NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|446982859|ref|WP_001060115|]
View 

MULTISPECIES: APC family permease [Bacillus]

Protein Classification

APC family permease( domain architecture ID 11425014)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0016020|GO:0055085|GO:0022857|GO:0015171|GO:0006865
PubMed:  23177982|24038584|25043943|10931886
SCOP:  4006243
TCDB:  2.A.3.1|2.A.3

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-413 1.71e-61

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


:

Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 205.52  E-value: 1.71e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   4 KAIGLFQGIALYISAILGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLG 83
Cdd:COG0531   11 RKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLG 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  84 NIVGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHfeTIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASAVFV 163
Cdd:COG0531   91 FLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGG--SVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIVV 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 164 AFPRIQWGNFTPFVPN--GWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALSLVTIGTA 241
Cdd:COG0531  169 GLFAFDPANFTPFLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVV 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 242 TYGSQESNLSPIGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFSRLHATTQIPRQMVLF 321
Cdd:COG0531  249 PYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILL 328

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 322 VICFSVAGVLVTKAlslTFDDILFIPTSLGILVYVLSMAAGVKLFRKN--------TLAWWASLISFILCLLVIPFFQLY 393
Cdd:COG0531  329 TGVIALLLLLLGAA---SFTALASLASVGVLLAYLLVALAVIVLRRRRpdlprpfrVPLPLIPILGILLCLFLLYLLGPG 405

                        410       420
                 ....*....|....*....|..
gi 446982859 394 IFVPLIVVAI--YVIYMILSNK 413
Cdd:COG0531  406 ALLIGLVLLAigLLLYLLYRRR 427
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-413 1.71e-61

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 205.52  E-value: 1.71e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   4 KAIGLFQGIALYISAILGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLG 83
Cdd:COG0531   11 RKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLG 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  84 NIVGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHfeTIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASAVFV 163
Cdd:COG0531   91 FLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGG--SVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIVV 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 164 AFPRIQWGNFTPFVPN--GWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALSLVTIGTA 241
Cdd:COG0531  169 GLFAFDPANFTPFLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVV 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 242 TYGSQESNLSPIGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFSRLHATTQIPRQMVLF 321
Cdd:COG0531  249 PYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILL 328

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 322 VICFSVAGVLVTKAlslTFDDILFIPTSLGILVYVLSMAAGVKLFRKN--------TLAWWASLISFILCLLVIPFFQLY 393
Cdd:COG0531  329 TGVIALLLLLLGAA---SFTALASLASVGVLLAYLLVALAVIVLRRRRpdlprpfrVPLPLIPILGILLCLFLLYLLGPG 405

                        410       420
                 ....*....|....*....|..
gi 446982859 394 IFVPLIVVAI--YVIYMILSNK 413
Cdd:COG0531  406 ALLIGLVLLAigLLLYLLYRRR 427
PRK11021 PRK11021
putative transporter; Provisional
 6-386 8.21e-45

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 160.46  E-value: 8.21e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   6 IGLFQGIALYISAILGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGNI 85
Cdd:PRK11021   1 LGLWQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  86 VGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHFETIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASAVFVAf 165
Cdd:PRK11021  81 TGWLFLSVIPVGLPAALQIAAGFGQALFGWSSWQLLLAELLTLALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAG- 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 166 pRIQWGNFTPFVPN--GWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALSLVTIGTATY 243
Cdd:PRK11021 160 -DIKPADIPFPAPGsiEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAY 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 244 GSQESNLSPIGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFSRLHAtTQIPRQMVLFVI 323
Cdd:PRK11021 239 GDKQAAAASLPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSA-RGVPVNALNAVL 317

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446982859 324 CFSVAGVLVTKALSLTFDDILFIPTSLGILVYVLSMAAGVKLFRKntLAWWASLISFILCLLV 386
Cdd:PRK11021 318 GCCAVSILLIYALGLNLEALIAYANGIFVLIYLLCMLAACKLLKG--RYRPLAVLGCLLCLLL 378
AA_permease_2 pfam13520
Amino acid permease;
6-397 2.42e-20

