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Conserved domains on  [gi|19550365|gb|AAL91353|]
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gm117 form B, partial [Homo sapiens]

Protein Classification

DUF4660 domain-containing protein( domain architecture ID 10634692)

DUF4660 domain-containing protein similar to Homo sapiens UPF0690 protein C1orf52 (also called BCL10-associated gene protein)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4660 pfam15559
Domain of unknown function (DUF4660); This family of proteins is found in eukaryotes. Proteins ...
 30-92 3.53e-21

Domain of unknown function (DUF4660); This family of proteins is found in eukaryotes. Proteins in this family are typically between 93 and 189 amino acids in length.


:

Pssm-ID: 464769  Cd Length: 107  Bit Score: 80.20  E-value: 3.53e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19550365    30 EPEETSRRTPDPAKSAGGCRNKAEKrLPGPDELFRSVTRPAFLYNPLNKQIDWERHVVKAPEE 92
Cdd:pfam15559   9 QPEQSTETTKKEAESSANSTAKGIK-LPDPDELFRSVSRPSFLYNPLNKQIDWESRTVKAPEE 70
 
Name Accession Description Interval E-value
DUF4660 pfam15559
Domain of unknown function (DUF4660); This family of proteins is found in eukaryotes. Proteins ...
 30-92 3.53e-21

Domain of unknown function (DUF4660); This family of proteins is found in eukaryotes. Proteins in this family are typically between 93 and 189 amino acids in length.


Pssm-ID: 464769  Cd Length: 107  Bit Score: 80.20  E-value: 3.53e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19550365    30 EPEETSRRTPDPAKSAGGCRNKAEKrLPGPDELFRSVTRPAFLYNPLNKQIDWERHVVKAPEE 92
Cdd:pfam15559   9 QPEQSTETTKKEAESSANSTAKGIK-LPDPDELFRSVSRPSFLYNPLNKQIDWESRTVKAPEE 70
 
Name Accession Description Interval E-value
DUF4660 pfam15559
Domain of unknown function (DUF4660); This family of proteins is found in eukaryotes. Proteins ...
 30-92 3.53e-21

Domain of unknown function (DUF4660); This family of proteins is found in eukaryotes. Proteins in this family are typically between 93 and 189 amino acids in length.


Pssm-ID: 464769  Cd Length: 107  Bit Score: 80.20  E-value: 3.53e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19550365    30 EPEETSRRTPDPAKSAGGCRNKAEKrLPGPDELFRSVTRPAFLYNPLNKQIDWERHVVKAPEE 92
Cdd:pfam15559   9 QPEQSTETTKKEAESSANSTAKGIK-LPDPDELFRSVSRPSFLYNPLNKQIDWESRTVKAPEE 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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