|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 704.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 1 MLKILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNFNLNFFTDPLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 81 QFHLMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 161 LVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 241 YGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 321 LTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 75047769 401 VITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLILGVAY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 614.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 1 MLKILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNFNLNFFTDPLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 81 QFHLMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 161 LVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 241 YGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 321 LTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 75047769 401 VITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLILG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 571.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 1 MLKILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNFNLNFFTDPLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 81 QFHLMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 161 LVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 241 YGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 321 LTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 75047769 401 VITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLILGV 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
3.35e-176 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 501.41 E-value: 3.35e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 1 MLKILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNF-NLNFFTDPLSSPLLVLSCWLLPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSlNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 80 SQFHLMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 160 LLVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 240 GYGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 320 GLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 75047769 400 TVITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLILG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
1.20e-160 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 461.72 E-value: 1.20e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 3 KILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNF-NLNFFTDPLSSPLLVLSCWLLPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 82 FHLMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 162 VALIFTQAQMGSLhilLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSL---SLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 242 GILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 322 TSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTV 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 75047769 402 ITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.42e-144 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 420.54 E-value: 2.42e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 1 MLKILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNF-NLNFFTDPLSSPLLVLSCWLLPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNlSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 80 SQFHLMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 160 LLVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 240 GYGILRIIIIL-EPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIA 318
Cdd:MTH00044 241 GYGLIRLINLFsLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 319 HGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 75047769 399 NTVITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLIL 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
42-435 |
2.38e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 342.20 E-value: 2.38e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 42 LNQHMDLGLNFNLNFFTDPLSSPLLVLSCWLLPLMILASQFhlMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYIL 121
Cdd:MTH00150 6 LYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 122 FETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWsndILWLACMM 201
Cdd:MTH00150 84 FEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 202 AFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTD 281
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 282 LKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLL 361
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 75047769 362 ASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHM 435
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEML 394
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
2.00e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 335.59 E-value: 2.00e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 1 MLKILLPTVMLLPLISFSKKEWMWINSsaysILISSLSLLTLNQHMDLGLNFNLNFFTDPLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSL----LFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 81 QFHLMNEstTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPL 160
Cdd:MTH00163 77 ESVYKKN--NYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 161 LVALIFTQAQMGSLHILLLTLTpnpllnSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 241 YGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 321 LTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430
....*....|....*....|....*....|....*..
gi 75047769 401 VITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIM 437
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-454 |
3.15e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 317.31 E-value: 3.15e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 8 TVMLLPLISFSKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNFNLNFFTDPLSSPLLVLSCWLLPLMILASQFHLMNE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 88 STthKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFT 167
Cdd:MTH00205 85 KN--SKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 168 QAQMGSLHILLLTLTPNPLLNSWsndILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRII 247
Cdd:MTH00205 163 NSLNFSLSMFFNFPLNFSDFYLF---LYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRIT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 248 IILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLF 327
Cdd:MTH00205 240 SMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 328 RLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYS 407
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 75047769 408 LYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLI 454
Cdd:MTH00205 400 LYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
1.48e-102 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 313.22 E-value: 1.48e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 1 MLKILLPTVMLLPLISFsKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNFNLNFFTDPLSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLI-KYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 81 QFHLMNESTTHkrMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 161 LVALIFTQAQMGSLHILLLTLTPNPLLNSwsnDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 241 YGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 321 LTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 75047769 401 VITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKLI 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
52-457 |
4.05e-84 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 266.95 E-value: 4.05e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 52 FNLNFFT--DPLSSPLLVLSCWLLPLMILASqfhlMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPT 129
Cdd:COG1008 72 LGISYHLgvDGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPM 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 130 LIIIARWGNQtERLNAGLYFLFYTLLGSLPLLVALI--FTQAQMGSLHILLLTLTPNPLLNSWsndILWLACMMAFLVKM 207
Cdd:COG1008 148 YFLIGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILalYFLAGALTFDIAELAAAPLPLTAQL---LLFLAFFIAFAVKV 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 208 PLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEP-ISKLMAYPFIILATWGMIMTSSICLRQTDLKSLI 286
Cdd:COG1008 224 PMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 287 AYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLAN 366
Cdd:COG1008 304 AYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALAS 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 367 LGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLIL 446
Cdd:COG1008 384 LGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILL 463
|
410
....*....|.
gi 75047769 447 LTLNPKLILGV 457
Cdd:COG1008 464 LGLYPQPLLDL 474
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-457 |
1.00e-77 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 250.50 E-value: 1.00e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 59 DPLSSPLLVLSCWLLPLMILASqfhlMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLAS----WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 139 QTERLNAGLYFLFYTLLGSLPLLVALIF----TQAQMGSLHILLLTLTPNPLLNSWsndILWLACMMAFLVKMPLYGFHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLLNLPLPPGVQY---WLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEP-ISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 294 MGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 374 NLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPKL 453
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
....
gi 75047769 454 ILGV 457
Cdd:PRK05846 473 LLDV 476
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
47-457 |
2.55e-74 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 241.00 E-value: 2.55e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 47 DLGLNFNLNffTDPLSSPLLVLSCWLLPLMILASQFHLMNEStthkRMYLILLVSLQVALLMAFSAVEFMMYYILFETTL 126
Cdd:TIGR01972 66 ALGISYHLG--VDGISLLLVLLTALLTLLAILASWESIQKRV----KEFYALLLLLEAGVIGVFLALDLFLFYVFWEAML 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 127 IPTLIIIARWGNQTeRLNAGLYFLFYTLLGSLPLLVALIFTQAQMGslHILLLTLTPNPLLNSWSNDILWLACMMAFLVK 206
Cdd:TIGR01972 140 IPMYLLIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGG--GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 207 MPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEP-ISKLMAYPFIILATWGMIMTSSICLRQTDLKSL 285
Cdd:TIGR01972 217 VPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 286 IAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLA 365
Cdd:TIGR01972 297 IAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMA 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 366 NLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMTTHSLSINPTF-TREHMIMALHLLPL 444
Cdd:TIGR01972 377 SLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLnGREIAVLAPLVVLI 456
|
410
....*....|...
