|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
14-377 |
0e+00 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 647.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLVSKKGTTFNKLIIpTCYPK 93
Cdd:PRK06753 13 LTAAALLQEQGHEVKVFEKNESVKEVGAGIGIGDNVIKKLGNHDLAKGIKNAGQILSTMNLLDDKGTLLNKVKL-KSNTL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 94 MYSIHRKDLHQLLLSELKEDTVKWGKECVKIEqNEENALKIVFQDGSEALGNILIAADGIHSIVRKQVTQGDNYRYAGYT 173
Cdd:PRK06753 92 NVTLHRQTLIDIIKSYVKEDAIFTGKEVTKIE-NETDKVTIHFADGESEAFDLCIGADGIHSKVRQSVNADSKVRYQGYT 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 174 CWRGVTPTKNLSLTNDFIETWGTNGRFGIVPLPNNEVYWYALINAKARDPKYKAYTTTDLYNHFKTYHNPIPSILQNASD 253
Cdd:PRK06753 171 CFRGLIDDIDLKLPDCAKEYWGTKGRFGIVPLLNNQAYWFITINAKERDPKYSSFGKPHLQAYFNHYPNEVREILDKQSE 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 254 IDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIkNNAYYRQAFTEFEQKRRDRIEKISN 333
Cdd:PRK06753 251 TGILHHDIYDLKPLKSFVYGRIVLLGDAAHATTPNMGQGAGQAMEDAIVLANCL-NAYDFEKALQRYDKIRVKHTAKVIK 329
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 446989597 334 TAWKVGKIAQIESKPLTIVRNKVMKRIPKWISERQAHELYRFHL 377
Cdd:PRK06753 330 RSRKIGKIAQIESKLLVALRNRVMKRMPNALAAGQTKFLYKSKE 373
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
14-370 |
1.64e-49 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 169.35 E-value: 1.64e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLV-SKKGTTFNKL-IIPTCY 91
Cdd:COG0654 16 LALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLARGAPIRGIRVRdGSDGRVLARFdAAETGL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 92 PKMYSIHRKDLHQLLLSELKED--TVKWGKECVKIEQNEENAlKIVFQDGSEALGNILIAADGIHSIVRKQVTQG-DNYR 168
Cdd:COG0654 96 PAGLVVPRADLERALLEAARALgvELRFGTEVTGLEQDADGV-TVTLADGRTLRADLVVGADGARSAVRRLLGIGfTGRD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 169 YAGYTCWRGVTptknlsltndfietwgtngrfgivplpnnevywyalinakardpkykayttTDLYNHFKTYHNPIPSIL 248
Cdd:COG0654 175 YPQRALWAGVR---------------------------------------------------TELRARLAAAGPRLGELL 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 249 qnasDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAYYR---QAFTEFEQKRR 325
Cdd:COG0654 204 ----ELSPRSAFPLRRRRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRddeAALARYERERR 279
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 446989597 326 DRIEKISNTAWKVGKIAQIESKPLTIVRNKVMKRIPKWISERQAH 370
Cdd:COG0654 280 PRAARVQRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKGGG 324
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
10-304 |
2.42e-11 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 64.27 E-value: 2.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 10 GIAGLCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLVSKKGTTFNKLIIPT 89
Cdd:pfam01494 10 GPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFYNTRRRADLDFLT 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 90 CYPKMYSIHRKDLHQLLLSELKED--TVKWGKECVKIEQNEENALKIVFQDGSEALGNI----LIAADGIHSIVRKQVtq 163
Cdd:pfam01494 90 SPPRVTVYPQTELEPILVEHAEARgaQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTVrakyLVGCDGGRSPVRKTL-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 164 GDNYRYAGYTCWR--GVTP-TKNLSLT--NDFIETWGTN---GRFGIVPLPN---NEVYWYALINAKARDPKyKAYTTTD 232
Cdd:pfam01494 168 GIEFEGFEGVPFGslDVLFdAPDLSDPveRAFVHYLIYAphsRGFMVGPWRSagrERYYVQVPWDEEVEERP-EEFTDEE 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446989597 233 LYNhfktyhnpipsILQNASDIDMIHRDIIDIT--PMKQF-----FDKRIVFIGDAAHALTPNLGQGACQAIEDAIILA 304
Cdd:pfam01494 247 LKQ-----------RLRSIVGIDLALVEILWKSiwGVASRvatryRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLA 314
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
14-325 |
6.35e-08 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 54.13 E-value: 6.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAG-----IIIAPNAMQALELYGISKKIKK-----------FGNESDGFnlvsk 77
Cdd:TIGR01988 12 LALALALARSGLKVALIEATPLPAPADPGfdnrvSALSAASIRLLEKLGVWDKIEParaqpirdihvSDGGSFGA----- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 78 kgTTFNKLIIPTCyPKMYSIHRKDLHQLLLSELKED-----TVKWGKECVkieQNEENALKIVFQDGSEALGNILIAADG 152
Cdd:TIGR01988 87 --LRFDADEIGLE-ALGYVVENRVLQQALWERLQELpnvtlLCPARVVEL---PRHSDHVELTLDDGQQLRARLLVGADG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 153 IHSIVRKQV---TQGDNYRYAGYTCwrgvtptkNLSLTNDF----IETWGTNGRFGIVPLPNNevyWYALI----NAKAR 221
Cdd:TIGR01988 161 ANSKVRQLAgipTTGWDYGQSAVVA--------NVKHERPHqgtaWERFTPTGPLALLPLPDN---RSSLVwtlpPEEAE 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 222 DpkykaytttdlynhfktyhnpipsiLQNASD---IDMIHR-------DIIDITP----------MKQFFDKRIVFIGDA 281
Cdd:TIGR01988 230 R-------------------------LLALSDeefLAELQRafgsrlgAITLVGErhafplslthAKRYVAPRLALIGDA 284
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 446989597 282 AHALTPNLGQGACQAIEDAIILAECIKNNAYYRQAF------TEFEQKRR 325
Cdd:TIGR01988 285 AHTIHPLAGQGLNLGLRDVAALAEVLEDARRRGEDIgslrvlQRYERRRR 334
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
14-377 |
0e+00 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 647.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLVSKKGTTFNKLIIpTCYPK 93
Cdd:PRK06753 13 LTAAALLQEQGHEVKVFEKNESVKEVGAGIGIGDNVIKKLGNHDLAKGIKNAGQILSTMNLLDDKGTLLNKVKL-KSNTL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 94 MYSIHRKDLHQLLLSELKEDTVKWGKECVKIEqNEENALKIVFQDGSEALGNILIAADGIHSIVRKQVTQGDNYRYAGYT 173
Cdd:PRK06753 92 NVTLHRQTLIDIIKSYVKEDAIFTGKEVTKIE-NETDKVTIHFADGESEAFDLCIGADGIHSKVRQSVNADSKVRYQGYT 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 174 CWRGVTPTKNLSLTNDFIETWGTNGRFGIVPLPNNEVYWYALINAKARDPKYKAYTTTDLYNHFKTYHNPIPSILQNASD 253
Cdd:PRK06753 171 CFRGLIDDIDLKLPDCAKEYWGTKGRFGIVPLLNNQAYWFITINAKERDPKYSSFGKPHLQAYFNHYPNEVREILDKQSE 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 254 IDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIkNNAYYRQAFTEFEQKRRDRIEKISN 333
Cdd:PRK06753 251 TGILHHDIYDLKPLKSFVYGRIVLLGDAAHATTPNMGQGAGQAMEDAIVLANCL-NAYDFEKALQRYDKIRVKHTAKVIK 329
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 446989597 334 TAWKVGKIAQIESKPLTIVRNKVMKRIPKWISERQAHELYRFHL 377
Cdd:PRK06753 330 RSRKIGKIAQIESKLLVALRNRVMKRMPNALAAGQTKFLYKSKE 373
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
14-348 |
