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Report for CCDS9613.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9613.1 Public Homo sapiens 14 EMC9 24 110 108 CCDS HistoryNCBI Gene:51016Re-query CCDS DB by CCDS ID:9613.1Re-query CCDS DB by GeneID:51016See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9613.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216799.9 ENSP00000216799.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216799.9Link to Ensembl Protein Viewer:ENSP00000216799.4Re-query CCDS DB by Nucleotide ID:ENST00000216799Re-query CCDS DB by Protein ID:ENSP00000216799
Original member Current member EBI ENST00000419198.6 ENSP00000403210.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000419198.6Link to Ensembl Protein Viewer:ENSP00000403210.2Re-query CCDS DB by Nucleotide ID:ENST00000419198Re-query CCDS DB by Protein ID:ENSP00000403210
Original member Current member NCBI NM_016049.4 NP_057133.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016049.4Link to Protein Sequence:NP_057133.2Re-query CCDS DB by Nucleotide ID:NM_016049Re-query CCDS DB by Protein ID:NP_057133Link to BLAST:NP_057133.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057133.2 208 Q9Y3B6 208 100% 0 0

Chromosomal Locations for CCDS 9613.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24139010 24139196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24139360 24139454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24139545 24139614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24140889 24140965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24141107 24141304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGGGGGAGGTGGAGATCTCGGCCCTGGCCTACGTGAAGATGTGCCTGCATGCTGCCCGGTACCCACACG
CCGCAGTCAACGGGCTGTTTTTGGCGCCAGCGCCGCGGTCTGGAGAATGCCTGTGCCTCACCGACTGTGT
GCCCCTCTTCCACAGCCACCTGGCCCTGTCCGTCATGTTGGAGGTCGCCCTCAACCAGGTGGATGTGTGG
GGAGCACAGGCCGGTCTGGTGGTGGCTGGTTACTACCATGCCAATGCAGCTGTGAACGATCAGAGCCCTG
GGCCCCTGGCCTTGAAAATTGCTGGGCGAATTGCAGAATTCTTCCCTGATGCAGTACTTATTATGTTGGA
TAATCAGAAACTGGTGCCTCAGCCTCGTGTGCCCCCGGTCATCGTCCTGGAGAACCAAGGTCTCCGCTGG
GTCCCTAAGGATAAGAACTTAGTGATGTGGAGGGACTGGGAAGAGTCACGGCAGATGGTGGGAGCTCTAC
TGGAAGATCGGGCCCACCAGCACCTTGTGGACTTTGACTGCCACCTTGATGACATCCGGCAGGACTGGAC
CAACCAGCGGCTCAACACTCAAATCACCCAGTGGGTTGGTCCCACTAATGGAAATGGAAATGCCTGA

Translation (208 aa):
MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVW
GAQAGLVVAGYYHANAAVNDQSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQPRVPPVIVLENQGLRW
VPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDCHLDDIRQDWTNQRLNTQITQWVGPTNGNGNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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