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 92.37  E-value: 2.42e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859    6 IGLFQGIALYISAILGSGVLFLSGVTAsiAGPASIVSWFI-VIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGN 84
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVAS--GGPALIVWGWIaAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   85 IVGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHFE----TIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASA 160
Cdd:pfam13520  79 LAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPttwlTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLIL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  161 VFVA--------FPRIQWGNFTPFVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRpeKDIVKGAVISAVVIGLLFLA 232
Cdd:pfam13520 159 IIILglvtadggGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYIL 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  233 LSLVTIGTATYG--SQESNLSPIGVIMGGTVGGG-AKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFP--KFFSR 307
Cdd:pfam13520 237 VNIAFFGVVPDDeiALSSGLGQVAALLFQAVGGKwGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAK 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  308 LHATTQIPRQMVLFVICFSVAGVLVTkALSLTFDDILFIPTSLGILVYVLSMAAGVKLFRKN---TLAWWASLISFILCL 384
Cdd:pfam13520 317 VNKFGSPIRAIILTAILSLILLLLFL-LSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRpdlGRIPGRWPVAIFGIL 395

                         410
                  ....*....|...
gi 446982859  385 LVIPFFQLYIFVP 397
Cdd:pfam13520 396 FSLFLIVALFFPP 408
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 4-361 1.07e-12

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 69.39  E-value: 1.07e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859    4 KAIGLFQGIALYISAILGSGVLFLSGVTASIAGPA--SIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYH 81
Cdd:TIGR00911  42 KEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVglALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPL 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   82 LGNIVGWFYFVTAAVG-QTIVSLTGAFYVSQAFGFSHFETII----IAVFILVIAGVSNYYGVNVSGKVAVILSSLLLIL 156
Cdd:TIGR00911 122 LAFLRLWIELLVIRPGsQAVNALNFAIYILTPVFPDCEVPEWairlVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLA 201

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  157 LASAVFVAFPRIQWGNFTPFVPNGWFS--------VGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGL 228
Cdd:TIGR00911 202 LLLIIITGWVQLGKGGVESLNPKNAFEgtetsaggIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTF 281

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  229 LFLalsLVTIGTATYGSQESNLSP--IGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFS 306
Cdd:TIGR00911 282 IYV---LTNIAYFTVLSPEELLASlaVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLS 358

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 446982859  307 RLHATTQIPRQMVLFVICFSVagvlvtkaLSLTFDDILFIPTSLGILVYVLSMAA 361
Cdd:TIGR00911 359 MIHVKRLTPLPSLLIVCTLTL--------LMLFSGDIYSLINLISFANWLFNALA 405
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-413 1.71e-61

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 205.52  E-value: 1.71e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   4 KAIGLFQGIALYISAILGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLG 83
Cdd:COG0531   11 RKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLG 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  84 NIVGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHfeTIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASAVFV 163
Cdd:COG0531   91 FLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGG--SVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIVV 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 164 AFPRIQWGNFTPFVPN--GWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALSLVTIGTA 241
Cdd:COG0531  169 GLFAFDPANFTPFLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVV 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 242 TYGSQESNLSPIGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFSRLHATTQIPRQMVLF 321
Cdd:COG0531  249 PYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILL 328

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 322 VICFSVAGVLVTKAlslTFDDILFIPTSLGILVYVLSMAAGVKLFRKN--------TLAWWASLISFILCLLVIPFFQLY 393
Cdd:COG0531  329 TGVIALLLLLLGAA---SFTALASLASVGVLLAYLLVALAVIVLRRRRpdlprpfrVPLPLIPILGILLCLFLLYLLGPG 405

                        410       420
                 ....*....|....*....|..
gi 446982859 394 IFVPLIVVAI--YVIYMILSNK 413
Cdd:COG0531  406 ALLIGLVLLAigLLLYLLYRRR 427
PRK11021 PRK11021
putative transporter; Provisional
 6-386 8.21e-45

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 160.46  E-value: 8.21e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   6 IGLFQGIALYISAILGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGNI 85
Cdd:PRK11021   1 LGLWQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  86 VGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHFETIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASAVFVAf 165
Cdd:PRK11021  81 TGWLFLSVIPVGLPAALQIAAGFGQALFGWSSWQLLLAELLTLALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAG- 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 166 pRIQWGNFTPFVPN--GWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALSLVTIGTATY 243
Cdd:PRK11021 160 -DIKPADIPFPAPGsiEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAY 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 244 GSQESNLSPIGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFSRLHAtTQIPRQMVLFVI 323
Cdd:PRK11021 239 GDKQAAAASLPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSA-RGVPVNALNAVL 317

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446982859 324 CFSVAGVLVTKALSLTFDDILFIPTSLGILVYVLSMAAGVKLFRKntLAWWASLISFILCLLV 386
Cdd:PRK11021 318 GCCAVSILLIYALGLNLEALIAYANGIFVLIYLLCMLAACKLLKG--RYRPLAVLGCLLCLLL 378
AA_permease_2 pfam13520
Amino acid permease;
6-397 2.42e-20

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 92.37  E-value: 2.42e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859    6 IGLFQGIALYISAILGSGVLFLSGVTAsiAGPASIVSWFI-VIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGN 84
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVAS--GGPALIVWGWIaAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   85 IVGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHFE----TIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASA 160
Cdd:pfam13520  79 LAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPttwlTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLIL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  161 VFVA--------FPRIQWGNFTPFVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRpeKDIVKGAVISAVVIGLLFLA 232
Cdd:pfam13520 159 IIILglvtadggGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYIL 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  233 LSLVTIGTATYG--SQESNLSPIGVIMGGTVGGG-AKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFP--KFFSR 307
Cdd:pfam13520 237 VNIAFFGVVPDDeiALSSGLGQVAALLFQAVGGKwGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAK 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  308 LHATTQIPRQMVLFVICFSVAGVLVTkALSLTFDDILFIPTSLGILVYVLSMAAGVKLFRKN---TLAWWASLISFILCL 384
Cdd:pfam13520 317 VNKFGSPIRAIILTAILSLILLLLFL-LSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRpdlGRIPGRWPVAIFGIL 395

                         410
                  ....*....|...
gi 446982859  385 LVIPFFQLYIFVP 397
Cdd:pfam13520 396 FSLFLIVALFFPP 408
AA_permease pfam00324
Amino acid permease;
16-410 1.32e-15

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 78.52  E-value: 1.32e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   16 ISAILGSGVLFLSGVTASIAGPAS-IVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGNIVGWFYFVTA 94
Cdd:pfam00324   7 LGGVIGTGLFVGSGSVLGQAGPAGaLLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWNYWLSW 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   95 AVGQTIVSLTGAFYVSQAFGFS--HFETIIIAVFILVIAGVsNYYGVNVSGK-------------VAVILSSLLLILLAS 159
Cdd:pfam00324  87 ITVLALELTAASILIQFWELVPdiPYLWVWGAVFLVLLTII-NLVGVKWYGEaefwfalikiiaiIGFIIVGIILLSGGN 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  160 AVFVAFPRIQWG-----NFTPFVPNGWFSVgnaITVIFWAFFGWEAICNLAEHFKRPEKDIVKgAVISAVVIGLLFLALS 234
Cdd:pfam00324 166 PNDGAIFRYLGDnggknNFPPGFGKGFISV---FVIAFFAFTGIELVGIAAGEVKNPEKSIPK-AILQVIWRITIFYILS 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  235 LVTIGTATYGSQESNLSPIGVIMGGTVGGGAKVVTAVLALII-------CTGTANAFVASLTQLGYSLSRDGAFPKFFSR 307
Cdd:pfam00324 242 LLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISGLAPLInaviltaALSAANSSLYSGSRMLYSLARDGLAPKFLKK 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  308 lHATTQIPRQMVLFVICFSVAGVLVTK-ALSLTFDDILFIPTSLGILVYVLSMAAGVKLFRK-NTLAWWASLISFILCLL 385
Cdd:pfam00324 322 -VDKRGVPLRAILVSMVISLLALLLASlNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAfKYQGRSIDELPFKAPLG 400

                         410       420
                  ....*....|....*....|....*
gi 446982859  386 ViPFFQLYIFVPLIVVAIYVIYMIL 410
Cdd:pfam00324 401 P-LGVILGLAAIIIILIIQFLYAFL 424
potE PRK10655
putrescine transporter; Provisional
 3-361 4.32e-14