3.80e-51 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 175.06 E-value: 3.80e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLVSKKGTtfnkLI--IPTC- 90
Cdd:PRK06847 17 LSAAIALRRAGIAVDLVEIDPEWRVYGAGITLQGNALRALRELGVLDECLEAGFGFDGVDLFDPDGT----LLaeLPTPr 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 91 -----YPKMYSIHRKDLHQLLLSELKED--TVKWGKECVKIEQNEEnALKIVFQDGSEALGNILIAADGIHSIVRKQVTq 163
Cdd:PRK06847 93 lagddLPGGGGIMRPALARILADAARAAgaDVRLGTTVTAIEQDDD-GVTVTFSDGTTGRYDLVVGADGLYSKVRSLVF- 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 164 GDNY--RYAGYTCWRGVTPtknlsLTNDFIETW---GTNGRFGIVPLPNNEVYWYALinaKARDPKYKaYTTTDLYNHFK 238
Cdd:PRK06847 171 PDEPepEYTGQGVWRAVLP-----RPAEVDRSLmylGPTTKAGVVPLSEDLMYLFVT---EPRPDNPR-IEPDTLAALLR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 239 ----TYHNPIpsILQNASDIDMIHRdiIDITPMKQFFDK------RIVFIGDAAHALTPNLGQGACQAIEDAIILAECIK 308
Cdd:PRK06847 242 ellaPFGGPV--LQELREQITDDAQ--VVYRPLETLLVPapwhrgRVVLIGDAAHATTPHLAQGAGMAIEDAIVLAEELA 317
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 446989597 309 NNAYYRQAFTEFEQKRRDRIEKISNTAWKVGKIaQIESKP 348
Cdd:PRK06847 318 RHDSLEAALQAYYARRWERCRMVVEASARIGRI-EIEGGD 356
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
14-370 |
1.64e-49 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 169.35 E-value: 1.64e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLV-SKKGTTFNKL-IIPTCY 91
Cdd:COG0654 16 LALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLARGAPIRGIRVRdGSDGRVLARFdAAETGL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 92 PKMYSIHRKDLHQLLLSELKED--TVKWGKECVKIEQNEENAlKIVFQDGSEALGNILIAADGIHSIVRKQVTQG-DNYR 168
Cdd:COG0654 96 PAGLVVPRADLERALLEAARALgvELRFGTEVTGLEQDADGV-TVTLADGRTLRADLVVGADGARSAVRRLLGIGfTGRD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 169 YAGYTCWRGVTptknlsltndfietwgtngrfgivplpnnevywyalinakardpkykayttTDLYNHFKTYHNPIPSIL 248
Cdd:COG0654 175 YPQRALWAGVR---------------------------------------------------TELRARLAAAGPRLGELL 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 249 qnasDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAYYR---QAFTEFEQKRR 325
Cdd:COG0654 204 ----ELSPRSAFPLRRRRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRddeAALARYERERR 279
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 446989597 326 DRIEKISNTAWKVGKIAQIESKPLTIVRNKVMKRIPKWISERQAH 370
Cdd:COG0654 280 PRAARVQRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKGGG 324
|
|
| PRK07538 |
PRK07538 |
hypothetical protein; Provisional |
14-331 |
2.76e-37 |
|
hypothetical protein; Provisional
Pssm-ID: 236046 [Multi-domain] Cd Length: 413 Bit Score: 138.88 E-value: 2.76e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLVSKKGTTF----------N 83
Cdd:PRK07538 13 LTLALTLHQRGIEVVVFEAAPELRPLGVGINLLPHAVRELAELGLLDALDAIGIRTRELAYFNRHGQRIwseprglaagY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 84 KliiptcYPKmYSIHRKDLHQLLLSELKE----DTVKWGKECVKIEQNEENALKIVFQDGSEAL----GNILIAADGIHS 155
Cdd:PRK07538 93 D------WPQ-YSIHRGELQMLLLDAVRErlgpDAVRTGHRVVGFEQDADVTVVFLGDRAGGDLvsvrGDVLIGADGIHS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 156 IVRKQV-TQGDNYRYAGYTCWRGVTPTKNLSLTNDFIETWGTNGRFGIVPL-PNNEVYWYALIN--AKARDPKYKAYTTT 231
