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Conserved domains on  [gi|47937436|gb|AAH71268|]
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Ferredoxin reductase [Mus musculus]

Protein Classification

ferredoxin--NADP reductase domain-containing protein( domain architecture ID 1000996)

ferredoxin--NADP reductase domain-containing protein may serve as an electron transfer protein and supply electrons to P450 systems

EC:  1.18.1.-
Gene Ontology:  GO:0004324|GO:0050661|GO:0071949
PubMed:  10998235
SCOP:  4000129

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02852 super family cl30539
ferredoxin-NADP+ reductase
10-490 0e+00

ferredoxin-NADP+ reductase


The actual alignment was detected with superfamily member PLN02852:

Pssm-ID: 357415  Cd Length: 491  Bit Score: 527.34  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   10 RWSAWSGLRPSPSRSTptpgfcqkFSTQEKTP-QICVVGSGPAGFYTAQHLLKHHTHAHVDIYEKQLVPFGLVRFGVAPD 88
Cdd:PLN02852   3 RLRARTWLSRALSFSN--------SSSSTSEPlHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPD 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   89 HPEVKNVINTFTQTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYNGLP 168
Cdd:PLN02852  75 HPETKNVTNQFSRVATDDRVSFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHP 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  169 ESQELAPDL-SCDTAVILGQGNVALDVARILLTPPEHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREM 247
Cdd:PLN02852 155 DCVHLPPDLkSSDTAVVLGQGNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELREL 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  248 IQLPGTRPILDPSDFL--GLQDRIKDVPRPRRRLTELLLRTATEKPGVEEAARQALAsrawgLRFFRSPQQVLPTPDG-Q 324
Cdd:PLN02852 235 LGLKNVRVRIKEADLTlsPEDEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnG 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  325 RVAGIRLAVTSLEGVGESTR--AVPTGDVEDLPCGLLLSSVGYKSRPIDpSVPFDPKLGIIPNTEGRVVN-------VPG 395
Cdd:PLN02852 310 HVAGVKLERTVLEGAAGSGKqvAVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLSsasgadtEPG 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  396 LYCSGWVKRGPTGVITTTMTDSFLTSQALLEDLKAGLLP---SGPRPGYVAIQALLSNRGVRPVSFSDWEKLDAEEVSRG 472
Cdd:PLN02852 389 LYVVGWLKRGPTGIIGTNLTCAEETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAG 468
                        490
                 ....*....|....*...
gi 47937436  473 QGTGKPREKLVDRREMLR 490
Cdd:PLN02852 469 RARGKPREKITSIEEMLK 486
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
10-490 0e+00

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 527.34  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   10 RWSAWSGLRPSPSRSTptpgfcqkFSTQEKTP-QICVVGSGPAGFYTAQHLLKHHTHAHVDIYEKQLVPFGLVRFGVAPD 88
Cdd:PLN02852   3 RLRARTWLSRALSFSN--------SSSSTSEPlHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPD 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   89 HPEVKNVINTFTQTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYNGLP 168
Cdd:PLN02852  75 HPETKNVTNQFSRVATDDRVSFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHP 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  169 ESQELAPDL-SCDTAVILGQGNVALDVARILLTPPEHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREM 247
Cdd:PLN02852 155 DCVHLPPDLkSSDTAVVLGQGNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELREL 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  248 IQLPGTRPILDPSDFL--GLQDRIKDVPRPRRRLTELLLRTATEKPGVEEAARQALAsrawgLRFFRSPQQVLPTPDG-Q 324
Cdd:PLN02852 235 LGLKNVRVRIKEADLTlsPEDEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnG 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  325 RVAGIRLAVTSLEGVGESTR--AVPTGDVEDLPCGLLLSSVGYKSRPIDpSVPFDPKLGIIPNTEGRVVN-------VPG 395
Cdd:PLN02852 310 HVAGVKLERTVLEGAAGSGKqvAVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLSsasgadtEPG 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  396 LYCSGWVKRGPTGVITTTMTDSFLTSQALLEDLKAGLLP---SGPRPGYVAIQALLSNRGVRPVSFSDWEKLDAEEVSRG 472
Cdd:PLN02852 389 LYVVGWLKRGPTGIIGTNLTCAEETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAG 468
                        490
                 ....*....|....*...
gi 47937436  473 QGTGKPREKLVDRREMLR 490
Cdd:PLN02852 469 RARGKPREKITSIEEMLK 486
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
29-411 5.30e-42