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 73.53  E-value: 4.32e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   3 NKAIGLFQGIALYISAILGSGVLFLSGVTASIaGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHL 82
Cdd:PRK10655   5 SNKMGVVQLTILTAVNMMGSGIIMLPTKLAQV-GTISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFGKSG 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  83 GNIVGWFYFVTAAVGQTIVSLTGAFYVSQAFGF--SHFETIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASA 160
Cdd:PRK10655  84 NFMANYTYGVSLLIANVAIAISAVGYGTELFGAtlSPVQICLATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 161 VFVAFpriQWGNFTPFV----PNG---WFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDI---VKGAVISAVVIgllF 230
Cdd:PRK10655 164 SIIGW---FWFSPSLYVaawnPHHlpfFSAVGSSIAMTLWAFLGLESACANSDAVENPERNVpiaVLGGTLGAAVI---Y 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 231 LALSLVTIGTATYGSQESNLSPIG----VIMGGTVGggaKVVTAvLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFS 306
Cdd:PRK10655 238 IVSTNVIAGIVPNMELANSTAPFGlafaQMFNPTVG---KIVMA-LMVMSCCGSLLGWQFTIAQVFKSSADEGYFPKIFS 313

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446982859 307 RLHATTQIPRQMVLFVICFSVAGVL-VTKALSLTFDDILFIPTSLGILVYVLSMAA 361
Cdd:PRK10655 314 RVTKVDAPVQGMLIIVVIQSLLSLMtISPSLNSQFNVLVNLAVVTNIIPYILSMAA 369
frlA PRK11357
amino acid permease;
4-338 5.33e-14

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 73.35  E-value: 5.33e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   4 KAIGLFQGIALYISAILGSGVLFLSGVTASIAGPA--SIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYH 81
Cdd:PRK11357   8 RKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPwlTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  82 LGNIVGWFYF-VTAAVGQTIVSLTGAFYVSQAFGFSHFETIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASA 160
Cdd:PRK11357  88 LAFLSGWASFwANDAPSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 161 VFVAFPRIQWGNFTPFVPNGWFSVGN------AITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALS 234
Cdd:PRK11357 168 IGLGIFWFKAENFAAPTTTAIGATGSfmallaGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLA 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 235 LVTIGTATYGSQESNLSPIGVIMG--GTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFSRLHATT 312
Cdd:PRK11357 248 LVISGLMPFDKLANSETPISDALTwiPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKY 327

                        330       340
                 ....*....|....*....|....*.
gi 446982859 313 QIPRQMVLFVICFSVAGVLVTKALSL 338
Cdd:PRK11357 328 NTPDVSIILQGALGIFFIFVSDLTSL 353
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 4-361 1.07e-12

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 69.39  E-value: 1.07e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859    4 KAIGLFQGIALYISAILGSGVLFLSGVTASIAGPA--SIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYH 81
Cdd:TIGR00911  42 KEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVglALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPL 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   82 LGNIVGWFYFVTAAVG-QTIVSLTGAFYVSQAFGFSHFETII----IAVFILVIAGVSNYYGVNVSGKVAVILSSLLLIL 156
Cdd:TIGR00911 122 LAFLRLWIELLVIRPGsQAVNALNFAIYILTPVFPDCEVPEWairlVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLA 201

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  157 LASAVFVAFPRIQWGNFTPFVPNGWFS--------VGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGL 228
Cdd:TIGR00911 202 LLLIIITGWVQLGKGGVESLNPKNAFEgtetsaggIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTF 281

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  229 LFLalsLVTIGTATYGSQESNLSP--IGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFS 306
Cdd:TIGR00911 282 IYV---LTNIAYFTVLSPEELLASlaVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLS 358

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 446982859  307 RLHATTQIPRQMVLFVICFSVagvlvtkaLSLTFDDILFIPTSLGILVYVLSMAA 361
Cdd:TIGR00911 359 MIHVKRLTPLPSLLIVCTLTL--------LMLFSGDIYSLINLISFANWLFNALA 405
PRK10644 PRK10644
arginine/agmatine antiporter;
4-387 1.79e-12