Cdd:PRK07538 166 AVRAQLyPDEGPPRWNGVMMWRGVTEAPPFLTGRSMVMAGHLDGKLVVYPIsEPVDADGRQLINwvAEVRVDDAGAPRRE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 232 D---------LYNHFKTYHNP---IPSILQNASDI---DMIHRDiiditPMKQFFDKRIVFIGDAAHALTPNLGQGACQA 296
Cdd:PRK07538 246 DwnrpgdledFLPHFADWRFDwldVPALIRAAEAIyeyPMVDRD-----PLPRWTRGRVTLLGDAAHPMYPVGSNGASQA 320
|
330 340 350
....*....|....*....|....*....|....*
gi 446989597 297 IEDAIILAECIKNNAYYRQAFTEFEQKRRDRIEKI 331
Cdd:PRK07538 321 ILDARALADALAAHGDPEAALAAYEAERRPATAQI 355
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
14-358 |
3.55e-28 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 113.59 E-value: 3.55e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDgfNLVSKKGTTFNKLI-IPT--- 89
Cdd:PRK08163 17 LAAALALARQGIKVKLLEQAAEIGEIGAGIQLGPNAFSALDALGVGEAARQRAVFTD--HLTMMDAVDAEEVVrIPTgqa 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 90 -----CYPkmYS-IHRKDLHQLLLSELKED---TVKWGKECVKIEQNEENAlKIVFQDGSEALGNILIAADGIHSIVRKQ 160
Cdd:PRK08163 95 frarfGNP--YAvIHRADIHLSLLEAVLDHplvEFRTSTHVVGIEQDGDGV-TVFDQQGNRWTGDALIGCDGVKSVVRQS 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 161 VTqGDNYRYAGYTCWRGVTPTKNL--SLTNDFIETWGTngrfgivplPNNEVYWYALINAKardpkykaytttdLYNHFK 238
Cdd:PRK08163 172 LV-GDAPRVTGHVVYRAVIDVDDMpeDLRINAPVLWAG---------PHCHLVHYPLRGGE-------------QYNLVV 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 239 TYHNPIP--------SILQNASDIDMIH---RDIIDI------------TPMKQFFDKRIVFIGDAAHALTPNLGQGACQ 295
Cdd:PRK08163 229 TFHSREQeewgvkdgSKEEVLSYFEGIHprpRQMLDKptswkrwatadrEPVAKWSTGRVTLLGDAAHPMTQYMAQGACM 308
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446989597 296 AIEDAIILAECIK-NNAYYRQAFTEFEQKRRDRIEKISNTAWKVGKI---AQIESkpltIVRNKVMK 358
Cdd:PRK08163 309 ALEDAVTLGKALEgCDGDAEAAFALYESVRIPRTARVVLSAREMGRIyhaKGVER----QVRNLLWK 371
|
|
| PLN02927 |
PLN02927 |
antheraxanthin epoxidase/zeaxanthin epoxidase |
14-335 |
2.54e-22 |
|
antheraxanthin epoxidase/zeaxanthin epoxidase
Pssm-ID: 178515 [Multi-domain] Cd Length: 668 Bit Score: 98.63 E-value: 2.54e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEpTVAGAG-----IIIAPNAMQALELYGI--SKKIKKFGN-ESDGFN-LVSK-KGTTFN 83
Cdd:PLN02927 94 LVFALAAKKKGFDVLVFEKDLS-AIRGEGkyrgpIQIQSNALAALEAIDIdvAEQVMEAGCiTGDRINgLVDGiSGSWYV 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 84 KL--IIPTC---YPKMYSIHRKDLHQLLLSELKEDTVKWGKECVKIEqNEENALKIVFQDGSEALGNILIAADGIHSIVR 158
Cdd:PLN02927 173 KFdtFTPAAsrgLPVTRVISRMTLQQILARAVGEDVIRNESNVVDFE-DSGDKVTVVLENGQRYEGDLLVGADGIWSKVR 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 159 KQVTQGDNYRYAGYTCWRGVTptknlsltnDFIET----------WGTNGRFGIVPLPNNEVYWYALINAKARDPKYKAY 228
Cdd:PLN02927 252 NNLFGRSEATYSGYTCYTGIA---------DFIPAdiesvgyrvfLGHKQYFVSSDVGGGKMQWYAFHEEPAGGADAPNG 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 229 TTTDLYNHFKTYHNPIPSILQNASDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAecIK 308
Cdd:PLN02927 323 MKKRLFEIFDGWCDNVLDLLHATEEDAILRRDIYDRSPGFTWGKGRVTLLGDSIHAMQPNMGQGGCMAIEDSFQLA--LE 400
|
330 340 350
....*....|....*....|....*....|....*....