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 154.91  E-value: 5.30e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  29 GFCQKFSTQEKTPQ-ICVVGSGPAGFYTAQHLLKH-HThahVDIYEKQLVPFGLVRFGVaPDHPEVKNVINtftqtARSD 106
Cdd:COG0493 109 GWVKPPPPAPRTGKkVAVVGSGPAGLAAAYQLARAgHE---VTVFEALDKPGGLLRYGI-PEFRLPKDVLD-----REIE 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436 107 RCA-----FRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYNGlpESQELAPDLSCDT 181
Cdd:COG0493 180 LIEalgveFRTNVEVGKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNL--GEAPDTILAVGKR 257
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436 182 AVILGQGNVALDVARIlltppehlektditeaalgALRQSrVKTVWIVGRRGPLQVAFTIKELREmiqlpgtrpildpsd 261
Cdd:COG0493 258 VVVIGGGNTAMDCART-------------------ALRLG-AESVTIVYRRTREEMPASKEEVEE--------------- 302
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436 262 flglqdrikdvprprrrltelllrtatekpGVEEAARqalasrawgLRFFRSPQQVLPTPDGqRVAGIRLAVTSLEGVGE 341
Cdd:COG0493 303 ------------------------------ALEEGVE---------FLFLVAPVEIIGDENG-RVTGLECVRMELGEPDE 342
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47937436 342 STRAVP---TGDVEDLPCGLLLSSVGYKSRPI----DPSVPFDPKLGIIPNTEGRVVNVPGLYCSGWVKRGPTGVIT 411
Cdd:COG0493 343 SGRRRPvpiEGSEFTLPADLVILAIGQTPDPSgleeELGLELDKRGTIVVDEETYQTSLPGVFAGGDAVRGPSLVVW 419
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
10-490 0e+00

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 527.34  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   10 RWSAWSGLRPSPSRSTptpgfcqkFSTQEKTP-QICVVGSGPAGFYTAQHLLKHHTHAHVDIYEKQLVPFGLVRFGVAPD 88
Cdd:PLN02852   3 RLRARTWLSRALSFSN--------SSSSTSEPlHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPD 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   89 HPEVKNVINTFTQTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYNGLP 168
Cdd:PLN02852  75 HPETKNVTNQFSRVATDDRVSFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHP 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  169 ESQELAPDL-SCDTAVILGQGNVALDVARILLTPPEHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREM 247
Cdd:PLN02852 155 DCVHLPPDLkSSDTAVVLGQGNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELREL 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  248 IQLPGTRPILDPSDFL--GLQDRIKDVPRPRRRLTELLLRTATEKPGVEEAARQALAsrawgLRFFRSPQQVLPTPDG-Q 324
Cdd:PLN02852 235 LGLKNVRVRIKEADLTlsPEDEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnG 309
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  325 RVAGIRLAVTSLEGVGESTR--AVPTGDVEDLPCGLLLSSVGYKSRPIDpSVPFDPKLGIIPNTEGRVVN-------VPG 395
Cdd:PLN02852 310 HVAGVKLERTVLEGAAGSGKqvAVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLSsasgadtEPG 388
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  396 LYCSGWVKRGPTGVITTTMTDSFLTSQALLEDLKAGLLP---SGPRPGYVAIQALLSNRGVRPVSFSDWEKLDAEEVSRG 472
Cdd:PLN02852 389 LYVVGWLKRGPTGIIGTNLTCAEETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAG 468
                        490
                 ....*....|....*...
gi 47937436  473 QGTGKPREKLVDRREMLR 490
Cdd:PLN02852 469 RARGKPREKITSIEEMLK 486
PTZ00188 PTZ00188
adrenodoxin reductase; Provisional
30-262 5.40e-50