gi 75047769 445 ILLTLNPKLILGV 457
Cdd:TIGR01972 457 LFLGLYPNPLLDL 469
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.67e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.57 E-value: 1.67e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 112 AVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 192 NDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFIILATWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 272 TSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLA-NTNYERAHSRTMVLIRGLQM 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 75047769 351 VLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-424 |
6.18e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 216.85 E-value: 6.18e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 53 NLNFFTDPLSSPLLVLSCWLLPLMILASQfhlmNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLII 132
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISW----KSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 133 IARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSL-HILLLTLTPNPLLNSWsndiLWLACMMAFLVKMPLYG 211
Cdd:MTH00204 152 IGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKW----LLVGFFLSLAVKIPQIP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 212 FHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFII-LATWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:MTH00204 228 FHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 291 VSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLP 370
Cdd:MTH00204 308 VAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 75047769 371 PTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMTTHSL 424
Cdd:MTH00204 388 LSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLL 441
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
54-414 |
1.17e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 210.68 E-value: 1.17e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 54 LNFFTDPLSSPLLVLSCWLLPLMILASqfhlMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIII 133
Cdd:MTH00217 74 VVFAVDGISIFFLILTALLTPICILIS----WNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 134 ARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWsndILWLACMMAFLVKMPLYGFH 213
Cdd:MTH00217 150 GIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQY---FIFLGFFLSLAIKIPKIPFH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFI-ILATWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:MTH00217 227 IWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSVA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 293 HMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPT 372
Cdd:MTH00217 307 HMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLS 386
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 75047769 373 INLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSV 414
Cdd:MTH00217 387 CNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRV 428
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
54-457 |
6.08e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 204.00 E-value: 6.08e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 54 LNFFTDPLSSPLLVLSCWLLPLMILASqfhlMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIII 133
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILIS----WHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 134 ARWGNQTERLNAGLYFLFYTLLGSLPLLVALiFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFH 213
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCL-FSLYNIHGTTDYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFII-LATWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 293 HMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPT 372
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 373 INLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMTTHSLSINPTFTREHMIMALHLLPLILLTLNPK 452
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPI 490
|
....*
gi 75047769 453 LILGV 457
Cdd:MTH00226 491 FILEV 495
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
96-427 |
4.40e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 170.09 E-value: 4.40e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 96 LILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVaLIFTQAQMGSLh 175
Cdd:MTH00094 65 LILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLF-VYLKNFFFFSL- 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 176 illltlTPNPLLNSWsndILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILepiSK 255
Cdd:MTH00094 143 ------CYFDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL---NF 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 256 LMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYE 335
Cdd:MTH00094 211 VYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYH 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 336 RAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQ 415
Cdd:MTH00094 291 ISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSF 370
|
330
....*....|..
gi 75047769 416 RGKMTTHSLSIN 427
Cdd:MTH00094 371 MGKKFSNFNNFN 382
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
47-420 |
3.86e-46 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 166.80 E-value: 3.86e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 47 DLGLNFNLNffTDPLSSPLLVLSCWLLPLMILASqfhlmNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTL 126
Cdd:PRK06473 68 SLGLSYHLG--VDGLSLPLLVLNSLLTLIAIYSS-----DESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELEL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 127 IPTLIIIARWGNQtERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSwSNDILWLACMMAFLVK 206
Cdd:PRK06473 141 IPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIK 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 207 MPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFiiLATWGMIMT---SSICLRQTDLK 283
Cdd:PRK06473 219 IPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVSVlygASCAIAQKDMK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 284 SLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGL---QMVLPLMSSWWL 360
Cdd:PRK06473 297 KMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMI 376
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 361 LASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMT 420
Cdd:PRK06473 377 LGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLT 436
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-418 |
1.59e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 162.51 E-value: 1.59e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 48 LGLNFNLNffTDPLSSPLLVLSCWLLPLMILASQfhlmneSTTHK-RMYLILLVSLQVALLMAFSAVEFMMYYILFETTL 126
Cdd:PRK12561 49 IGLEWSLG--VDGLSMPLVLLSGLITTLSIFASW------KVTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELEL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 127 IPTLIIIARWGNQtERLNAGLYFLFYTLLGSLPLLVA----------LIFTQAQMGSLHILLLTLTpnpllnswsndILW 196
Cdd:PRK12561 121 VPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAglalalsgdtFTFDLAELGAKSYPLALEL-----------LLY 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 197 LACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYP-FIILATWGMIMTSSI 275
Cdd:PRK12561 189 AGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGVVNIIYGALN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 276 CLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLM 355
Cdd:PRK12561 269 AFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKT 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 356 SSWWLLASLANLGLPPTINLISELMIIV-----SAFSWS--NLTLILLGLNTVITAIYSLYMLTSVQRGK 418
Cdd:PRK12561 349 FALFTASSMASLALPGMSGFVSELTVFLgitssDVYSSTfrTITILLAAVGLILTPIYLLSMLRRVFYGP 418
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-415 |
1.23e-41 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 152.99 E-value: 1.23e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 52 FNLNFFTDPLSSPLLVLSCWLLPLMILASqFHLMNESTTHKRMYLILLVSLqVALLMAFSAVEFMMYYILFETTLIPTLI 131
