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Conserved domains on  [gi|17557710|ref|NP_507013|]
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Uncharacterized protein CELE_C06C6.9 [Caenorhabditis elegans]

Protein Classification

DUF1179 domain-containing protein( domain architecture ID 10535283)

DUF1179 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1179 pfam06678
Protein of unknown function (DUF1179); This family consists of several hypothetical ...
 2-94 3.43e-42

Protein of unknown function (DUF1179); This family consists of several hypothetical Caenorhabditis elegans proteins of around 106 residues in length. The function of the family is unknown.


:

Pssm-ID: 369033  Cd Length: 107  Bit Score: 133.87  E-value: 3.43e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17557710     2 FPFTTIFKSITLYFGPFLLLVVSIVNCQSKKKFKDDERANLVPRN-APVSPNPVKETSAQTCPTTQIPPAKTPMERSGSA 80
Cdd:pfam06678   1 FSFTTILKSIVLFFGPFLLLLVPIVNCSSKKKFETDGRADLVPKNvAPVRPGPVKESSKQAPPTAQTPPARTPVEKTGDV 80

                          90
                  ....*....|....
gi 17557710    81 VEDTLANVKSLPPE 94
Cdd:pfam06678  81 AEDTLANVKSLPPE 94
 
Name Accession Description Interval E-value
DUF1179 pfam06678
Protein of unknown function (DUF1179); This family consists of several hypothetical ...
 2-94 3.43e-42

Protein of unknown function (DUF1179); This family consists of several hypothetical Caenorhabditis elegans proteins of around 106 residues in length. The function of the family is unknown.


Pssm-ID: 369033  Cd Length: 107  Bit Score: 133.87  E-value: 3.43e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17557710     2 FPFTTIFKSITLYFGPFLLLVVSIVNCQSKKKFKDDERANLVPRN-APVSPNPVKETSAQTCPTTQIPPAKTPMERSGSA 80
Cdd:pfam06678   1 FSFTTILKSIVLFFGPFLLLLVPIVNCSSKKKFETDGRADLVPKNvAPVRPGPVKESSKQAPPTAQTPPARTPVEKTGDV 80

                          90
                  ....*....|....
gi 17557710    81 VEDTLANVKSLPPE 94
Cdd:pfam06678  81 AEDTLANVKSLPPE 94
 
Name Accession Description Interval E-value
DUF1179 pfam06678
Protein of unknown function (DUF1179); This family consists of several hypothetical ...
 2-94 3.43e-42

Protein of unknown function (DUF1179); This family consists of several hypothetical Caenorhabditis elegans proteins of around 106 residues in length. The function of the family is unknown.


Pssm-ID: 369033  Cd Length: 107  Bit Score: 133.87  E-value: 3.43e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17557710     2 FPFTTIFKSITLYFGPFLLLVVSIVNCQSKKKFKDDERANLVPRN-APVSPNPVKETSAQTCPTTQIPPAKTPMERSGSA 80
Cdd:pfam06678   1 FSFTTILKSIVLFFGPFLLLLVPIVNCSSKKKFETDGRADLVPKNvAPVRPGPVKESSKQAPPTAQTPPARTPVEKTGDV 80

                          90
                  ....*....|....
gi 17557710    81 VEDTLANVKSLPPE 94
Cdd:pfam06678  81 AEDTLANVKSLPPE 94
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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