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Conserved domains on  [gi|12667391|gb|AAK01421|]
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hepatocyte growth factor activator inhibitor type 2-related small peptide [Homo sapiens]

Protein Classification

IMUP domain-containing protein( domain architecture ID 11239066)

IMUP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
IMUP pfam15761
immortalization up-regulated protein; This family of proteins is found in eukaryotes. Proteins ...
 1-79 1.43e-13

immortalization up-regulated protein; This family of proteins is found in eukaryotes. Proteins in this family are approximately 100 amino acids in length. There are two conserved sequence motifs: GDPK and KKPK.


:

Pssm-ID: 464852  Cd Length: 101  Bit Score: 61.13  E-value: 1.43e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12667391     1 MEFDLGAALEPTSQKPGvGAGHGGDPKLSPHKVQGRSEAGAGPGPKQGHHSSSDSSSSSSDSD-----TDVKSHAAGSKQ 75
Cdd:pfam15761   1 MEFDLAAALEPTSKKPE-GAGQVGDPKHSPPKVQGRSEAGAAHKPRHGHGHGSSSDSSSSSSSssdsdNEAKPHAAGSQQ 79


                  ....
gi 12667391    76 HESI 79
Cdd:pfam15761  80 HEST 83
 
Name Accession Description Interval E-value
IMUP pfam15761
immortalization up-regulated protein; This family of proteins is found in eukaryotes. Proteins ...
 1-79 1.43e-13

immortalization up-regulated protein; This family of proteins is found in eukaryotes. Proteins in this family are approximately 100 amino acids in length. There are two conserved sequence motifs: GDPK and KKPK.


Pssm-ID: 464852  Cd Length: 101  Bit Score: 61.13  E-value: 1.43e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12667391     1 MEFDLGAALEPTSQKPGvGAGHGGDPKLSPHKVQGRSEAGAGPGPKQGHHSSSDSSSSSSDSD-----TDVKSHAAGSKQ 75
Cdd:pfam15761   1 MEFDLAAALEPTSKKPE-GAGQVGDPKHSPPKVQGRSEAGAAHKPRHGHGHGSSSDSSSSSSSssdsdNEAKPHAAGSQQ 79


                  ....
gi 12667391    76 HESI 79
Cdd:pfam15761  80 HEST 83
 
Name Accession Description Interval E-value
IMUP pfam15761
immortalization up-regulated protein; This family of proteins is found in eukaryotes. Proteins ...
 1-79 1.43e-13

immortalization up-regulated protein; This family of proteins is found in eukaryotes. Proteins in this family are approximately 100 amino acids in length. There are two conserved sequence motifs: GDPK and KKPK.


Pssm-ID: 464852  Cd Length: 101  Bit Score: 61.13  E-value: 1.43e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12667391     1 MEFDLGAALEPTSQKPGvGAGHGGDPKLSPHKVQGRSEAGAGPGPKQGHHSSSDSSSSSSDSD-----TDVKSHAAGSKQ 75
Cdd:pfam15761   1 MEFDLAAALEPTSKKPE-GAGQVGDPKHSPPKVQGRSEAGAAHKPRHGHGHGSSSDSSSSSSSssdsdNEAKPHAAGSQQ 79


                  ....
gi 12667391    76 HESI 79
Cdd:pfam15761  80 HEST 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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