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYS-IGYMRHERRGRRFYPLFLLLL-AGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 132 IIARWGNQtERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWSNdILWLACMMAFLVKMPLYG 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 212 FHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIIL--EPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 290 SVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 75047769 370 PPTINLISELMIIVSAFSWSNLTL-ILLGLNTVITAIYSLYMLTSVQ 415
Cdd:COG0651 384 PPLSGFVSKWLLLQAALEAGAWLLaAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-418 |
8.97e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 138.69 E-value: 8.97e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 47 DLGLNFNLNffTDPLSSPLLVLSCWLLPLMILASQfhlmnESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTL 126
Cdd:PRK02546 76 QLGLTWSVG--ADGLSMPLILLTGFITTLAVLAAW-----PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELEL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 127 IPTLIIIARWGNQtERLNAGLYFLFYTLLGSLPLLVAlIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVK 206
Cdd:PRK02546 149 IPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLA-ALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 207 MPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYP-FIILATWGMIMTSSICLRQTDLKSL 285
Cdd:PRK02546 227 LPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 286 IAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLA 365
Cdd:PRK02546 307 IAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLA 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 366 NLGLPPTINLISELMIIVS-------AFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGK 418
Cdd:PRK02546 387 SLALPGMSGFVAELMVFVGfatsdayTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGP 446
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-422 |
2.92e-35 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 136.77 E-value: 2.92e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 48 LGLNFNLNffTDPLSSPLLVLSCWLLPLMILASqfhlmNESTTHKRMY--LILLVSLQVAllMAFSAVEFMMYYILFETT 125
Cdd:PRK07363 69 LGLSYSLG--VDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYysLILLINGGIA--GALLAQNLLLFFLFYELE 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 126 LIPTLIIIARWGNQtERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSwSNDILWLACMMAFLV 205
Cdd:PRK07363 140 LIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 206 KMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPfiILATWGMIMT---SSICLRQTDL 282
Cdd:PRK07363 218 KIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 283 KSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMV---LPLMSSWW 359
Cdd:PRK07363 296 KRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALL 375
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 75047769 360 LLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSLYMLTSVQRGKMTTH 422
Cdd:PRK07363 376 VLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
50-411 |
8.03e-34 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 132.76 E-value: 8.03e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 50 LNFNLNFFTDPLSSPLLVLSCWLLPLMILASQfhlmnESTTHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPT 129
Cdd:CHL00011 74 FDFHWRLGIDGLSIGPILLTGFITTLATLAAW-----PVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 130 LIIIARWGNQtERLNAGLYFLFYTLLGSLPLLVAlIFTQAQMGSLHILLLTLTPNPLLNSWSNDIL-WLACMMAFLVKMP 208
Cdd:CHL00011 149 YLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIG-VLGMGLYGSNEPTLNFETLANQSYPVALEILfYIGFLIAYAVKLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 209 LYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPF-IILATWGMIMTSSICLRQTDLKSLIA 287
Cdd:CHL00011 227 IIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 288 YSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERahSRTMVL--IRGLQMVLPLMSSWWLLASLA 365
Cdd:CHL00011 307 YSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDR--IRLVYLdeMGGIAIPMPKIFTMFSSFSMA 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 75047769 366 NLGLPPTINLISELMI---IVSAFSWSNLTLILL----GLNTVITAIYSLYML 411
Cdd:CHL00011 385 SLALPGMSGFVAELIVffgIITSQKYLLMPKILItfvmAIGMILTPIYLLSML 437
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-406 |
1.86e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 111.51 E-value: 1.86e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 56 FFTDPLSSPLLVLScwlLPLMILASQFHLMNESTTHKRMYLILLVSLQVALLMAFSAVEFMMYyILFETTLIPTLIIIAR 135
Cdd:PRK08375 73 LRADSLSALFLLVT---SILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLF-VFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 136 WGNQtERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNpllnswSNDILWLA---CMMAFLVKMPLYGF 212
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAfgfVLLALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIII----ILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAY 288
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 289 SSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLG 368
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIG 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 75047769 369 LPPTINLISELMIIVSAFS---WSNLTLILLGlnTVITAIY 406
Cdd:PRK08375 382 VPPTSGFVSKWYLVVGAVEagqWLVLAVLLAS--SLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-411 |
5.72e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 110.45 E-value: 5.72e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 59 DPLSSPLLVLSCWLLPLMILASQFHLMNESttHKRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHES--GPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 139 QTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNS----------WSNDILWLACMMAFLVKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPltgglagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 209 LYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRII-------IILEPISKLMAYPFIILATWGMIMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 282 LKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 75047769 362 ASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLntVITAIYSLYML 411
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLL--IASAISLVGYF 446
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
213-405 |
3.42e-22 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 98.85 E-value: 3.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILE--PISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 291 VSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLP 370
Cdd:PRK06458 314 IEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
170 180 190
....*....|....*....|....*....|....*...
gi 75047769 371 PTINLISELMIIVSAFS---WSNLTLILLGLNTVITAI 405
Cdd:PRK06458 394 PFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL 431
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
6.39e-21 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 87.58 E-value: 6.39e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 1 MLKILLPTVMLLPLISFSKKEWMWINSSAYSILISSLSLLTLNQHMDLGLNF-NLNFFTDPLSSPLLVLSCWLLPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNlSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 75047769 80 SQFHLMNESTTHKRMYLILLVSLQVALLMA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
72-395 |
2.35e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 80.74 E-value: 2.35e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 72 LLPLMI-LASQFHLMNESTTHKRMYLILlvSLQVALLmAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFL 150
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFFLFL--SLIFSIL-CFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 151 FYTLLGSLPLLVALIFTQAQMGSLHIllltlTPNPLLNSWSNDILWLACMMaFLVKMPLYGFHLWLPKAHVEAPIAGSMV 230
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFNF-----SDWGSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 231 LAAILLKLGGYGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLrqtDLKSLIAYSSVSHMgLVVAASLIQTPWGFM 310
Cdd:MTH00062 203 LSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSI 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 311 G-ATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWS 389
Cdd:MTH00062 279 NlSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVL 358
|
....*.
