NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|119569761|gb|EAW49376|]
View 

chromosome 10 open reading frame 119, isoform CRA_b [Homo sapiens]

Protein Classification

mini-chromosome maintenance complex-binding protein( domain architecture ID 10560849)

mini-chromosome maintenance (MCM) complex-binding protein is an associated component of the MCM complex that acts as a regulator of DNA replication; it binds to the MCM complex and promotes its disassembly from chromatin, thereby acting as a key regulator of the pre-replication complex (pre-RC) unloading from replicated DNA

Gene Ontology:  GO:0003682|GO:0006261
PubMed:  21196493

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
1-453 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


:

Pssm-ID: 462870  Cd Length: 572  Bit Score: 679.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761    1 MDLQPNKQKDQHAGARqagsvgglqWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVN 80
Cdd:pfam09739 141 MDVDVSEDKTEISSSE---------GACESKRSETDTPSSASASSSVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLN 211
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761   81 DILELYGILSVDPVLSILNNDERDasalldpmeCTDTAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPACLNKeeskT 160
Cdd:pfam09739 212 DVLEFVGVLSVDPALSAISDDSDD---------LMDTLEEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLNNSPNS----N 278
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  161 FVSSFMSELSPVRAELLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPR--NSTFTEHLYRIIQHL 238
Cdd:pfam09739 279 FEPSFPELAAAIREELLDHLTHLLGGDELAAEYLLLHLISRVYSRRDVLALGKFSLNLSGLPKesLSVFTKQLYQAIQQL 358
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  239 VPASFRLQMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDYDFS 318
Cdd:pfam09739 359 VPKSHYLPMTLENLNTLRFIPKKDYTTNRLVSGVLQLAPGTHLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFE 438
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  319 YHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNM-EEYMNSLLSAVlPSVLNKFRIYLTLLRFLEYSISDEITKA 397
Cdd:pfam09739 439 YYQMEFPTDIPVLVLSEGKSMLPSDCQVPLQPDSSPSELvEEYLEAAHHYT-PELLNKFRIYLTTARLLDYSISEEMTKA 517
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 119569761  398 VEDDFVEMRKNDPQsITADDLHQLLVVARCLSLSAGQTTLSRERWLRAKQLESLRR 453
Cdd:pfam09739 518 IEDDFVAMRQADRK-VSADDLHRLLVLARLLSLSYGETTLSLEHWQRAKELERLRK 572
 
Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
1-453 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


Pssm-ID: 462870  Cd Length: 572  Bit Score: 679.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761    1 MDLQPNKQKDQHAGARqagsvgglqWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVN 80
Cdd:pfam09739 141 MDVDVSEDKTEISSSE---------GACESKRSETDTPSSASASSSVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLN 211
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761   81 DILELYGILSVDPVLSILNNDERDasalldpmeCTDTAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPACLNKeeskT 160
Cdd:pfam09739 212 DVLEFVGVLSVDPALSAISDDSDD---------LMDTLEEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLNNSPNS----N 278
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  161 FVSSFMSELSPVRAELLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPR--NSTFTEHLYRIIQHL 238
Cdd:pfam09739 279 FEPSFPELAAAIREELLDHLTHLLGGDELAAEYLLLHLISRVYSRRDVLALGKFSLNLSGLPKesLSVFTKQLYQAIQQL 358
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  239 VPASFRLQMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDYDFS 318
Cdd:pfam09739 359 VPKSHYLPMTLENLNTLRFIPKKDYTTNRLVSGVLQLAPGTHLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFE 438
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  319 YHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNM-EEYMNSLLSAVlPSVLNKFRIYLTLLRFLEYSISDEITKA 397
Cdd:pfam09739 439 YYQMEFPTDIPVLVLSEGKSMLPSDCQVPLQPDSSPSELvEEYLEAAHHYT-PELLNKFRIYLTTARLLDYSISEEMTKA 517
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 119569761  398 VEDDFVEMRKNDPQsITADDLHQLLVVARCLSLSAGQTTLSRERWLRAKQLESLRR 453
Cdd:pfam09739 518 IEDDFVAMRQADRK-VSADDLHRLLVLARLLSLSYGETTLSLEHWQRAKELERLRK 572
 
Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
1-453 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


Pssm-ID: 462870  Cd Length: 572  Bit Score: 679.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761    1 MDLQPNKQKDQHAGARqagsvgglqWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVN 80
Cdd:pfam09739 141 MDVDVSEDKTEISSSE---------GACESKRSETDTPSSASASSSVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLN 211
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761   81 DILELYGILSVDPVLSILNNDERDasalldpmeCTDTAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPACLNKeeskT 160
Cdd:pfam09739 212 DVLEFVGVLSVDPALSAISDDSDD---------LMDTLEEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLNNSPNS----N 278
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  161 FVSSFMSELSPVRAELLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPR--NSTFTEHLYRIIQHL 238
Cdd:pfam09739 279 FEPSFPELAAAIREELLDHLTHLLGGDELAAEYLLLHLISRVYSRRDVLALGKFSLNLSGLPKesLSVFTKQLYQAIQQL 358
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  239 VPASFRLQMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDYDFS 318
Cdd:pfam09739 359 VPKSHYLPMTLENLNTLRFIPKKDYTTNRLVSGVLQLAPGTHLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFE 438
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119569761  319 YHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNM-EEYMNSLLSAVlPSVLNKFRIYLTLLRFLEYSISDEITKA 397
Cdd:pfam09739 439 YYQMEFPTDIPVLVLSEGKSMLPSDCQVPLQPDSSPSELvEEYLEAAHHYT-PELLNKFRIYLTTARLLDYSISEEMTKA 517
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 119569761  398 VEDDFVEMRKNDPQsITADDLHQLLVVARCLSLSAGQTTLSRERWLRAKQLESLRR 453
Cdd:pfam09739 518 IEDDFVAMRQADRK-VSADDLHRLLVLARLLSLSYGETTLSLEHWQRAKELERLRK 572
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH