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Retrieve protein structures that are bound to a specific compound (e.g., aspirin): |
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Method 1: |
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Retrieve a chemical record of interest from the PubChem Compound database, then follow the Other Links:Protein Structures option to see 3D protein structures bound to the chemical of interest |
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example: start with the PubChem Compound record for aspirin (CID 2244) |
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Method 2: |
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Use the PubChem Structure Search tool to compare a query compound to the database and retrieve identical compounds, then open the PubChem record of interest and follow the Other Links:Protein Structures option |
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example: use PubChem Structure Search to retrieve aspirin and identical compounds |
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Retrieve protein structures bound to the query compound or to similar compounds (e.g., aspirin or chemicals like it): |
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Method 3: |
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Retrieve a chemical record of interest from the PubChem Compound database, view its Related Structures/Similar Compounds, then follow the Other Links:Protein Structures option for the set of retrieved records (see note) |
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example: start with the PubChem Compound record for aspirin, then retrieve similar compounds |
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Method 4: |
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Use the PubChem Structure Search tool to compare a query compound to the database and retrieve similar compounds, then view the Other Links:Protein Structures option for the complete set of retrieved records |
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example: use PubChem Structure Search to retrieve aspirin and similar compounds |
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