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 68.66  E-value: 1.79e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   4 KAIGLFQGIALYISAILGSGVLFLSGVTASIAGpASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLG 83
Cdd:PRK10644   8 HKVGLIPVTLMVAGNIMGSGVFLLPANLASTGG-IAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLG 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  84 NIVGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHFETI--IIAVFILVIAGVSNYYGVNVSGKV-AVILSSLLLILLASA 160
Cdd:PRK10644  87 YQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVltITCVVVLWIFVLLNIVGPKMITRVqAVATVLALIPIVGIA 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 161 VFVAF---PRIQWGNFTPFVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALSLVT 237
Cdd:PRK10644 167 VFGWFwfrGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSSTAI 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 238 IGTATYGSQESNLSPIGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFSRLH-ATTQIPR 316
Cdd:PRK10644 247 MGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNkAGTPVAG 326

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446982859 317 QMVLFVICFSVAGVLVTKALSLTFDDILFIPTSLGILVYVLSMAA----GVKLFRKNTLAWWA-SLISFILCLLVI 387
Cdd:PRK10644 327 LLIVGVLMTIFQLSSISPNASKEFGLVSSVSVIFTLVPYLYTCAAllllGHGHFGKARPAYLAvTLIAFVYCIWAV 402
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 12-315 2.93e-11

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 65.22  E-value: 2.93e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   12 IALYISAILGSGVLFLSGVTA-SIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGNIVGWFY 90
Cdd:TIGR00906  36 MALGIGSTIGAGIYVLTGEVArNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELWAFITGWNL 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   91 FVTAAVGQTIV--SLTGAF--------------YVSQAFGFSHFETIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLL 154
Cdd:TIGR00906 116 ILEYVIGTAAVarSWSAYFdellnkqigqfrrtYFKLNYDGLAEYPDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINI 195

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  155 ILLASAVFVAFPRIQWGNFTP--------FVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVI 226
Cdd:TIGR00906 196 LVLLFVIIAGFTKADVANWSIteekgaggFMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVC 275

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  227 GLLFLALSLVTIGTATYGSQESNlSPIGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFS 306
Cdd:TIGR00906 276 FVAYFLMSAALTLMMPYYLLDPD-APFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLA 354


                  ....*....
gi 446982859  307 RLHATTQIP 315
Cdd:TIGR00906 355 QINSKTKTP 363
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
25-413 9.24e-10

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 60.13  E-value: 9.24e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  25 LFL-SGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGNIVGWFYFVTAAVGqTIVSL 103
Cdd:COG1113   35 LFLgSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYLGPWAGFVTGWLYWFFWVLV-GMAEA 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 104 T-GAFYVSqaFGFSHFETIIIAVFILVIAGVSNYYGVNVSG---------KVA---VILSSLLLILLASAVFVAFPRIQW 170
Cdd:COG1113  114 TaVGIYLQ--FWFPDVPQWVWALVFLVLLTAINLLSVKLFGefefwfaliKVVaivAFIVVGLLLIFFGFGLPGGPPAGL 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 171 GNFT---PFVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKgAVISAVVIGLLFLALSLVTIGTAT-YGSQ 246
Cdd:COG1113  192 SNLWdhgGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPK-AINSVIWRILLFYVGSLFVILALVpWNQI 270

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 247 ESNLSPIGVIMGGTVGGGAK------VVTAVLAliictgTANAFVASLTQLGYSLSRDGAFPKFFSRLHAtTQIPRQMVL 320
Cdd:COG1113  271 GAGGSPFVTVFSLLGIPAAAgimnfvVLTAALS------SLNSGLYSTSRMLYSLAERGDAPKFFGKLSK-RGVPVRAIL 343

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 321 FVICFSVAGVLVTKAL-SLTFDDILFIPTSLGILVYVLSMAAGVKLFRKNTLAW---------------WASLISFILCL 384
Cdd:COG1113  344 LSAVVLLIGVVLNYLLpEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGaaalkfkmpgfpytsYLTLAFLAAVL 423

                        410       420       430
                 ....*....|....*....|....*....|...
gi 446982859 385 LVIPFFQLY----IFVPLIVVAIYVIYMILSNK 413
Cdd:COG1113  424 VLMAFDPDTrialIVGPVWLALLVVGYFLVRRR 456
PRK15049 PRK15049
L-asparagine permease;
3-353 3.45e-08

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 55.40  E-value: 3.45e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   3 NKAIGLFQGIALYISAILGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHL 82
Cdd:PRK15049  27 HKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKA 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  83 GNIVGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHFETIIIAVFILVIAGVSNYYGVNVSGKVA-----VILSSLLLILL 157
Cdd:PRK15049 107 AYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEfwfalIKVLAIVTFLV 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 158 ASAVFVAFPRIQWGNFT---------PFVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGL 228
Cdd:PRK15049 187 VGTVFLGSGQPLDGNTTgfhlitdngGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGL 266

