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Conserved domains on  [gi|1191692480|sp|J3QPP8|]
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RecName: Full=ALK and LTK ligand 1; AltName: Full=Augmentor beta; Short=AUG-beta; Flags: Precursor

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM150 super family cl20997
FAM150 family; This family of proteins known as FAM150 is found in eukaryotes. Members of this ...
 58-126 2.75e-47

FAM150 family; This family of proteins known as FAM150 is found in eukaryotes. Members of this family are as yet uncharacterized. Proteins in this family are approximately 143 amino acids in length. The function of this family has not, as yet, been determined, however it is predicted to be a secretory protein family.


The actual alignment was detected with superfamily member pfam15129:

Pssm-ID: 464519  Cd Length: 124  Bit Score: 148.36  E-value: 2.75e-47
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1191692480  58 SRSTEIFPRDLTLKDKFIKHFTGPVTFSAECSKHFHRLYHNTRDCSTPAYYKRCARLLTRLAVSPLCSQ 126
Cdd:pfam15129  55 QRVIEIVPRDLRMKDKFIKHLTGPLYFSPKCRKHFHRLYHNTRDCTIPAYYKRCARLLTRLAMSPLCME 123
 
Name Accession Description Interval E-value
FAM150 pfam15129
FAM150 family; This family of proteins known as FAM150 is found in eukaryotes. Members of this ...
 58-126 2.75e-47

FAM150 family; This family of proteins known as FAM150 is found in eukaryotes. Members of this family are as yet uncharacterized. Proteins in this family are approximately 143 amino acids in length. The function of this family has not, as yet, been determined, however it is predicted to be a secretory protein family.


Pssm-ID: 464519  Cd Length: 124  Bit Score: 148.36  E-value: 2.75e-47
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1191692480  58 SRSTEIFPRDLTLKDKFIKHFTGPVTFSAECSKHFHRLYHNTRDCSTPAYYKRCARLLTRLAVSPLCSQ 126
Cdd:pfam15129  55 QRVIEIVPRDLRMKDKFIKHLTGPLYFSPKCRKHFHRLYHNTRDCTIPAYYKRCARLLTRLAMSPLCME 123
 
Name Accession Description Interval E-value
FAM150 pfam15129
FAM150 family; This family of proteins known as FAM150 is found in eukaryotes. Members of this ...
 58-126 2.75e-47

FAM150 family; This family of proteins known as FAM150 is found in eukaryotes. Members of this family are as yet uncharacterized. Proteins in this family are approximately 143 amino acids in length. The function of this family has not, as yet, been determined, however it is predicted to be a secretory protein family.


Pssm-ID: 464519  Cd Length: 124  Bit Score: 148.36  E-value: 2.75e-47
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1191692480  58 SRSTEIFPRDLTLKDKFIKHFTGPVTFSAECSKHFHRLYHNTRDCSTPAYYKRCARLLTRLAVSPLCSQ 126
Cdd:pfam15129  55 QRVIEIVPRDLRMKDKFIKHLTGPLYFSPKCRKHFHRLYHNTRDCTIPAYYKRCARLLTRLAMSPLCME 123
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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