CCDC25 protein [Homo sapiens]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| NFACT-R_1 super family | cl47219 | NFACT protein RNA binding domain; This domain occurs in proteins that have been annotated as ... |
1-39 | 6.78e-11 | ||
NFACT protein RNA binding domain; This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from Swiss:O34693 where the N-terminal region is involved in this activity. It is an RNA binding domain of the NFACT (NEMF, FbpA, Caliban, and Tae2) proteins. This NFACT-R family is found in two eukaryotic gene contexts: fused to the NFACT-N and NFACT-C domains in the NFACT protein involved in the ribosomal quality control pathway which contributes to CAT-tailing and as a standalone domain. Additionally this domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important. The actual alignment was detected with superfamily member pfam05670: Pssm-ID: 428576 [Multi-domain] Cd Length: 111 Bit Score: 51.85 E-value: 6.78e-11
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| Name | Accession | Description | Interval | E-value | ||
| NFACT-R_1 | pfam05670 | NFACT protein RNA binding domain; This domain occurs in proteins that have been annotated as ... |
1-39 | 6.78e-11 | ||
NFACT protein RNA binding domain; This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from Swiss:O34693 where the N-terminal region is involved in this activity. It is an RNA binding domain of the NFACT (NEMF, FbpA, Caliban, and Tae2) proteins. This NFACT-R family is found in two eukaryotic gene contexts: fused to the NFACT-N and NFACT-C domains in the NFACT protein involved in the ribosomal quality control pathway which contributes to CAT-tailing and as a standalone domain. Additionally this domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important. Pssm-ID: 428576 [Multi-domain] Cd Length: 111 Bit Score: 51.85 E-value: 6.78e-11
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| Name | Accession | Description | Interval | E-value | ||
| NFACT-R_1 | pfam05670 | NFACT protein RNA binding domain; This domain occurs in proteins that have been annotated as ... |
1-39 | 6.78e-11 | ||
NFACT protein RNA binding domain; This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from Swiss:O34693 where the N-terminal region is involved in this activity. It is an RNA binding domain of the NFACT (NEMF, FbpA, Caliban, and Tae2) proteins. This NFACT-R family is found in two eukaryotic gene contexts: fused to the NFACT-N and NFACT-C domains in the NFACT protein involved in the ribosomal quality control pathway which contributes to CAT-tailing and as a standalone domain. Additionally this domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important. Pssm-ID: 428576 [Multi-domain] Cd Length: 111 Bit Score: 51.85 E-value: 6.78e-11
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