adrenodoxin reductase; Provisional


Pssm-ID: 240308  Cd Length: 506  Bit Score: 178.54  E-value: 5.40e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   30 FCQK--FSTQEKTPQICVVGSGPAGFYTAQHLLKHHtHAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDR 107
Cdd:PTZ00188  27 FTGKcfFTNEAKPFKVGIIGAGPSALYCCKHLLKHE-RVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPN 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  108 CAFRGNVVVGRDVSVPELREAYHAVVLSYGA---------EDHQPLGIPGEEL----SGVVSARAFVGWYNGLPEsqela 174
Cdd:PTZ00188 106 YRFFGNVHVGVDLKMEELRNHYNCVIFCCGAsevsipigqQDEDKAVSGGETNprkqNGIFHARDLIYFYNNMYN----- 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  175 pDLSC-------------DTAVILGQGNVALDVARILLTPPEHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTI 241
Cdd:PTZ00188 181 -DVRCkavdnylnsfenfTTSIIIGNGNVSLDIARILIKSPDDLSKTDISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTN 259
                        250       260
                 ....*....|....*....|.
gi 47937436  242 KELREMIQLPGTRPILDPSDF 262
Cdd:PTZ00188 260 AELRELISLENTKVILSKKNY 280
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
29-411 5.30e-42

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 154.91  E-value: 5.30e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  29 GFCQKFSTQEKTPQ-ICVVGSGPAGFYTAQHLLKH-HThahVDIYEKQLVPFGLVRFGVaPDHPEVKNVINtftqtARSD 106
Cdd:COG0493 109 GWVKPPPPAPRTGKkVAVVGSGPAGLAAAYQLARAgHE---VTVFEALDKPGGLLRYGI-PEFRLPKDVLD-----REIE 179
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436 107 RCA-----FRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYNGlpESQELAPDLSCDT 181
Cdd:COG0493 180 LIEalgveFRTNVEVGKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNL--GEAPDTILAVGKR 257
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436 182 AVILGQGNVALDVARIlltppehlektditeaalgALRQSrVKTVWIVGRRGPLQVAFTIKELREmiqlpgtrpildpsd 261
Cdd:COG0493 258 VVVIGGGNTAMDCART-------------------ALRLG-AESVTIVYRRTREEMPASKEEVEE--------------- 302
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436 262 flglqdrikdvprprrrltelllrtatekpGVEEAARqalasrawgLRFFRSPQQVLPTPDGqRVAGIRLAVTSLEGVGE 341
Cdd:COG0493 303 ------------------------------ALEEGVE---------FLFLVAPVEIIGDENG-RVTGLECVRMELGEPDE 342
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47937436 342 STRAVP---TGDVEDLPCGLLLSSVGYKSRPI----DPSVPFDPKLGIIPNTEGRVVNVPGLYCSGWVKRGPTGVIT 411
Cdd:COG0493 343 SGRRRPvpiEGSEFTLPADLVILAIGQTPDPSgleeELGLELDKRGTIVVDEETYQTSLPGVFAGGDAVRGPSLVVW 419
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
32-405 1.80e-24