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 229 LFLALSLVTIGTATYGSQESNLSPIGVIMGGTvggGAKVVTAVLALIICTGTANAFVASLTQLG---YSLSRDGAFPKFF 305
Cdd:PRK15049 267 FYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKL---GVPYIGSIMNIVVLTAALSSLNSGLYCTGrilRSMAMGGSAPSFM 343

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 446982859 306 SRLhATTQIPRQMVLFVICFSVAGVLVTKALSLTFDDILFIPTSLGIL 353
Cdd:PRK15049 344 AKM-SRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGII 390
cadB PRK10435
cadaverine/lysine antiporter;
1-305 4.62e-08

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 54.76  E-value: 4.62e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   1 MNNKAIGLFQGIALYISAILGSGVLFLSGVTASIaGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATF---VRNS 77
Cdd:PRK10435   2 SSAKKIGLFACTGVVAGNMMGSGIALLPANLASI-GSIAIWGWIISIIGAMSLAYVYARLATKNPQQGGPIAYageISPA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  78 FGYHlgniVGWFYFVTAAVGQTIVSLTGAFYVSQAFGFSHFEtiiIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILL 157
Cdd:PRK10435  81 FGFQ----TGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDP---IPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVL 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 158 ASAVFVAFPRIQWGNFTPFVPN-GW--------FSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGL 228
Cdd:PRK10435 154 VLIPVVGTAIVGWHWFDAATYAaNWntsdttdgHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGI 233

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446982859 229 LFLALSLVTIGTATYGSQESNLSPIGVIMGGTVGGGAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFF 305
Cdd:PRK10435 234 IYIAATQVISGMFPASVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVY 310
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 36-369 3.07e-07

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 52.44  E-value: 3.07e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   36 GPASIV-SWFIVIIISFPLAYSFASLARIYPDSGG----AATFVRNSFGYHLGNIVGWF-----YFVTAAVG----QTIV 101
Cdd:TIGR00907  45 GAMSIVwGWIIAGAGSICIALSLAELSSAYPTSGGqyfwSAKLAPPRQMPFASWMTGWFnlagqVAGTASTDlsvaQLIL 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  102 SLTGAFYVSQAFGFSHFETIIIAVFILVIAGVSNYYGVN----VSGKVAVILSSLLLILLASAVFVAFPRIQWGN--FTP 175
Cdd:TIGR00907 125 GIVSLTTPGREYIPTRWHIFGIMIGIHLIHALINSLPTKwlprITSSAAYWSLLGFLTICITLLACKSPKFNDGKfvFTN 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  176 FVPN--GWFSVGNAITVIF----WAFFGWEAICNLAEHFKRPEKDI---VKGAVISAVVIGLLFLALSLVTIGTATYGSQ 246
Cdd:TIGR00907 205 FNNStgGWKPGGFAFLLGLlnpaWSMTGYDGTAHMAEEIENPEVVGpraIIGAVAIGIVTGFCFNIVLFFSMGDIDSLIS 284

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  247 ESNLSPIGVIMGGTVGGGA-KVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFP--KFFSRLHATTQIPRQMVLFVI 323
Cdd:TIGR00907 285 STTGQPIAQIFYNALGNKAgAIFLLCLILVTSFFCAITCMTANSRMIYAFSRDGGLPfsPLWSRVNPRTQVPLNAVWLSA 364

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 446982859  324 CFSVAGVLVTKALSLTFDDILFIPTSLGILVYVLSMAAGVKLFRKN 369
Cdd:TIGR00907 365 VWIILIGLLGLGSSTAFQAIFSVCTVALDVSYVIPIICKLAKGRNT 410
PRK10249 PRK10249
phenylalanine transporter; Provisional
 20-308 2.01e-06

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 49.98  E-value: 2.01e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  20 LGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGNIVGWFYFVT-AAVGQ 98
Cdd:PRK10249  37 IGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMfVLVGM 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  99 TIVSLTGAFyvsQAFGFSHFETIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASAVFVAFPRIQWGN------ 172
Cdd:PRK10249 117 AELTAAGIY---MQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHggekas 193