gi 75047769 390 NLTLIL 395
Cdd:MTH00062 359 VYLLFW 364
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
72-387 |
3.61e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 3.61e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 72 LLPLMILASQFHLMNESTTHKRMYLILLVSLQVA-LLMAFSAVEFMMYYILFETTLIPTLIIIArWGNQTERLNAGLYFL 150
Cdd:PRK08668 76 MISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAgVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 151 FyTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMV 230
Cdd:PRK08668 155 L-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAV 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 231 LAAILLKLGGYGILRIIIILePISKLMA------------YPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVV 298
Cdd:PRK08668 234 LSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvplfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYIL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 299 AASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISE 378
Cdd:PRK08668 313 VGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
....*....
gi 75047769 379 LMIIVSAFS 387
Cdd:PRK08668 393 WLIFEALIS 401
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-403 |
2.21e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 78.07 E-value: 2.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 51 NFNLNFFTDPLSSPLLVLSCwllpLMILASQFHLMNESTThkRMYLILLVSLQVALLMAFSAVEFMMYYILFETTLIPTL 130
Cdd:PRK07234 58 NFGVTLRADALSGYFILTNA----LVTLAVIFYCWESAKT--RFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATF 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 131 IIIArWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTpnpllnswsnDILWLACM-MAFLVKMPL 209
Cdd:PRK07234 132 LLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATA----------DPEAFALIaLGLLVKGGI 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 210 YGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFIILATWGmimtSSICLRQTDLKSLIAYS 289
Cdd:PRK07234 201 FVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFS 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 290 SVSHMGLVVAASLIQtpwGFMGatammIAHGLTSTMLFRLANTNYERAHS--RTMVLIRGLQMVLplmsswwLLASLANL 367
Cdd:PRK07234 277 TISQLGFILAAPLVG---GLYA-----LAHGLVKSTLFLCAGALPSRNFTelISQMLGIGKWIPL-------TMASFSIA 341
|
330 340 350
....*....|....*....|....*....|....*.
gi 75047769 368 GLPPTINLISELMIIVSAFSWSNLTLILLGLNTVIT 403
Cdd:PRK07234 342 GFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
48-398 |
3.88e-15 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 77.32 E-value: 3.88e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 48 LGLNFNLNFFTDPLSSPLLVLSCWLLPLMILASQFHLMNESTTH------KRMYLILLVSLQVALLMAFSaVEFMMYYIL 121
Cdd:PRK06525 63 LGDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGNREHpvhegtGRYYAFLLLFIGAMAGLVYS-STLLGLLLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 122 FETTLIPTLIIIARWGNQtERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPllnswSNDILWLACMM 201
Cdd:PRK06525 142 FEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS-----LKYLVFLGILF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 202 AFLVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQT 280
Cdd:PRK06525 216 AAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 281 DLKSLIAYSSVSHMGLVVAA---SLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSS 357
Cdd:PRK06525 295 DMKRLLAYSTITQLGYMFFGlslAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGV 374
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 75047769 358 WWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGL 398
Cdd:PRK06525 375 GFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPA 415
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
97-377 |
2.50e-14 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 75.46 E-value: 2.50e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 97 ILLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTErlNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHI 176
Cdd:PRK12650 114 LLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 177 LLLTLTPnpllnSWSND------ILWLACMMAFlVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIIL 250
Cdd:PRK12650 192 SGILHSD-----VWAEKpglttvVAVLIAVAAF-TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 251 EPIsklmAYPFIILATWGM---IMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLF 327
Cdd:PRK12650 266 HDV----AVWNWLLIIVGMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLF 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 75047769 328 RLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLIS 377
Cdd:PRK12650 342 MLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVS 391
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-407 |
5.14e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 73.70 E-value: 5.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 44 QHMDLGlNFNLNFFTDPLSSPLLVLSCWLLPLMILASQFHLMNESTTHK-RMYLILLVSLQVALLMAFSAVEFMMYyILF 122
Cdd:PRK06589 68 ELMDFG-NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSsRFLFFFNLTILIGVLIALSSDLFTMF-VCY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 123 ETTLIPTLIIIArWGNQTERLNAGLYFLFYTLLGSLPL-LVALIFTQAQMGSLHILLLTLTpnpllnSWSNDILWLACMM 201
Cdd:PRK06589 146 ELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLF------SKNQSIILLLMFI 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 202 AFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAY-----PFIILATWGMIMTSSIC 276
Cdd:PRK06589 219 YGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSLKA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 277 LRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMS 356
Cdd:PRK06589 299 LKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLIS 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 75047769 357 SWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTL-ILLGLNTVITAIYS 407
Cdd:PRK06589 379 FIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLsIIVMLVVIASSILS 430
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
203-416 |
5.86e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 73.64 E-value: 5.86e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 203 FLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPiSKLMAYPFIILATWGMIMTSSIC---LRQ 279
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQ-SGAAEQFSNVLIGLGIFSIAVAAfsmLSQ 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 280 TDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWW 359
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGV 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 75047769 360 LLASLANLGLPPTINLISELMIIVSAFSWSN-LTLILLGLNTVITAIYSLYMLTSVQR 416
Cdd:PRK08676 375 ILGSAAIIGMPPFPLFLSKFFILLQLGGISVwLVLAVLLLLLLAASSFAIFLLKAFTR 432
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
200-406 |
1.32e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 72.49 E-value: 1.32e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 200 MMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYP--FIILATWGMIMTSSICL 277
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLklVIIMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 278 RQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSS 357
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 75047769 358 WWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLN-TVITAIY 406
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGaSVVEAVY 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
63-408 |
1.37e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 72.82 E-value: 1.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 63 SPLLVLSCWLLPLMILASQFHLMNESTTHKRMYLILLVsLQVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTER 142
