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Report for CCDS9751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9751.1 Public Homo sapiens 14 SLC38A6 24 110 108 CCDS HistoryNCBI Gene:145389Re-query CCDS DB by CCDS ID:9751.1Re-query CCDS DB by GeneID:145389See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9751.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267488.9 ENSP00000267488.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267488.9Link to Ensembl Protein Viewer:ENSP00000267488.4Re-query CCDS DB by Nucleotide ID:ENST00000267488Re-query CCDS DB by Protein ID:ENSP00000267488
Original member Current member NCBI NM_153811.3 NP_722518.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153811.3Link to Protein Sequence:NP_722518.2Re-query CCDS DB by Nucleotide ID:NM_153811Re-query CCDS DB by Protein ID:NP_722518Link to BLAST:NP_722518.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722518.2 456 Q8IZM9-1 456 100% 0 0

Chromosomal Locations for CCDS 9751.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 60981278 60981382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60982508 60982638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 60984730 60984803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61015904 61015956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61019541 61019580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61030445 61030523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61037059 61037141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61037625 61037683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61043147 61043212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61043450 61043503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61045346 61045425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61046067 61046167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61050512 61050636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61051787 61051931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61052041 61052135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61052349 61052429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1371 nt):
ATGGAGGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCTGGTATGTCTCTGTCCAGCAGCCTGAAGAAG
CGGAGGCCGAAGAGTTGAGTCCGTTGCTAAGCAACGAACTTCACAGACAGCGATCCCCAGGTGTTTCATT
TGGTTTATCAGTGTTTAATTTGATGAATGCCATCATGGGAAGTGGCATCCTTGGCTTAGCTTATGTTTTG
GCTAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGCTTCTTACTCAGTCC
ATCTTCTGCTTAGTATGTGTATTCAGACAGCTGTAACATCTTATGAAGATCTTGGACTCTTTGCATTTGG
ATTACCTGGAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGAATATTGGAGCTATGTCATCTTATCTT
TTAATTATTAAAACAGAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGAGACTATAGTAGATATTGGT
ATCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAA
AATAGGCTTTCTTGGCTACACAAGTAGTTTATCATTTTTCTTTATGATGTTCTTTGCTCTTGTGGTAATA
ATTAAAAAATGGTCCATCCCTTGTCCTCTGACATTAAATTATGTAGAGAAAGGTTTCCAGATTTCAAATG
TTACAGATGATTGTAAGCCAAAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATGCCTTACCAACCATGGC
TTTTTCATTTCTCTGCCATACCTCAATATTGCCCATATACTGTGAACTTCAAAGTCCTTCAAAGAAAAGA
ATGCAGAATGTTACCAATACAGCAATTGCTTTAAGTTTTCTCATTTATTTTATATCTGCACTCTTTGGGT
ACCTCACTTTTTATGACAAAGTGGAGTCAGAATTACTAAAAGGTTATAGTAAATACTTATCACATGATGT
TGTTGTCATGACTGTGAAGTTATGCATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCT
GCCAGAAAAGCTGTAACAATGATGTTTTTCTCCAATTTTCCATTCTCATGGATTCGCCATTTTTTGATCA
CTCTAGCACTCAATATTATCATCGTTTTACTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGT
AGTTGGTGCCAGTACATCAACATGTTTGATTTTTATATTCCCAGGACTATTTTATCTTAAACTTAGCAGA
GAGGATTTTCTGTCATGGAAAAAGCTTGGGGCATTCGTTTTGCTCATCTTTGGAATTTTGGTTGGGAATT
TTAGTTTAGCACTCATCATTTTTGATTGGATTAATAAATAA

Translation (456 aa):
MEASWGSFNAERGWYVSVQQPEEAEAEELSPLLSNELHRQRSPGVSFGLSVFNLMNAIMGSGILGLAYVL
ANTGVFGFSFLLLTVALLASYSVHLLLSMCIQTAVTSYEDLGLFAFGLPGKLVVAGTIIIQNIGAMSSYL
LIIKTELPAAIAEFLTGDYSRYWYLDGQTLLIIICVGIVFPLALLPKIGFLGYTSSLSFFFMMFFALVVI
IKKWSIPCPLTLNYVEKGFQISNVTDDCKPKLFHFSKESAYALPTMAFSFLCHTSILPIYCELQSPSKKR
MQNVTNTAIALSFLIYFISALFGYLTFYDKVESELLKGYSKYLSHDVVVMTVKLCILFAVLLTVPLIHFP
ARKAVTMMFFSNFPFSWIRHFLITLALNIIIVLLAIYVPDIRNVFGVVGASTSTCLIFIFPGLFYLKLSR
EDFLSWKKLGAFVLLIFGILVGNFSLALIIFDWINK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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