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 173 ------FTPFVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALSLVTIGTATYGSQ 246
Cdd:PRK10249 194 idnlwrYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEV 273

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446982859 247 ESNLSPIGVIMGGTvggGAKVVTAVLALIICTGTA---NAFVASLTQLGYSLSRDGAFPKFFSRL 308
Cdd:PRK10249 274 KSNSSPFVMIFHNL---DSNVVASALNFVILVASLsvyNSGVYSNSRMLFGLSVQGNAPKFLTRV 335
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
19-407 5.70e-06

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 48.24  E-value: 5.70e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  19 ILGSGVLFLSGVTASIAGP-ASIVSWFIVIIISFPLAYSFASLARIYPDSGG----AATFVRNSFGYhlgnIVGWFYFVT 93
Cdd:COG0833   27 VIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSfqtyATRFIDPAFGF----AVGWNYWLN 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  94 AAVgqTI-VSLTGAFYVSQAFgFSHFETIIIAVFILVIAGVSNYYGVNVSG---------KVAVILSSLLLILLASAVFV 163
Cdd:COG0833  103 WAI--TVaAELTAAGIIMQYW-FPDVPVWIWSLLFLALIFLLNALSVKAFGesefwfsliKVITVIAFIIVGLLMIFGII 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 164 AFPRIQWGNFT----PFvPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKgaVISAVVIG-LLFLALSLVTI 238
Cdd:COG0833  180 GGHAPGFSNFTtgdgPF-PGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPK--AIRQVFWRiLLFYILAIFVI 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 239 GtATYGSQESNL--SP-------IGVIMGGTVGGgAKVVTAVLAliictgTANAFVASLTQLGYSLSRDGAFPKFFSRLh 309
Cdd:COG0833  257 A-ALIPYTDAGVaeSPftlvferAGIPYAADIMN-AVILTAVLS------AGNSGLYASTRMLWSLAKEGMAPKIFAKL- 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 310 ATTQIPRQMVLFVICFSVAGVLvtkaLSLTFDDILFI----PTSLGILVYVLSMAAGVKLFRKNTLAW------------ 373
Cdd:COG0833  328 NKRGVPLNALLATMAVGLLALL----SSFFGAGTVYLwllsISGLTGFIAWLGIAISHYRFRRAYVAQggdledlkykap 403

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 446982859 374 ---WASLISFILCLLVI--------PFFQLYIFVPLIvVAIYVIY 407
Cdd:COG0833  404 lfpFGPIFAFILCLIVIigqafdpeQRIALYIGIPFF-LACYLGY 447
Spore_permease pfam03845
Spore germination protein;
9-240 8.50e-04

Spore germination protein;


Pssm-ID: 281794  Cd Length: 321  Bit Score: 41.08  E-value: 8.50e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859    9 FQGIALYISAILGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDsGGAATFVRNSFGYHLGNIVGw 88
Cdd:pfam03845   5 KQTFFLIVSFQLGSGILTLPRSVAEQAGPDGWISVLLAGIIGLILVYLYYYLLKKFPE-KTLIEYMKKILGKWLGSLLS- 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   89 FYFVTAAVGQTIVSLTGAFYVSQAFGFSHFETIIIAVFILVIAGVSNYYGVNVSGKVAVILSSLLLILLASAVFVAFPRI 168
Cdd:pfam03845  83 ILFMLYFLYIAGRVLRIFSEVIQFFLLPDTPTWIIILTLLLVSLYLISKGIEVLAREFCFIIPILLIILLLILLFSLKIA 162

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446982859  169 QWGNFTPFVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRPeKDIVKGAVISAVVIGLLFLALSLVTIGT 240
Cdd:pfam03845 163 HIDNLRPVLGNGISPVLKGLKVTSLPFGGFEILLMLYPFMKDK-KKSKKAALLGVGISGLLYTLTTIIVIGV 233
PRK10197 PRK10197
GABA permease;
14-309 1.08e-03