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 105.65  E-value: 1.80e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   32 QKFSTQEKTPQ-ICVVGSGPAGFyTAQHLLKHHTHAhVDIYEKQLVPFGLVRFGVapdhPE---VKNVINTFTQTARSDR 107
Cdd:PRK11749 131 VLFKRAPKTGKkVAVIGAGPAGL-TAAHRLARKGYD-VTIFEARDKAGGLLRYGI----PEfrlPKDIVDREVERLLKLG 204
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  108 CAFRGNVVVGRDVSVPELREAYHAVVLSYGAedHQP--LGIPGEELSGVVSARAFVgwynglpESQELAPDLSCDTA--- 182
Cdd:PRK11749 205 VEIRTNTEVGRDITLDELRAGYDAVFIGTGA--GLPrfLGIPGENLGGVYSAVDFL-------TRVNQAVADYDLPVgkr 275
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  183 -VILGQGNVALDVARilltppehlektdiTEAALGAlrqsrvKTVWIVGRRGplqvaftiKElrEMiqlPGtrpildpsd 261
Cdd:PRK11749 276 vVVIGGGNTAMDAAR--------------TAKRLGA------ESVTIVYRRG--------RE--EM---PA--------- 313
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  262 flglqdRIKDVprprrrltelllRTATEKpGVEeaarqalasrawgLRFFRSPQQVLptPDGQRVAGIRLAVTSLEGVGE 341
Cdd:PRK11749 314 ------SEEEV------------EHAKEE-GVE-------------FEWLAAPVEIL--GDEGRVTGVEFVRMELGEPDA 359
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47937436  342 S-TRAVP-TGDVEDLPCGLLLSSVGYKSRPIDPSVPfdPKLGIipNTEGRVV--------NVPGLYCSGWVKRG 405
Cdd:PRK11749 360 SgRRRVPiEGSEFTLPADLVIKAIGQTPNPLILSTT--PGLEL--NRWGTIIaddetgrtSLPGVFAGGDIVTG 429
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
43-199 8.76e-17

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 83.24  E-value: 8.76e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   43 ICVVGSGPAGFYTAQHLL-KHHthaHVDIYEKQLVPFGLVRFGVaPDH--PEvkNVINTFTQTARSDRCAFRGNVVVGRD 119
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLrKGH---DVTIFDANEQAGGMMRYGI-PRFrlPE--SVIDADIAPLRAMGAEFRFNTVFGRD 269
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  120 VSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVgwyNGLPESQELAPDLScdtAVILGQGNVALDVARILL 199
Cdd:PRK12814 270 ITLEELQKEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFL---RNVALGTALHPGKK---VVVIGGGNTAIDAARTAL 343
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
43-196 3.91e-16

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 81.07  E-value: 3.91e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   43 ICVVGSGPAGFYTAQHL-LKHHthaHVDIYEKQLVPFGLVRFGVaPDH--P------EVKNVINTFTQTarsdrcafRGN 113
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLrRMGH---AVTIFEAGPKLGGMMRYGI-PAYrlPrevldaEIQRILDLGVEV--------RLG 207
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  114 VVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYNglpesqELAPDLSCDTAVILGQGNVALD 193
Cdd:PRK12771 208 VRVGEDITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVG------EGEPPFLGKRVVVIGGGNTAMD 281

                 ...
gi 47937436  194 VAR 196
Cdd:PRK12771 282 AAR 284
gltD PRK12810
glutamate synthase subunit beta; Reviewed
45-154 4.32e-15

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 77.51  E-value: 4.32e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   45 VVGSGPAGFYTAQHLLKH-HThahVDIYEKQLVPFGLVRFGVaPDHPEVKNVIntftqtarsDR---------CAFRGNV 114
Cdd:PRK12810 148 VVGSGPAGLAAADQLARAgHK---VTVFERADRIGGLLRYGI-PDFKLEKEVI---------DRrielmeaegIEFRTNV 214
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 47937436  115 VVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGV 154
Cdd:PRK12810 215 EVGKDITAEELLAEYDAVFLGTGAYKPRDLGIPGRDLDGV 254
PRK12775 PRK12775
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ...
26-410 5.64e-15

putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional


Pssm-ID: 183738 [Multi-domain]  Cd Length: 1006  Bit Score: 78.06  E-value: 5.64e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436    26 PTPGFCQKFStqEKTPQICVVGSGPAGFYTAQHLLKHHthAHVDIYEKQLVPFGLVRFGVaPDHPEVKNVINTFTQTARS 105
Cdd:PRK12775  418 AKPVKPPRFS--KKLGKVAICGSGPAGLAAAADLVKYG--VDVTVYEALHVVGGVLQYGI-PSFRLPRDIIDREVQRLVD 492
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   106 DRCAFRGNVVVGRDVSVPEL--REAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYN--GLPESQELAPDLSCDT 181
Cdd:PRK12775  493 IGVKIETNKVIGKTFTVPQLmnDKGFDAVFLGVGAGAPTFLGIPGEFAGQVYSANEFLTRVNlmGGDKFPFLDTPISLGK 572
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   182 AVI-LGQGNVALDVARIlltppehlektditEAALGAlrqsrvKTVWIVGRRGPLQVAFTIKELREmiqlpgtrpildps 260
Cdd:PRK12775  573 SVVvIGAGNTAMDCLRV--------------AKRLGA------PTVRCVYRRSEAEAPARIEEIRH-------------- 618
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   261 dflglqdrikdvprprrrltelllrtATEKpGVEeaarqalasrawgLRFFRSPQQVLPTPDGQrVAGIRLAVTSLEGVG 340
Cdd:PRK12775  619 --------------------------AKEE-GID-------------FFFLHSPVEIYVDAEGS-VRGMKVEEMELGEPD 657
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   341 ESTR--AVPTGDVEDLPCGLLLSSVGYKSRPI----DPSVPFDpKLGIIPNTEGRV-----VNVPGLYCSGWVKRGPTGV 409
Cdd:PRK12775  658 EKGRrkPMPTGEFKDLECDTVIYALGTKANPIitqsTPGLALN-KWGNIAADDGKLestqsTNLPGVFAGGDIVTGGATV 736

                  .
gi 47937436   410 I 410
Cdd:PRK12775  737 I 737
PRK12809 PRK12809
putative oxidoreductase Fe-S binding subunit; Reviewed
16-196 2.26e-14

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183762 [Multi-domain]  Cd Length: 639  Bit Score: 75.45  E-value: 2.26e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   16 GLRPSPSRSTPtpgfcqkfstqeKTPQICVVGSGPAGFYTAQHLLKhhTHAHVDIYEKQLVPFGLVRFGVAPDHPEvKNV 95
Cdd:PRK12809 298 GWRPDVSKVVP------------RSEKVAVIGAGPAGLGCADILAR--AGVQVDVFDRHPEIGGMLTFGIPPFKLD-KTV 362
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   96 INTFTQTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYN----GLPESQ 171
Cdd:PRK12809 363 LSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTrqlmGLPESE 442
                        170       180
                 ....*....|....*....|....*.
gi 47937436  172 ELA-PDLSCDTAVILGQGNVALDVAR 196
Cdd:PRK12809 443 EYPlTDVEGKRVVVLGGGDTTMDCLR 468
PRK12831 PRK12831
putative oxidoreductase; Provisional
42-233 2.98e-14

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 74.67  E-value: 2.98e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   42 QICVVGSGPAGFYTAQHLLKhhTHAHVDIYEKQLVPFGLVRFGVA----PDHPEVKNVINTFtqtaRSDRCAFRGNVVVG 117
Cdd:PRK12831 142 KVAVIGSGPAGLTCAGDLAK--MGYDVTIFEALHEPGGVLVYGIPefrlPKETVVKKEIENI----KKLGVKIETNVVVG 215
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  118 RDVSVPELRE--AYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYN----GLPESQElaPDLSCDTAVILGQGNVA 191
Cdd:PRK12831 216 KTVTIDELLEeeGFDAVFIGSGAGLPKFMGIPGENLNGVFSANEFLTRVNlmkaYKPEYDT--PIKVGKKVAVVGGGNVA 293
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 47937436  192 LDVARILLTppehlektditeaaLGAlrqsrvkTVWIVGRRG 233
Cdd:PRK12831 294 MDAARTALR--------------LGA-------EVHIVYRRS 314
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
42-430 7.16e-13