Cdd:PRK08376 92 GAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILL-LELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 143 LNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLAcMMAFLVKMPLYGFHLWLPKAHVE 222
Cdd:PRK08376 171 IEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALF-IAGLAMKSGAVPVHMWLPDAYPA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 223 APIAGSMVLAAIllKLGG-YGILRIIIILEPIS---KLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMG--- 295
Cdd:PRK08376 250 APSSISAMLLVI--KQAGlYALARVLFSIYGPAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGyml 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 296 ------LVVAASLIQTPWGFM---GATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLAN 366
Cdd:PRK08376 328 lglgvgLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAI 407
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 75047769 367 LGLPPTINLISELMIIVSAFSWSNltliLLGLNTVITAIYSL 408
Cdd:PRK08376 408 VGLPPFNGFASKWLIYESSALFNP----ILGVIAMIGSVLTL 445
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-397 |
8.40e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 70.15 E-value: 8.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 119 YILFETTLIPTLIIIARwGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 199 CMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIII-----LEPISKLMAYPFIILATWGMIMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 274 SICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLP 353
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMP 374
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 75047769 354 LMSSWWLLASLANLGLPPTINLISELMI---IVSAFSWSNLTLILLG 397
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYIldaFIKSNAWIGLVVLLVG 421
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
50-424 |
1.61e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 69.78 E-value: 1.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 50 LNFNLNFFTDPLSSPL-LVLSCWLLPLMILASQFhLMNESTTHKRMYLILLVsLQVALLMAFSAVEFMMYYILFETTLIP 128
Cdd:PRK12646 68 LDINLDLRLDGLSLMFsLIISLIGIAVFFYATQY-LSSRKDNLPRFYFYLTL-FMFSMIGIVLSDNTILMYVFWELTSVS 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 129 TLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLlnswSNDILWLACMMAFLV--- 205
Cdd:PRK12646 146 SFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI----KNHGLFIPMIFMFLLgaf 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 206 -KMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGILRIIIILEpISKLMAYPFIILATWGMIMTSSICLRQTDLK 283
Cdd:PRK12646 222 tKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLK 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 284 SLIAYSSVSHMGLVVA-----ASLIQTPWGFMGATAMMIA---------HGLTSTMLFRLANTNYERAHSRTMVLIRGLQ 349
Cdd:PRK12646 300 GILAYSTISQLGMIMAmvgigGGYAQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMR 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 350 MVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAI----------YSLYMLTSVQRGKM 419
Cdd:PRK12646 380 QLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIVFIgviasiftftYALYMVKEVFWGKY 459
|
....*
gi 75047769 420 TTHSL 424
Cdd:PRK12646 460 DSKVF 464
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
212-411 |
2.59e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 68.64 E-value: 2.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 212 FHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGILRIIIILEpISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:COG1009 230 LHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 291 VSHMGLVVAASLIQtpwGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLP 370
Cdd:COG1009 308 VSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIP 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 75047769 371 PTINLISELMIIVSAFSWSNLTLILLGLNTV---ITAIYSLYML 411
Cdd:COG1009 385 PFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLF 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
49-408 |
1.00e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 66.68 E-value: 1.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 49 GLNFNLNFFTDPLSSPLLVLSCWLLPLMILASQFHLMNESTTHKRMYLILLVSLQVALLMAfSAVEFMMYYILFETTLIP 128
Cdd:COG1007 59 GTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLS 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 129 TLIIIARWGNQTERLNAGL-YFLFYTLLGSLPLL-VALIFtqAQMGSLHILLLTLTPNPLLNSwsNDILWLACMM---AF 203
Cdd:COG1007 138 LYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLY--GATGSLNLAGIAAALAAGGAN--SPLLLLGLVLvlaGL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 204 LVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILlKLGGYGIL-RIIII-LEPISKLMAYPFIILATWGMIMTSSICLRQTD 281
Cdd:COG1007 214 AFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAALlRLLVEaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTN 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 282 LKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFR-LANTNYERAHSRTMVLIRGLQMVLPLMSSWWL 360
Cdd:COG1007 293 VKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAvILLLSRKGGEAEEIEDLAGLARRSPLLALAMT 372
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 75047769 361 LASLANLGLPPTINLISELMIIVSAFSWSNLTLILLG-LNTVITAIYSL 408
Cdd:COG1007 373 IFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAvLNSVISAYYYL 421
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-413 |
1.46e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 66.68 E-value: 1.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 52 FNLNFFTDPLSSPLLVLSCWLLPLMILASQFHLMNESTTHKRMYLILLVSLQV-ALLMAFSAVEFMMYYILFETTLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFIlSMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 131 IIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWsndilwLACMMAFLVKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 211 GFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRiiIILEPISKLMAYPFIILaTWGMI---MTSSICLRQTDLKSLIA 287
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLIL-LAGSIsalLGVIYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 288 YSSVSHMGLVVAASLIQTPWGFMG--ATAMM---------IAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMS 356
Cdd:PRK08667 300 YSSIENIGIILMGIGLYVIFGVYGldTLALLalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTS 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 75047769 357 SWWLLASLANLGLPPTINLISELMIIVSAFswSNLTLILLGLNTVITAIYSLYMLTS 413
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLLYESFF--QSFSVADPLIKILLFSVLAIFALTS 434
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
57-408 |
3.69e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 64.97 E-value: 3.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 57 FTDPLSSPLLVLSCWLLPLMILASQFHLMNESttHKRMYLI-LLVSLQVALLMAFSAVEFMMYYILFETTLIPTLIIIAr 135
Cdd:PRK12663 73 FTGDSLSALMVTTASFVATAIMAYGFGDIEHS--GRRYGFPpFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT- 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 136 WGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILWLACMMAFLVKMPLYGFHlW 215
Cdd:PRK12663 150 LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-W 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 216 LPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFI-ILATWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK12663 229 LPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLaTMAAITMVIGALGALAYKDIRRIAGYQVISSI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 295 GLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTIN 374
Cdd:PRK12663 309 GFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSG 388
|
330 340 350
....*....|....*....|....*....|....
gi 75047769 375 LISELMIIVSAFSWSNLTLILLGLNTVITAIYSL 408
Cdd:PRK12663 389 FWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
212-380 |
1.28e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 63.78 E-value: 1.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 212 FHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGILRiiiiLEPISKLMAYPFIILATWG---MIMTSSICLRQTDLKSLIA 287
Cdd:PRK12647 214 FHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 288 YSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANL 367
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
170
....*....|....
gi 75047769 368 GLPPTINLIS-ELM 380
Cdd:PRK12647 369 GLPPLFGFLAkELI 382
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-414 |
1.36e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.98 E-value: 1.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 94 MYLILLVSLQvallMAFSAVEFMMYYILFETTLIPTLIIIARwGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGS 173
Cdd:PRK12665 116 TYLILVAGVS----NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 174 LHILLLTLTPNPLLnSWSNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPI 253
Cdd:PRK12665 191 LNMADLAVRLDELP-SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 254 SKLMAyPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTN 333
Cdd:PRK12665 270 GGLDT-LLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLI 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 334 YERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMII---VSAFSWSNLTLILLGlntVITAIYSLYM 410
Cdd:PRK12665 349 ERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagAEDGTWLAWALVAGG---VVTSLLTLYA 425
|
....
gi 75047769 411 LTSV 414
Cdd:PRK12665 426 VARV 429
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-408 |
8.87e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 57.27 E-value: 8.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 95 YLILLVSLQVALLMAfSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSL 174
Cdd:TIGR01770 105 YILLLFALLGIFLLV-SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 175 HILLLTLTPNPLLNSWSNDILWLACMM-AFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAaILLKLGGYGI-LRIII-ILE 251
Cdd:TIGR01770 184 NFEDLLLFLSNGMLNISLLLLGIVLILvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAVfLRLFLyILF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 252 PISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTS----TMLF 327
Cdd:TIGR01770 263 GFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLS 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 328 RLANTNYERAHSrtMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLG-LNTVITAIY 406
Cdd:TIGR01770 343 LLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAvLTSVIGAFY 420
|
..
gi 75047769 407 SL 408
Cdd:TIGR01770 421 YL 422
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
104-398 |
1.22e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 57.21 E-value: 1.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 104 VALLMAFSAVEFMmyyILFET-TLIPTLIIIArwgNQTERLN--AGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLT 180
Cdd:PRK06521 127 VLVLLADDAFSFL---VAWETmSLSSWFLVIA---NHREAEIrrAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 181 LTPNPLLnsWSNDILWLAcMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIII-ILEPISKLMAY 259
Cdd:PRK06521 201 AAHLSPF--WASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 260 PFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLV----------------VAASLiqtpwGFMGATAMMIAHGLTS 323
Cdd:PRK06521 278 LVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIfvglglamvfiaygmpLLAAL-----ALTAALYHLLNHALFK 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 75047769 324 TMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGL 398
Cdd:PRK06521 353 SLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSPGLPQWGLKL 427
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-380 |
1.44e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 57.15 E-value: 1.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 93 RMYLILLVSLQVALLMAFSAVEFMMYyILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMG 172
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 173 SLHILLLTLTPNPLLNSWSNDILWLACMMAFL---VKMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGILRIii 248
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARI-- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 249 ilEPISKLMAYPFIILATWGMI---MTSSICLRQTDLKSLIAYSSVSHMGLVVA----ASLIQTPWGFMGATAMMIAHGL 321
Cdd:PRK12649 268 --HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 75047769 322 TSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELM 380
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
129-327 |
2.71e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 56.06 E-value: 2.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 129 TLIIIARWGNQTERlnAGL-YFLFYTLLGSLpLLVALIFTQAQMGSLhillltltPNPLLNSWSNDILWLAcMMAFLVKM 207
Cdd:PRK12668 130 TFLVWARGTKAAVR--AGFrYLLVHVLGGVL-LLAGILLHYAETGSF--------AFGAIAGLGGTAAWLI-LIGFGVNA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 208 PLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRiiiilepisklmAYP-FIILATWGMIMT---SSICLRQTDLK 283
Cdd:PRK12668 198 AFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR------------AFPgTELLIYIGAAMAvygVFFALLENDLR 265
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 75047769 284 SLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLF 327
Cdd:PRK12668 266 RLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-408 |
4.39e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 55.34 E-value: 4.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 203 FLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFI-ILATWGMIMTSSICLRQTD 281
Cdd:PRK07691 219 FATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVAYFD 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 282 LKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLL 361
Cdd:PRK07691 299 IKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 75047769 362 ASLANLGLPPTINLISELMIIVSAFSWSNLTLILLGLNTVITAIYSL 408
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
212-411 |
8.22e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.93 E-value: 8.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 212 FHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGILRiiiilepisklMAYPF----------IILATWGMIMTSSICLRQT 280
Cdd:PRK12644 222 FHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR-----------LAPGFadvpvwrptvLVLGLATMLLGGWRALRQH 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 281 DLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWL 360
