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Conserved domains on  [gi|1433354131|ref|NP_001351984|]
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uncharacterized protein C9orf85 isoform 3 [Homo sapiens]

Protein Classification

DUF2039 domain-containing protein( domain architecture ID 10562929)

DUF2039 domain-containing protein similar to Homo sapiens protein C9orf85

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2039 pfam10217
Uncharacterized conserved protein (DUF2039); This entry is a region of approximately 100 ...
 8-83 3.78e-33

Uncharacterized conserved protein (DUF2039); This entry is a region of approximately 100 residues containing three pairs of cysteine residues. The region is conserved from plants to humans but its function is unknown.


:

Pssm-ID: 463003  Cd Length: 89  Bit Score: 111.61  E-value: 3.78e-33
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1433354131   8 HTAGVELQKINAKLHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 83
Cdd:pfam10217  14 HDKSKKTKKINALPISGVCQRCKDIIEWKKKYGKYKPLTQPGKCNKCQQKTVKKAYHVICDPCAKELKVCAKCGKP 89
 
Name Accession Description Interval E-value
DUF2039 pfam10217
Uncharacterized conserved protein (DUF2039); This entry is a region of approximately 100 ...
 8-83 3.78e-33

Uncharacterized conserved protein (DUF2039); This entry is a region of approximately 100 residues containing three pairs of cysteine residues. The region is conserved from plants to humans but its function is unknown.


Pssm-ID: 463003  Cd Length: 89  Bit Score: 111.61  E-value: 3.78e-33
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1433354131   8 HTAGVELQKINAKLHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 83
Cdd:pfam10217  14 HDKSKKTKKINALPISGVCQRCKDIIEWKKKYGKYKPLTQPGKCNKCQQKTVKKAYHVICDPCAKELKVCAKCGKP 89
 
Name Accession Description Interval E-value
DUF2039 pfam10217
Uncharacterized conserved protein (DUF2039); This entry is a region of approximately 100 ...
 8-83 3.78e-33

Uncharacterized conserved protein (DUF2039); This entry is a region of approximately 100 residues containing three pairs of cysteine residues. The region is conserved from plants to humans but its function is unknown.


Pssm-ID: 463003  Cd Length: 89  Bit Score: 111.61  E-value: 3.78e-33
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1433354131   8 HTAGVELQKINAKLHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 83
Cdd:pfam10217  14 HDKSKKTKKINALPISGVCQRCKDIIEWKKKYGKYKPLTQPGKCNKCQQKTVKKAYHVICDPCAKELKVCAKCGKP 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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