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Report for CCDS9768.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9768.1 Public Homo sapiens 14 RAB15 24 110 108 CCDS HistoryNCBI Gene:376267Re-query CCDS DB by CCDS ID:9768.1Re-query CCDS DB by GeneID:376267See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9768.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267512.9 ENSP00000267512.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000267512.9Link to Ensembl Protein Viewer:ENSP00000267512.5Re-query CCDS DB by Nucleotide ID:ENST00000267512Re-query CCDS DB by Protein ID:ENSP00000267512
Original member Current member NCBI NM_198686.3 NP_941959.1 Accepted alive Link to Nucleotide Sequence:NM_198686.3Link to Protein Sequence:NP_941959.1Re-query CCDS DB by Nucleotide ID:NM_198686Re-query CCDS DB by Protein ID:NP_941959Link to BLAST:NP_941959.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941959.1 208 P59190-2 208 100% 0 0

Chromosomal Locations for CCDS 9768.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 64948497 64948512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64948668 64948733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64950325 64950414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64950943 64951151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64951603 64951663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64952511 64952571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64971953 64972076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGGCGAAGCAGTACGATGTGCTGTTCCGGCTGCTGCTGATCGGGGACTCCGGGGTGGGCAAGACCTGCC
TGCTGTGCCGCTTCACCGACAACGAGTTCCACTCCTCGCACATCTCCACCATCGGTGTTGACTTTAAGAT
GAAGACCATAGAGGTAGACGGCATCAAAGTGCGGATACAGATCTGGGACACTGCAGGGCAGGAGAGATAC
CAGACCATCACAAAGCAGTACTATCGGCGGGCCCAGGGGATATTTTTGGTCTATGACATTAGCAGCGAGC
GCTCTTACCAGCACATCATGAAGTGGGTCAGTGACGTGGATGAGGTAGGAGATGCCACCTCACTGCCGGG
GTGTGGAGAGGGTGCCTCACCGGGGAAGGCAAGGCGAGGGCCAGATGGGAAGGCAAATGCTTCCAGGAAG
CTTTGCCTTCCACAGCCCTGGATGAAGACCTCTGGTACGCACCAGAAGGCGTCCAGAAGATCCTTATTGG
GAATAAGGCTGATGAGGAGCAGAAACGGCAGGTGGGAAGAGAGCAAGGGCAGCAGCTGGCGAAGGAGTAT
GGCATGGACTTCTATGAAACAAGTGCCTGCACCAACCTCAACATTAAAGAGTCATTCACGCGTCTGA

Translation (208 aa):
MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERY
QTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDATSLPGCGEGASPGKARRGPDGKANASRK
LCLPQPWMKTSGTHQKASRRSLLGIRLMRSRNGRWEESKGSSWRRSMAWTSMKQVPAPTSTLKSHSRV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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