Cdd:PRK12644 290 DLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAA 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 75047769 361 LASLANLGLPPTINLIS-----ELMIIVSAFSW-SNLTLILLGLNTVITAIYSLYML 411
Cdd:PRK12644 370 LAAASMAGLPPLLGFVAkeaalEAVLHDGALGPaGPVVLAGIVLGSILTVAYSLRFL 426
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
195-412 |
1.47e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 53.87 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 195 LWLACMMAFLVKM---------PLygfHLWLPKAhVEAPI-------AGSMVLAAILLklggygILRIIIILEPISKLMa 258
Cdd:PRK07376 223 GWLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL------VARMYPVFEQFPAVM- 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 259 ypfIILATWGMI---MTSSICLRQTDLKSLIAYSSVSHMGLVVAAsliqtpwgfMGATAM------MIAHGLTSTMLFRL 329
Cdd:PRK07376 292 ---TVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMA---------MGCGAYsaglfhLMTHAYFKAMLFLG 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 330 ANT---------NYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSwSNLTLILLGLNT 400
Cdd:PRK07376 360 SGSvihgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE-ANPALWFVGFLT 438
|
250
....*....|....*
gi 75047769 401 V-ITAIY--SLYMLT 412
Cdd:PRK07376 439 AgMTAFYmfRMYFLT 453
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
94-408 |
2.94e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 52.52 E-value: 2.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 94 MYLILLVSLQVALLMAfSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGS 173
Cdd:PRK05777 105 FYLLVLFALLGMMVMV-SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 174 LHILLLTLTPNPLLNSwsNDILWLACMM---AFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILlKLGGYGI-LRI-II 248
Cdd:PRK05777 184 LSFAGIAKALADGSGN--SLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLlVV 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 249 ILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTS----T 324
Cdd:PRK05777 261 AFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTlgafG 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 325 MLFRLANTNYERAHSRTMvliRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILLG-LNTVIT 403
Cdd:PRK05777 341 VISLLRRKGGEAESISDF---AGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGvLNSAIG 417
|
....*
gi 75047769 404 AIYSL 408
Cdd:PRK05777 418 AFYYL 422
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
91-403 |
7.19e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 51.71 E-value: 7.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 91 HKRMYLILLVSLQV-ALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTErlnAGLYFLFYTLLGSLPLLVALIFTQA 169
Cdd:PRK06459 69 HYGKWLSSLYILTIlGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 170 QMGSLHILLLTLTPNPLLNSwsndilwlacmMAFLVKMPLYGFHL--WLPKAHVEAPIAGSMVLAAILLKLGGYGILRII 247
Cdd:PRK06459 146 ISGTTNFSYLPSPVPLILAS-----------FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMT 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 248 IILEPISKL-MAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAA--------SLIQTPWGFMGATAMM-- 316
Cdd:PRK06459 215 ILTQTIPIGyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVAlglymvtkQLITSIEHFSLITVILys 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 317 IAHGLTSTMLFrLANTNYERAHSRTMVLIRGLQMVLPLmsswwLLASLANLGLPPTINLISELMIIVSAFSWSNLTLILL 396
Cdd:PRK06459 295 FAHSVAKTGLF-LSSGLQEKQSITYSKKIRNRWIELGL-----TLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVI 368
|
....*..
gi 75047769 397 GLNTVIT 403
Cdd:PRK06459 369 SILFIVT 375
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-390 |
5.89e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 48.67 E-value: 5.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 155 LGSLPLLVALIFTQAQMGSLHILLLTLTPNPLLNswsNDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAI 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPL---GSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 235 LLKLGGYGILRIIIILEPISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGL--------VVAASLIQTP 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIillglgagVTGIALEQPA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 307 W---GFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIV 383
Cdd:PRK08042 302 LialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
....*..
gi 75047769 384 SAFSWSN 390
Cdd:PRK08042 382 SFFKLSN 388
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-387 |
6.83e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.49 E-value: 6.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 262 IILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 75047769 342 MVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFS 387
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQ 395
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
119-408 |
7.81e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 47.72 E-value: 7.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 119 YILFETTLIPTLIIIARWGNQTERLNAGL-YFLFYTLLGSLPLL-VALIFTQAQMGSLHILLLTLTPNPLLNSWSNDILW 196
Cdd:MTH00196 19 YLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVLNSGQSFSSVSVPIGY 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 197 LACMMAFLVKMPLYGFHLWLPKAHVEAPIAgSMVLAAILLKLGGYGILRIIIILEPIsklmaypFIILATWGMIMTSSIC 276
Cdd:MTH00196 99 LLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLGIFSILVSIGLNVNI-------LLIGGLFSLFVGAIGA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 277 LRQTDLKSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLA---NTNYErahsrTMVLIRGLQMVLP 353
Cdd:MTH00196 171 LNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVYKN-----LIIEFSGLSRRLP 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 75047769 354 LMSSWWLLASLANLGLPPTINLISELMIIVSAFSW-SNLTLILLGLNTVITAIYSL 408
Cdd:MTH00196 246 ILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYqYYLIFLLAVFCSVIAGVYYV 301
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
155-408 |
4.38e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.84 E-value: 4.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 155 LGSLPLLVALIFTQAQMGSLHILLLTLTPNPllnSWSNDILWLACMMAFLV--KMPLYGFHLWLPKAhVEAPIAGS-MVL 231
Cdd:MTH00020 173 VGDIGLLLAMFLLWDRFGSLDFSSVFNMVVS---APSSDITLICLFLFIGAvgKSAQLGLHTWLPDA-MEGPTPVSaLIH 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 232 AAILLKLGGYGILRIIIILEpISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMG-LVVAASLIQTPWGFM 310
Cdd:MTH00020 249 AATMVTAGVFLLIRSSPLFE-QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGyMVVACGLSHYSISLF 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 311 gataMMIAHGLTSTMLFRLANTN-YERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWS 389
Cdd:MTH00020 328 ----HLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQY 403
|
250 260
....*....|....*....|.
gi 75047769 390 NLTLI--LLGLNTVITAIYSL 408
Cdd:MTH00020 404 YLIFAywLGCFSALLTAFYSI 424
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
48-299 |
1.81e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 44.15 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 48 LGLNFNLnfFTDPLSSPLLVLSCWLLPLMILASQFHLMNESTTHKRMYLILLVSLQVALLMAFSAvEFMMYYILFETTLI 127
Cdd:PRK12645 68 LGINFTL--YVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGNFYVYLLLFMGAMLGVVLSD-NLIVLYLFWELTSI 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 128 PTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGSLHILLLTLTPNPllnsWSNDILWLACMMAFLV-- 205
Cdd:PRK12645 145 SSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADE----IQNSPLFIPAMILILLga 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 206 --KMPLYGFHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGILRiiiiLEPISKLMAYPFIILATWGMIM---TSSICLRQ 279
Cdd:PRK12645 221 ftKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVAR----FTPIFAGSQVWFWTVTLVGLITlfwGSLNAVKQ 295
|
250 260
....*....|....*....|
gi 75047769 280 TDLKSLIAYSSVSHMGLVVA 299
Cdd:PRK12645 296 TDLKGILAFSTVSQLGLIMS 315
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
192-414 |
5.78e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.44 E-value: 5.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 192 NDILWLACMMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPIsKLMAYPFIILATWGMIM 271
Cdd:MTH00207 178 NNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSST-YWFNPALLLTASLTMLM 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 272 TSSICLRQTDLKSLIAYSSVSHMGLVVAASLIQTPwgfMGATAMMIAHGLTSTMLFRLANTN-YERAHSRTMVLIRGLQM 350
Cdd:MTH00207 257 AGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMP---KLALFHLITHALFKALLFVCAGSLiHSHHHSQDLRTMGNLTN 333
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 75047769 351 VLPLMSSWWLLASLANLGLPPTINLISELMIIVSA-FSWSNLTLILL-GLNTVITAIYSLYMLTSV 414
Cdd:MTH00207 334 QMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSlFYPHNSLMILMiFLATALTAAYSTRFTLAV 399
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
200-398 |
8.95e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.41 E-value: 8.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 200 MMAFLVKMPLYGFHLWLPKAHVEAPIAGSMVLAAILlKLggYGILRIIIILEpiSKLMAYPFIILATWGMIMTSSICLRQ 279
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KV--APLFLLSNFLD--LYWLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 280 TDLKSLIAYSSVSHMGLVVAASLIqTPWGFMGATAMMIAHGLTSTMLFRLANTNYerahsrTMVLIRGLQMVLPLMSSWW 359
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILH-GSWLMWMYFLIYIVSSGFLFFSLWSGDSGS------MKDLGSLKPSYKTGLSIIS 238
|
170 180 190
....*....|....*....|....*....|....*....
gi 75047769 360 LLASLAnlGLPPTINLISELMIIVSAFSWSNLTLILLGL 398
Cdd:MTH00144 239 LLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLL 275
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
211-391 |
2.27e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 40.33 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 211 GFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILE--PISKLMAYPFIILATWgmiMTSSICLRQTDLKSLIAY 288
Cdd:MTH00032 243 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEkaPLTLLIITIFGALTAF---FAATVGLVQNDLKKVIAY 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 289 SSVSHMGLVVAASLIQTPWGFmgATAMMIAHGLTSTMLFRLA-----NTNYERAHSRTMvliRGLQMVLPLMSSWWLLAS 363
Cdd:MTH00032 320 STCSQLGYMVLIIGIEGSHNV--GLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTYTMMLIGS 394
|
170 180
....*....|....*....|....*...
gi 75047769 364 LANLGLPPTINLISELMIIVSAFSWSNL 391
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLILELTYSGRNM 422
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
94-414 |
4.18e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.55 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 94 MYLILLVslqVALLMAFSAVEFMMYYILFETTLIPTLIIIARWGNQTERLNAGLYFLFYTLLGSLPLLVALIFTQAQMGS 173
Cdd:MTH00211 114 KYLLLFL---IFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 174 LHILLLTLTpnpllnSWSNDILWLACMMAFLVKMPLYGFHLWLPKAhVEAPIAGS-------MVLAAILLKLGGYGILri 246
Cdd:MTH00211 191 WEISQLFIL------NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFLLIRLSPLF-- 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 247 iiilePISKLMAYPFIILATWGMIMTSSICLRQTDLKSLIAYSSVSHMGL-VVAASLIQTPWGFMgataMMIAHGLTSTM 325
Cdd:MTH00211 262 -----QNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLmMVTLGLNQPQLAFL----HICTHAFFKAM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 326 LFRLA-----NTNYERaHSRTMvliRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAF-SWSNLTLILLGL- 398
Cdd:MTH00211 333 LFMCSgsiihGLNNEQ-DIRKM---GGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNgSYLNAWALLLTLl 408
|
330
....*....|....*.
gi 75047769 399 NTVITAIYSLYMLTSV 414
Cdd:MTH00211 409 ATSLTAAYSFRLIFLS 424
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
212-410 |
6.53e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.86 E-value: 6.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 212 FHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYPFIIlATWGMIMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00209 194 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLL-GSLTTLMASMSANVESDLKKIIALSTL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75047769 292 SHMGLVVAA-SLIQTPWGFMgataMMIAHGLTSTMLFRLA-NTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGL 369
Cdd:MTH00209 273 SQLGLMMCSlGLNQPELAFF----HLITHALFKALLFICAgNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGI 348
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 75047769 370 PPTINLISELMIIVSAF--SWSNLTLILLGLNTVITAIYSLYM 410
Cdd:MTH00209 349 PFLAGFYSKDLILESMLesNMPIMTLILMFLSTSLTAAYSMRL 391
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