGGAAGTC
GGG
AGGGACTTTTCAGCCACCTCAGGACTTCTCCAGCATCAGGTGACTCCCACCATTGAGAGACCACACA
GC
AGGATTAGACACTTGAGAGTTCCCACTGGACGAAAGCCTCTCAAATACACTGAATCCAGGAAATCTTT
T
AGAGAGAAATCTGTATTCATTCAACACCAAAGAGCTGACTCTGGAGAAAGGCCTTACAAGTGCAGTGAA
TGT
GGGAAATCCTTTAGTCAAAGTTCTGGCTTTCTTCGACACAGGAAAGCACACGGTAGAACAAGGACTC
AT
GAATGTAGTGAATGTGGGAAATCATTTAGTCGCAAAACTCACCTAACTCAACACCAAAGAGTTCACAC
T
GGAGAAAGGCCTTATGACTGCAGTGAATGTGGCAAATCCTTTCGCCAGGTATCTGTCCTCATTCAACAT
CAA
CGAGTTCACACTGGAGAAAGGCCTTATGAGTGCAGTGAATGTGGGAAATCTTTTAGCCACAGCACTA
AC
CTCTATCGTCACAGGAGTGCCCACACTAGCACAAGGCCTTATGAGTGCAGTGAATGTGGAAAATCCTT
T
AGCCATAGCACTAACCTCTTTCGACACTGGAGAGTTCACACTGGAGTAAGGCCTTATGAGTGTAGTGAA
TGT
GGGAAAGCATTTAGTTGCAATATCTACCTTATTCACCACCAAAGATTTCACACTGGAGAAAGACCTT
AT
GTGTGCAGTGAATGTGGGAAATCATTTGGCCAGAAATCTGTCCTCATTCAACACCAAAGAGTTCACAC
T
GGAGAAAGGCCTTATGAGTGCAGTGAATGTGGGAAAGTTTTTAGCCAAAGCTCTGGCCTCTTTCGACAC
AGA
AGAGCTCACACTAAAACAAAGCCTTATGAGTGCAGTGAATGTGAAAAATCATTTAGTTGCAAAACTG
AC
CTCATTCGACACCAGACAGTTCACACTGGAGAAAGGCCTTATGAGTGCAGTGTATGTGGGAAATCTTT
T
ATCCGAAAAACCCACCTCATTCGACACCAGACTGTTCACACTAATGAAAGGCCTTATGAGTGCGATGAA
TGT
GGGAAATCCTATAGCCAAAGCTCTGCCCTCCTTCAGCATAGGAGAGTTCACACTGGAGAAAGGCCTT
AT
GAGTGCAGAGAATGTGGGAAATCTTTTACCCGCAAAAATCACCTCATTCAACACAAGACAGTTCACAC
T
GGAGAAAGGCCTTATGAATGCAGTGAATGTGGAAAATCCTTTAGCCAAAGCTCTGGCCTCTTAAGACAC
AGA
AGAGTTCATGTGCAGTGA


Translation (566 aa):
MQRLLYRDVMLENFAVMASLGCWCGAVDEGTPSAESVSVEELSQGRTPKADTSTDKSHPCEICTPVLRDI
L
QMIELHASPCGQKLYLGGASRDFWMSSNLHQLQKLDNGEKLFKVDGDQASFMMNCRFHVSGKPFTFGEV
G
RDFSATSGLLQHQVTPTIERPHSRIRHLRVPTGRKPLKYTESRKSFREKSVFIQHQRADSGERPYKCSE
C
GKSFSQSSGFLRHRKAHGRTRTHECSECGKSFSRKTHLTQHQRVHTGERPYDCSECGKSFRQVSVLIQH
Q
RVHTGERPYECSECGKSFSHSTNLYRHRSAHTSTRPYECSECGKSFSHSTNLFRHWRVHTGVRPYECSE
C
GKAFSCNIYLIHHQRFHTGERPYVCSECGKSFGQKSVLIQHQRVHTGERPYECSECGKVFSQSSGLFRH
R
RAHTKTKPYECSECEKSFSCKTDLIRHQTVHTGERPYECSVCGKSFIRKTHLIRHQTVHTNERPYECDE
C
GKSYSQSSALLQHRRVHTGERPYECRECGKSFTRKNHLIQHKTVHTGERPYECSECGKSFSQSSGLLRH
R
RVHVQ




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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