AAA family ATPase [Bacteroides fragilis]
Protein Classification
ATP-binding protein( domain architecture ID 10561305)
ATP-binding protein with an AAA (ATPases Associated with various cellular Activities) domain and a C-terminal PD-(D/E)XK nuclease domain, which found in restriction endonuclease-like proteins that are involved in numerous nucleic acid cleavage events important for various cellular processes
List of domain hits
| Name | Accession | Description | Interval | E-value | |||||
| AAA-ATPase_like | pfam09820 | Predicted AAA-ATPase; This family contains many hypothetical bacterial proteins. This family ... |
6-282 | 1.71e-144 | |||||
Predicted AAA-ATPase; This family contains many hypothetical bacterial proteins. This family was previously the N-terminal part of the Pfam DUF1703 (pfam08011) family before it was split into two. This region is predicted to be an AAA-ATPase domain. : Pssm-ID: 430851 Cd Length: 278 Bit Score: 416.16 E-value: 1.71e-144
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| PDDEXK_9 | pfam08011 | PD-(D/E)XK nuclease superfamily; This family contains many hypothetical bacterial proteins. It ... |
422-512 | 4.45e-25 | |||||
PD-(D/E)XK nuclease superfamily; This family contains many hypothetical bacterial proteins. It has been identified as a member of the PD-(D/E)XK nuclease superfamily through transitive meta profile searches. DUF1703 has the predicted secondary structure pattern of the restriction endonuclease-like fold core and contains an additional beta-strand at the C-terminus. : Pssm-ID: 400391 Cd Length: 104 Bit Score: 99.25 E-value: 4.45e-25
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| Name | Accession | Description | Interval | E-value | |||||
| AAA-ATPase_like | pfam09820 | Predicted AAA-ATPase; This family contains many hypothetical bacterial proteins. This family ... |
6-282 | 1.71e-144 | |||||
Predicted AAA-ATPase; This family contains many hypothetical bacterial proteins. This family was previously the N-terminal part of the Pfam DUF1703 (pfam08011) family before it was split into two. This region is predicted to be an AAA-ATPase domain. Pssm-ID: 430851 Cd Length: 278 Bit Score: 416.16 E-value: 1.71e-144
|
|||||||||
| PDDEXK_9 | pfam08011 | PD-(D/E)XK nuclease superfamily; This family contains many hypothetical bacterial proteins. It ... |
422-512 | 4.45e-25 | |||||
PD-(D/E)XK nuclease superfamily; This family contains many hypothetical bacterial proteins. It has been identified as a member of the PD-(D/E)XK nuclease superfamily through transitive meta profile searches. DUF1703 has the predicted secondary structure pattern of the restriction endonuclease-like fold core and contains an additional beta-strand at the C-terminus. Pssm-ID: 400391 Cd Length: 104 Bit Score: 99.25 E-value: 4.45e-25
|
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| Name | Accession | Description | Interval | E-value | |||||
| AAA-ATPase_like | pfam09820 | Predicted AAA-ATPase; This family contains many hypothetical bacterial proteins. This family ... |
6-282 | 1.71e-144 | |||||
Predicted AAA-ATPase; This family contains many hypothetical bacterial proteins. This family was previously the N-terminal part of the Pfam DUF1703 (pfam08011) family before it was split into two. This region is predicted to be an AAA-ATPase domain. Pssm-ID: 430851 Cd Length: 278 Bit Score: 416.16 E-value: 1.71e-144
|
|||||||||
| PDDEXK_9 | pfam08011 | PD-(D/E)XK nuclease superfamily; This family contains many hypothetical bacterial proteins. It ... |
422-512 | 4.45e-25 | |||||
PD-(D/E)XK nuclease superfamily; This family contains many hypothetical bacterial proteins. It has been identified as a member of the PD-(D/E)XK nuclease superfamily through transitive meta profile searches. DUF1703 has the predicted secondary structure pattern of the restriction endonuclease-like fold core and contains an additional beta-strand at the C-terminus. Pssm-ID: 400391 Cd Length: 104 Bit Score: 99.25 E-value: 4.45e-25
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| Blast search parameters | ||||
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