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 70.93  E-value: 7.16e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   42 QICVVGSGPAGFYTAQHLLKHHThaHVDIYEKQLVPFGLVRFGVapdhPEV---KNVINTFTQTARSDRCAFRGNVVVGR 118
Cdd:PRK12778 433 KVAVIGSGPAGLSFAGDLAKRGY--DVTVFEALHEIGGVLKYGI----PEFrlpKKIVDVEIENLKKLGVKFETDVIVGK 506
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  119 DVSVPELR-EAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGWYNGLPESQELA--PDLSCDTAVILGQGNVALDVA 195
Cdd:PRK12778 507 TITIEELEeEGFKGIFIASGAGLPNFMNIPGENSNGVMSSNEYLTRVNLMDAASPDSdtPIKFGKKVAVVGGGNTAMDSA 586
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  196 RilltppehlektdiTEAALGAlrqsrvKTVWIVGRRGPlqvaftikelREMiqlpgtrpildPSdflglqdRIKDVprp 275
Cdd:PRK12778 587 R--------------TAKRLGA------ERVTIVYRRSE----------EEM-----------PA-------RLEEV--- 615
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  276 rrrltelllrtateKPGVEEaarqalasrawGLRF--FRSPQQVLPTPDGqRVAGIRLAVTSLEGVGESTRAVP---TGD 350
Cdd:PRK12778 616 --------------KHAKEE-----------GIEFltLHNPIEYLADEKG-WVKQVVLQKMELGEPDASGRRRPvaiPGS 669
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  351 VEDLPCGLLLSSVGYKSRPIDPSVPFDPKL---GIIPNTEGRVVNVPGLYCSGWVKRGPTGVItTTMTDSFLTSQALLED 427
Cdd:PRK12778 670 TFTVDVDLVIVSVGVSPNPLVPSSIPGLELnrkGTIVVDEEMQSSIPGIYAGGDIVRGGATVI-LAMGDGKRAAAAIDEY 748

                 ...
gi 47937436  428 LKA 430
Cdd:PRK12778 749 LSS 751
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
33-247 7.97e-13

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 69.63  E-value: 7.97e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   33 KFSTQEKTPQ------ICVVGSGPAGFYTAQHLLkhhTHAH-VDIYEKQLVPFGLVRFGVAPDHPEVKNV---------- 95
Cdd:PRK12770   5 KFAFMCKEKPpptgkkVAIIGAGPAGLAAAGYLA---CLGYeVHVYDKLPEPGGLMLFGIPEFRIPIERVregvkeleea 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   96 -INTFTQT---ARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFVGW-----YNG 166
Cdd:PRK12770  82 gVVFHTRTkvcCGEPLHEEEGDEFVERIVSLEELVKKYDAVLIATGTWKSRKLGIPGEDLPGVYSALEYLFRiraakLGY 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  167 LPesQELAPDLSCDTAVILGQGNVALDVArilltppehlektdITEAALGAlrqsrvKTVWIVGRRgPLQVA----FTIK 242
Cdd:PRK12770 162 LP--WEKVPPVEGKKVVVVGAGLTAVDAA--------------LEAVLLGA------EKVYLAYRR-TINEApagkYEIE 218

                 ....*
gi 47937436  243 ELREM 247
Cdd:PRK12770 219 RLIAR 223
PRK13984 PRK13984
putative oxidoreductase; Provisional
33-196 9.78e-12

