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Report for CCDS92862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92862.1 Public Homo sapiens 2 GPR17 24 110 108 CCDS HistoryNCBI Gene:2840Re-query CCDS DB by CCDS ID:92862.1Re-query CCDS DB by GeneID:2840See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92862.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000486700.2 ENSP00000508383.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000486700.2Link to Ensembl Protein Viewer:ENSP00000508383.1Re-query CCDS DB by Nucleotide ID:ENST00000486700Re-query CCDS DB by Protein ID:ENSP00000508383
Original member Current member NCBI NM_001161416.2 NP_001154888.1 Accepted alive Link to Nucleotide Sequence:NM_001161416.2Link to Protein Sequence:NP_001154888.1Re-query CCDS DB by Nucleotide ID:NM_001161416Re-query CCDS DB by Protein ID:NP_001154888Link to BLAST:NP_001154888.1
Original member Current member NCBI NM_001161417.2 NP_001154889.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001161417.2Link to Protein Sequence:NP_001154889.1Re-query CCDS DB by Nucleotide ID:NM_001161417Re-query CCDS DB by Protein ID:NP_001154889Link to BLAST:NP_001154889.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001154888.1 339 Q13304-2 339 100% 0 0
NP_001154889.1 339 Q13304-2 339 100% 0 0

Chromosomal Locations for CCDS 92862.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 127650736 127651755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1020 nt):
ATGAATGGCCTTGAAGTGGCTCCCCCAGGTCTGATCACCAACTTCTCCCTGGCCACGGCAGAGCAATGTG
GCCAGGAGACGCCACTGGAGAACATGCTGTTCGCCTCCTTCTACCTTCTGGATTTTATCCTGGCTTTAGT
TGGCAATACCCTGGCTCTGTGGCTTTTCATCCGAGACCACAAGTCCGGGACCCCGGCCAACGTGTTCCTG
ATGCATCTGGCCGTGGCCGACTTGTCGTGCGTGCTGGTCCTGCCCACCCGCCTGGTCTACCACTTCTCTG
GGAACCACTGGCCATTTGGGGAAATCGCATGCCGTCTCACCGGCTTCCTCTTCTACCTCAACATGTACGC
CAGCATCTACTTCCTCACCTGCATCAGCGCCGACCGTTTCCTGGCCATTGTGCACCCGGTCAAGTCCCTC
AAGCTCCGCAGGCCCCTCTACGCACACCTGGCCTGTGCCTTCCTGTGGGTGGTGGTGGCTGTGGCCATGG
CCCCGCTGCTGGTGAGCCCACAGACCGTGCAGACCAACCACACGGTGGTCTGCCTGCAGCTGTACCGGGA
GAAGGCCTCCCACCATGCCCTGGTGTCCCTGGCAGTGGCCTTCACCTTCCCGTTCATCACCACGGTCACC
TGCTACCTGCTGATCATCCGCAGCCTGCGGCAGGGCCTGCGTGTGGAGAAGCGCCTCAAGACCAAGGCAG
TGCGCATGATCGCCATAGTGCTGGCCATCTTCCTGGTCTGCTTCGTGCCCTACCACGTCAACCGCTCCGT
CTACGTGCTGCACTACCGCAGCCATGGGGCCTCCTGCGCCACCCAGCGCATCCTGGCCCTGGCAAACCGC
ATCACCTCCTGCCTCACCAGCCTCAACGGGGCACTCGACCCCATCATGTATTTCTTCGTGGCTGAGAAGT
TCCGCCACGCCCTGTGCAACTTGCTCTGTGGCAAAAGGCTCAAGGGCCCGCCCCCCAGCTTCGAAGGGAA
AACCAACGAGAGCTCGCTGAGTGCCAAGTCAGAGCTGTGA

Translation (339 aa):
MNGLEVAPPGLITNFSLATAEQCGQETPLENMLFASFYLLDFILALVGNTLALWLFIRDHKSGTPANVFL
MHLAVADLSCVLVLPTRLVYHFSGNHWPFGEIACRLTGFLFYLNMYASIYFLTCISADRFLAIVHPVKSL
KLRRPLYAHLACAFLWVVVAVAMAPLLVSPQTVQTNHTVVCLQLYREKASHHALVSLAVAFTFPFITTVT
CYLLIIRSLRQGLRVEKRLKTKAVRMIAIVLAIFLVCFVPYHVNRSVYVLHYRSHGASCATQRILALANR
ITSCLTSLNGALDPIMYFFVAEKFRHALCNLLCGKRLKGPPPSFEGKTNESSLSAKSEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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