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Report for CCDS9553.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9553.1 Public Homo sapiens 14 RNASE11 24 110 108 CCDS HistoryNCBI Gene:122651Re-query CCDS DB by CCDS ID:9553.1Re-query CCDS DB by GeneID:122651See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9553.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398008.6 ENSP00000381092.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398008.6Link to Ensembl Protein Viewer:ENSP00000381092.2Re-query CCDS DB by Nucleotide ID:ENST00000398008Re-query CCDS DB by Protein ID:ENSP00000381092
Original member Current member EBI ENST00000398009.6 ENSP00000381093.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398009.6Link to Ensembl Protein Viewer:ENSP00000381093.2Re-query CCDS DB by Nucleotide ID:ENST00000398009Re-query CCDS DB by Protein ID:ENSP00000381093
Original member Current member EBI ENST00000432835.6 ENSP00000395210.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432835.6Link to Ensembl Protein Viewer:ENSP00000395210.2Re-query CCDS DB by Nucleotide ID:ENST00000432835Re-query CCDS DB by Protein ID:ENSP00000395210
Original member Current member EBI ENST00000553849.1 ENSP00000451318.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000553849.1Link to Ensembl Protein Viewer:ENSP00000451318.1Re-query CCDS DB by Nucleotide ID:ENST00000553849Re-query CCDS DB by Protein ID:ENSP00000451318
Original member Current member EBI ENST00000555841.5 ENSP00000451563.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555841.5Link to Ensembl Protein Viewer:ENSP00000451563.1Re-query CCDS DB by Nucleotide ID:ENST00000555841Re-query CCDS DB by Protein ID:ENSP00000451563
Original member Current member NCBI NM_001394189.1 NP_001381118.1 Accepted alive Link to Nucleotide Sequence:NM_001394189.1Link to Protein Sequence:NP_001381118.1Re-query CCDS DB by Nucleotide ID:NM_001394189Re-query CCDS DB by Protein ID:NP_001381118Link to BLAST:NP_001381118.1
Original member Current member NCBI NM_001394190.1 NP_001381119.1 Accepted alive Link to Nucleotide Sequence:NM_001394190.1Link to Protein Sequence:NP_001381119.1Re-query CCDS DB by Nucleotide ID:NM_001394190Re-query CCDS DB by Protein ID:NP_001381119Link to BLAST:NP_001381119.1
Original member Current member NCBI NM_001394191.1 NP_001381120.1 Accepted alive Link to Nucleotide Sequence:NM_001394191.1Link to Protein Sequence:NP_001381120.1Re-query CCDS DB by Nucleotide ID:NM_001394191Re-query CCDS DB by Protein ID:NP_001381120Link to BLAST:NP_001381120.1
Original member Current member NCBI NM_001394192.1 NP_001381121.1 Accepted alive Link to Nucleotide Sequence:NM_001394192.1Link to Protein Sequence:NP_001381121.1Re-query CCDS DB by Nucleotide ID:NM_001394192Re-query CCDS DB by Protein ID:NP_001381121Link to BLAST:NP_001381121.1
Original member Current member NCBI NM_001394193.1 NP_001381122.1 Accepted alive Link to Nucleotide Sequence:NM_001394193.1Link to Protein Sequence:NP_001381122.1Re-query CCDS DB by Nucleotide ID:NM_001394193Re-query CCDS DB by Protein ID:NP_001381122Link to BLAST:NP_001381122.1
Original member Current member NCBI NM_001394194.1 NP_001381123.1 Accepted alive Link to Nucleotide Sequence:NM_001394194.1Link to Protein Sequence:NP_001381123.1Re-query CCDS DB by Nucleotide ID:NM_001394194Re-query CCDS DB by Protein ID:NP_001381123Link to BLAST:NP_001381123.1
Original member Current member NCBI NM_001394195.1 NP_001381124.1 Accepted alive Link to Nucleotide Sequence:NM_001394195.1Link to Protein Sequence:NP_001381124.1Re-query CCDS DB by Nucleotide ID:NM_001394195Re-query CCDS DB by Protein ID:NP_001381124Link to BLAST:NP_001381124.1
Original member Current member NCBI NM_001394196.1 NP_001381125.1 Accepted alive Link to Nucleotide Sequence:NM_001394196.1Link to Protein Sequence:NP_001381125.1Re-query CCDS DB by Nucleotide ID:NM_001394196Re-query CCDS DB by Protein ID:NP_001381125Link to BLAST:NP_001381125.1
Original member Current member NCBI NM_145250.5 NP_660293.1 Accepted alive Link to Nucleotide Sequence:NM_145250.5Link to Protein Sequence:NP_660293.1Re-query CCDS DB by Nucleotide ID:NM_145250Re-query CCDS DB by Protein ID:NP_660293Link to BLAST:NP_660293.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381118.1 199 Q8TAA1 199 100% 0 0
NP_001381119.1 199 Q8TAA1 199 100% 0 0
NP_001381120.1 199 Q8TAA1 199 100% 0 0
NP_001381121.1 199 Q8TAA1 199 100% 0 0
NP_001381122.1 199 Q8TAA1 199 100% 0 0
NP_001381123.1 199 Q8TAA1 199 100% 0 0
NP_001381124.1 199 Q8TAA1 199 100% 0 0
NP_001381125.1 199 Q8TAA1 199 100% 0 0
NP_660293.1 199 Q8TAA1 199 100% 0 0

Chromosomal Locations for CCDS 9553.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20583875 20584474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGGAGACCTTTCCTCTGCTGCTGCTCAGCCTGGGCCTGGTTCTTGCAGAAGCATCAGAAAGCACAATGA
AGATAATTAAAGAAGAATTTACAGACGAAGAGATGCAATATGACATGGCAAAAAGTGGCCAAGAAAAACA
GACCATTGAGATATTAATGAACCCGATCCTGTTAGTTAAAAATACCAGCCTCAGCATGTCCAAGGATGAT
ATGTCTTCCACATTACTGACATTCAGAAGTTTACATTATAATGACCCCAAGGGAAACAGTTCGGGTAATG
ACAAAGAGTGTTGCAATGACATGACAGTCTGGAGAAAAGTTTCAGAAGCAAACGGATCGTGCAAGTGGAG
CAATAACTTCATCCGCAGCTCCACAGAAGTGATGCGCAGGGTCCACAGGGCCCCCAGCTGCAAGTTTGTA
CAGAATCCTGGCATAAGCTGCTGTGAGAGCCTAGAACTGGAAAATACAGTGTGCCAGTTCACTACAGGCA
AACAATTCCCCAGGTGCCAATACCATAGTGTTACCTCATTAGAGAAGATATTGACAGTGCTGACAGGTCA
TTCTCTGATGAGCTGGTTAGTTTGTGGCTCTAAGTTGTAA

Translation (199 aa):
METFPLLLLSLGLVLAEASESTMKIIKEEFTDEEMQYDMAKSGQEKQTIEILMNPILLVKNTSLSMSKDD
MSSTLLTFRSLHYNDPKGNSSGNDKECCNDMTVWRKVSEANGSCKWSNNFIRSSTEVMRRVHRAPSCKFV
QNPGISCCESLELENTVCQFTTGKQFPRCQYHSVTSLEKILTVLTGHSLMSWLVCGSKL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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