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 67.10  E-value: 9.78e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   33 KFSTQEKTPQICVVGSGPAGFYTAQHLLKhhTHAHVDIYEKQLVPFGLVRFGVA----PDHPEVKNVinTFTQtarSDRC 108
Cdd:PRK13984 276 DDEPEKKNKKVAIVGSGPAGLSAAYFLAT--MGYEVTVYESLSKPGGVMRYGIPsyrlPDEALDKDI--AFIE---ALGV 348
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  109 AFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSA----RAFVGWYNGLPESQELAPDLscdtaVI 184
Cdd:PRK13984 349 KIHLNTRVGKDIPLEELREKHDAVFLSTGFTLGRSTRIPGTDHPDVIQAlpllREIRDYLRGEGPKPKIPRSL-----VV 423
                        170
                 ....*....|..
gi 47937436  185 LGQGNVALDVAR 196
Cdd:PRK13984 424 IGGGNVAMDIAR 435
PRK12779 PRK12779
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ...
41-410 1.67e-09

putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional


Pssm-ID: 183740 [Multi-domain]  Cd Length: 944  Bit Score: 60.62  E-value: 1.67e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   41 PQICVVGSGPAGFYTAqHLLKHHTHAhVDIYEKQLVPFGLVRFGVapdhPEVK---NVINTFTQTARSDRCAFRGNVVVG 117
Cdd:PRK12779 307 PPIAVVGSGPSGLINA-YLLAVEGFP-VTVFEAFHDLGGVLRYGI----PEFRlpnQLIDDVVEKIKLLGGRFVKNFVVG 380
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  118 RDVSVPEL-REAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAF---VGWYNGLPESQELA-PDLSCDTAVILGQGNVAL 192
Cdd:PRK12779 381 KTATLEDLkAAGFWKIFVGTGAGLPTFMNVPGEHLLGVMSANEFltrVNLMRGLDDDYETPlPEVKGKEVFVIGGGNTAM 460
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  193 DVARilltppehlektdiTEAALGALrqsrvktVWIVGRRGPLQVAFTIKELREMIQlpgtrpildpsdflglqdrikdv 272
Cdd:PRK12779 461 DAAR--------------TAKRLGGN-------VTIVYRRTKSEMPARVEELHHALE----------------------- 496
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436  273 prprrrltelllrtatekPGVEeaarqalasrawgLRFFRSPQQVLPTPDGQRVAGIRLAVTSLEGVGESTR--AVPTGD 350
Cdd:PRK12779 497 ------------------EGIN-------------LAVLRAPREFIGDDHTHFVTHALLDVNELGEPDKSGRrsPKPTGE 545
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47937436  351 VEDLPCGLLLSSVGYKSRPI----DPSVPFDpKLGIIPNTEG-RVVNVPGLYCSGWVKRGPTGVI 410
Cdd:PRK12779 546 IERVPVDLVIMALGNTANPImkdaEPGLKTN-KWGTIEVEKGsQRTSIKGVYSGGDAARGGSTAI 609
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
15-196 4.50e-06

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 49.36  E-value: 4.50e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   15 SGLRPSPSRSTPTpgfcqkfstqekTPQICVVGSGPAGFYTAQHLLKHHTHAHVdiYEKQLVPFGLVRFGVaPDHPEVKN 94
Cdd:PRK12769 314 KGWRPDLSQVTKS------------DKRVAIIGAGPAGLACADVLARNGVAVTV--YDRHPEIGGLLTFGI-PAFKLDKS 378
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47937436   95 VINTFTQTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELSGVVSARAFV----GWYNGLPES 170
Cdd:PRK12769 379 LLARRREIFSAMGIEFELNCEVGKDISLESLLEDYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLiantKQVMGLEEL 458
                        170       180
                 ....*....|....*....|....*..
gi 47937436  171 -QELAPDLSCDTAVILGQGNVALDVAR 196
Cdd:PRK12769 459 pEEPFINTAGLNVVVLGGGDTAMDCVR 485
PRK09897 PRK09897
FAD-NAD(P)-binding protein;
42-73 2.09e-03

FAD-NAD(P)-binding protein;


Pssm-ID: 182134 [Multi-domain]  Cd Length: 534  Bit Score: 40.49  E-value: 2.09e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 47937436   42 QICVVGSGPAGFYTAQHLLKHHTHAHVDIYEK 73
Cdd:PRK09897   3 KIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQ 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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