gi 446989597 309 NNAYYRQ------------AFTEFEQKRRDRIEKISNTA 335
Cdd:PLN02927 401 LDEAWKQsvetntpvdvvsSLKRYEESRRLRVAIIHAMA 439
|
|
| PRK06475 |
PRK06475 |
FAD-binding protein; |
10-364 |
1.06e-21 |
|
FAD-binding protein;
Pssm-ID: 180582 [Multi-domain] Cd Length: 400 Bit Score: 95.66 E-value: 1.06e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 10 GIAGLCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKK------IKKFGNESDGFNLVSKKGTTFN 83
Cdd:PRK06475 11 GVAGLSAALELAARGWAVTIIEKAQELSEVGAGLQLAPNAMRHLERLGVADRlsgtgvTPKALYLMDGRKARPLLAMQLG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 84 KLIIPTCYPKMYSIHRKDLHQLLLSELKED---TVKWGKECVKIEQNEEN-ALKIVFQDGSEALGN-ILIAADGIHSIVR 158
Cdd:PRK06475 91 DLARKRWHHPYIVCHRADLQSALLDACRNNpgiEIKLGAEMTSQRQTGNSiTATIIRTNSVETVSAaYLIACDGVWSMLR 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 159 KQvTQGDNYRYAGYTCWRGVTPTKNL------SLTN-DFIETW-GTNGRFGIVPLPNNEVYWYALINAKARDPKYKAYT- 229
Cdd:PRK06475 171 AK-AGFSKARFSGHIAWRTTLAADALpasflsAMPEhKAVSAWlGNKAHFIAYPVKGGKFFNFVAITGGENPGEVWSKTg 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 230 -TTDLYNHFKTYHNPIPSILQNASD------IDMIHRDIIDItpmkqffdKRIVFIGDAAHALTPNLGQGACQAIEDAII 302
Cdd:PRK06475 250 dKAHLKSIYADWNKPVLQILAAIDEwtywplFEMADAQFVGP--------DRTIFLGDASHAVTPFAAQGAAMAIEDAAA 321
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446989597 303 LAECIKNNAyYRQAFTEFEQKRRDRIEKISNTAwKVGKIAQIESKPLTIVRNKVMK-RIPKWI 364
Cdd:PRK06475 322 LAEALDSDD-QSAGLKRFDSVRKERIAAVAKRG-QLNRFAYHATGIFALGRNMLFAiRSPESF 382
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
14-305 |
1.58e-18 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 86.13 E-value: 1.58e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEP-TVAGAGIIIAPNAMQALELYGIsKKIKKFGNESDGFNLVSKKGTTFNKLIIP---T 89
Cdd:PRK07236 19 LFAALLLRRAGWDVDVFERSPTElDGRGAGIVLQPELLRALAEAGV-ALPADIGVPSRERIYLDRDGRVVQRRPMPqtqT 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 90 CYPKMYsihrkdlhQLLLSELKEDTVKWGKECVKIEQNEENALkIVFQDGSEALGNILIAADGIHSIVRKQVTQGDNYRY 169
Cdd:PRK07236 98 SWNVLY--------RALRAAFPAERYHLGETLVGFEQDGDRVT-ARFADGRRETADLLVGADGGRSTVRAQLLPDVRPTY 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 170 AGYTCWRGVTPTKNLSL-TNDFIEtwgtnGRFG------------IVPLPNNEVY---------WYalinAKARDPkyka 227
Cdd:PRK07236 169 AGYVAWRGLVDEAALPPeARAALR-----DRFTfqlgpgshilgyPVPGEDGSTEpgkrrynwvWY----RNAPAG---- 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 228 yttTDLYNHF-----KTYHNPIPSILQNASDIDMIHRD-----------------------IIDITPMKQFFDkRIVFIG 279
Cdd:PRK07236 236 ---EELDELLtdrdgTRRPFSVPPGALRDDVLAELRDDaaellapvfaelveataqpfvqaIFDLEVPRMAFG-RVALLG 311
|
330 340
....*....|....*....|....*.