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 41.15  E-value: 1.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  14 LYISAILGSGVLFLSGVTASIAGPASIVSWFIVIIISFPLAYSFASLARIYPDSGGAATFVRNSFGYHLGNIVGWFYFVT 93
Cdd:PRK10197   2 LSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  94 AAVGQTIVSLTGAFYVSqafgfSHFETIIIAVFILVIA-GVSNYYGVNVSGKVAVILSSLLLILLASAVFVAFPRIQWGN 172
Cdd:PRK10197  82 WVLVIPLEANIAAMILH-----SWVPGIPIWLFSLVITlALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISG 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 173 FTP---------------FVPNGWFSVGNAITVIFWAFFGWEAICNLAEHFKRPEKDIVKGAVISAVVIGLLFLALSLVT 237
Cdd:PRK10197 157 FYPyaevsgisrlwdsggFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVV 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 238 I--------GTATYGSQESNLSPIGVIMggtvgggAKVVTAVLALIICTGTANAFVASLTQLGYSLSRDGAFPKFFSRLH 309
Cdd:PRK10197 237 ValipwnmpGLKAVGSYRSVLELLNIPH-------AKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKIN 309
PRK10836 PRK10836
lysine transporter; Provisional
 16-308 1.36e-03

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 40.96  E-value: 1.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  16 ISAILGSGVLFLSGVTASIAGP-ASIVSWFIVIIISFPLAYSFASLARIYPDSGGAAT----FVRNSFGYHLGNIVGWFY 90
Cdd:PRK10836  27 IGGSIGTGLFVASGATISQAGPgGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATygqnYVEEGFGFALGWNYWYNW 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  91 FVTAAVGQTIVSLTGAFYVSQAFGFSHFETIIIAVFILVIAGVSNY----YGVNVSGKVAVILSSLLLILLASAVFVAFP 166
Cdd:PRK10836 107 AVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFgeaeYWFSLIKVTTVIVFIIVGVLMIIGIFKGAE 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859 167 RIQWGNFT----PFVpnGWFS--VGNAITVIFwAFFGWEAICNLAEHFKRPEKDIVKgAVISAVVIGLLFLALSLVTIGT 240
Cdd:PRK10836 187 PAGWSNWTigdaPFA--GGFAamIGVAMIVGF-SFQGTELIGIAAGESEDPAKNIPR-AVRQVFWRILLFYVFAILIISL 262

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446982859 241 ATYGSQESNL---------SPIGVIM--GGTVGGGAKVVTAVLALIICTGTANAFVAslTQLGYSLSRDGAFPKFFSRL 308
Cdd:PRK10836 263 IIPYTDPSLLrndvkdisvSPFTLVFqhAGLLSAAAVMNAVILTAVLSAGNSGMYAS--TRMLYTLACDGKAPRIFAKL 339
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 16-307 2.57e-03

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 39.96  E-value: 2.57e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   16 ISAILGSGVLFLSGVTASIAGPAS-IVSWFIVIIISFPLAYSFASLARIYPDSGGAAT-----FVRNSFGYHLGNIVGWF 89
Cdd:TIGR00913  14 LGGTIGTGLLVGSGTALATGGPAGlLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFAtyasrFVDPAFGFAVGWNYWLQ 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859   90 YFVTAAVGQTIVSLTGAFYVSQAFgfshfETIIIAVFILVIAgVSNYYGVNVSGKVAVILSSLLLILLASAVFVAF---- 165
Cdd:TIGR00913  94 WLIVLPLELVTASMTIQYWTDKVN-----PAVWIAIFYVFIV-IINLFGVKGYGEAEFWFSSIKILAIIGFIILSIilnc 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  166 ------PRI---QW---GNFTPFVPNGWFsVGNAITVIFWAFF--GWEAICNLAEHFKRPEKDIVKgAVISAVVIGLLFL 231
Cdd:TIGR00913 168 gggpnhGYIgfrYWhdpGAFAGGTIGGRF-KGVCSVFVTAAFSfgGTELVALTAGEAANPRKSIPR-AAKRTFWRILVFY 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446982859  232 ALSLVTIG----------TATYGSQESNLSPIGV-IMGGTVGGGAKVVTAVLaLIICTGTANAFVASLTQLGYSLSRDGA 300
Cdd:TIGR00913 246 ILTLFLIGflvpyndprlLSSSSSSDSAASPFVIaIQNHGIKVLPHIFNAVI-LISVLSAANSSLYASSRTLYALAHQGL 324


                  ....*..
gi 446982859  301 FPKFFSR 307
Cdd:TIGR00913 325 APKIFAY 331
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH