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Conserved domains on  [gi|446388887|ref|WP_000466742|]
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MULTISPECIES: GlsB/YeaQ/YmgE family stress response membrane protein [Staphylococcus]

Protein Classification

GlsB/YeaQ/YmgE family stress response membrane protein( domain architecture ID 10006287)

GlsB/YeaQ/YmgE family stress response membrane protein similar to Bacillus subtilis UPF0410 proteins YwzA and YdaS

Gene Ontology:  GO:0016020

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YeaQ COG2261
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family ...
 3-82 1.70e-11

Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family [General function prediction only];


:

Pssm-ID: 441862  Cd Length: 85  Bit Score: 54.28  E-value: 1.70e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446388887  3 GFIGMLIVGGLIGWAAGAIMGKDIPGGILGNIIAGIIGSWLGGTLLGHWGPELGS----IYILPALIGSIILIALVTLIL 78
Cdd:COG2261   2 GIIGWIIIGLIAGWLARAIMPGGQGGGLIGTIVLGIVGAFVGGWLGGLLGIGLVGgfslGSLIVAVIGAIILLFIYRLIR 81


                ....
gi 446388887 79 RAVR 82
Cdd:COG2261  82 GRRR 85
 
Name Accession Description Interval E-value
YeaQ COG2261
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family ...
 3-82 1.70e-11

Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family [General function prediction only];


Pssm-ID: 441862  Cd Length: 85  Bit Score: 54.28  E-value: 1.70e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446388887  3 GFIGMLIVGGLIGWAAGAIMGKDIPGGILGNIIAGIIGSWLGGTLLGHWGPELGS----IYILPALIGSIILIALVTLIL 78
Cdd:COG2261   2 GIIGWIIIGLIAGWLARAIMPGGQGGGLIGTIVLGIVGAFVGGWLGGLLGIGLVGgfslGSLIVAVIGAIILLFIYRLIR 81


                ....
gi 446388887 79 RAVR 82
Cdd:COG2261  82 GRRR 85
 
Name Accession Description Interval E-value
YeaQ COG2261
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family ...
 3-82 1.70e-11

Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family [General function prediction only];


Pssm-ID: 441862  Cd Length: 85  Bit Score: 54.28  E-value: 1.70e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446388887  3 GFIGMLIVGGLIGWAAGAIMGKDIPGGILGNIIAGIIGSWLGGTLLGHWGPELGS----IYILPALIGSIILIALVTLIL 78
Cdd:COG2261   2 GIIGWIIIGLIAGWLARAIMPGGQGGGLIGTIVLGIVGAFVGGWLGGLLGIGLVGgfslGSLIVAVIGAIILLFIYRLIR 81


                ....
gi 446388887 79 RAVR 82
Cdd:COG2261  82 GRRR 85
TlyC COG1253
Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction ...
 31-78 3.60e-03

Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction only];


Pssm-ID: 440865 [Multi-domain]  Cd Length: 435  Bit Score: 34.32  E-value: 3.60e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446388887  31 LGNIIAGIIGSWLGGTLLGHW-GPELGSIYILP------ALIGSIILIALVTLIL 78
Cdd:COG1253   65 IGITLAGLLAGALGEAALAALlAPLLGSLGLPAalahtlALVLAVVLITFLSLVF 119
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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