gi 446989597 280 DAAHALTPNLGQGACQAIEDAIILAE 305
Cdd:PRK07236 312 DAAFVARPHTAAGVAKAAADAVALAE 337
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
14-326 |
5.97e-16 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 77.32 E-value: 5.97e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEP---TVAGAgiiIAPNAMQALELYGISKKIKkfgNESDGFNLVSKKGTTFNkliIPTC 90
Cdd:COG0644 6 SAAARRLARAGLSVLLLEKGSFPgdkICGGG---LLPRALEELEPLGLDEPLE---RPVRGARFYSPGGKSVE---LPPG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 91 YPKMYSIHRKDLHQLLLSELKED--TVKWGKECVKIEQnEENALKIVFQDGSEALGNILIAADGIHSIVRKQV----TQG 164
Cdd:COG0644 77 RGGGYVVDRARFDRWLAEQAEEAgaEVRTGTRVTDVLR-DDGRVVVRTGDGEEIRADYVVDADGARSLLARKLglkrRSD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 165 DNYRYA-GYTCWRGVTPTKNLSlTNDFIETWGTNGRFG---IVPLPNNEVywyalinakardpkykaytttdlynhfkty 240
Cdd:COG0644 156 EPQDYAlAIKEHWELPPLEGVD-PGAVEFFFGEGAPGGygwVFPLGDGRV------------------------------ 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 241 hnpipSIlqnasdidmihrDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECI----KNNAYYRQA 316
Cdd:COG0644 205 -----SV------------GIPLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAIaealEGGDFSAEA 267
|
330
....*....|
gi 446989597 317 FTEFEQKRRD 326
Cdd:COG0644 268 LAEYERRLRE 277
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
10-304 |
2.42e-11 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 64.27 E-value: 2.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 10 GIAGLCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLVSKKGTTFNKLIIPT 89
Cdd:pfam01494 10 GPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFYNTRRRADLDFLT 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 90 CYPKMYSIHRKDLHQLLLSELKED--TVKWGKECVKIEQNEENALKIVFQDGSEALGNI----LIAADGIHSIVRKQVtq 163
Cdd:pfam01494 90 SPPRVTVYPQTELEPILVEHAEARgaQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTVrakyLVGCDGGRSPVRKTL-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 164 GDNYRYAGYTCWR--GVTP-TKNLSLT--NDFIETWGTN---GRFGIVPLPN---NEVYWYALINAKARDPKyKAYTTTD 232
Cdd:pfam01494 168 GIEFEGFEGVPFGslDVLFdAPDLSDPveRAFVHYLIYAphsRGFMVGPWRSagrERYYVQVPWDEEVEERP-EEFTDEE 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446989597 233 LYNhfktyhnpipsILQNASDIDMIHRDIIDIT--PMKQF-----FDKRIVFIGDAAHALTPNLGQGACQAIEDAIILA 304
Cdd:pfam01494 247 LKQ-----------RLRSIVGIDLALVEILWKSiwGVASRvatryRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLA 314
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
49-363 |
1.05e-08 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 56.28 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 49 AMQALELYGISKKIKKFGNESDGFNLVSKKGTTFNKL----IIPTCYPKMYSIHRKDLHQLLLSEL--KEDTVkWGKECV 122
Cdd:PRK07588 48 GYEVAKRMGITDQLREAGYQIEHVRSVDPTGRRKADLnvdsFRRMVGDDFTSLPRGDLAAAIYTAIdgQVETI-FDDSIA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 123 KIEQnEENALKIVFQDGSEALGNILIAADGIHSIVRKQV--TQGDNYRYAGytCWRGVTPTKNLSLTNDFIE-TWGTNGR 199
Cdd:PRK07588 127 TIDE-HRDGVRVTFERGTPRDFDLVIGADGLHSHVRRLVfgPERDFEHYLG--CKVAACVVDGYRPRDERTYvLYNEVGR 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 200 -FGIVPLPNNEVYWYALINAKARDPKY-KAYTTTDLYNHFKTYHNPIPSILQNASDIDMIHRDIIDITPMKQFFDKRIVF 277
Cdd:PRK07588 204 qVARVALRGDRTLFLFIFRAEHDNPPLtPAEEKQLLRDQFGDVGWETPDILAALDDVEDLYFDVVSQIRMDRWSRGRVAL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 278 IGDAAHALTPNLGQGACQAIEDAIILA-ECIKNNAYYRQAFTEFEQKRRDRIEKISNTAWKVGKIAQIESKPLTIVRNKV 356
Cdd:PRK07588 284 VGDAAACPSLLGGEGSGLAITEAYVLAgELARAGGDHRRAFDAYEKRLRPFIAGKQAAAAKFLSVFAPKTRFGLYVRNIA 363
|
....*....
gi 446989597 357 MK--RIPKW 363
Cdd:PRK07588 364 MKimNLPPV 372
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
14-325 |
6.35e-08 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 54.13 E-value: 6.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAG-----IIIAPNAMQALELYGISKKIKK-----------FGNESDGFnlvsk 77
Cdd:TIGR01988 12 LALALALARSGLKVALIEATPLPAPADPGfdnrvSALSAASIRLLEKLGVWDKIEParaqpirdihvSDGGSFGA----- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 78 kgTTFNKLIIPTCyPKMYSIHRKDLHQLLLSELKED-----TVKWGKECVkieQNEENALKIVFQDGSEALGNILIAADG 152
Cdd:TIGR01988 87 --LRFDADEIGLE-ALGYVVENRVLQQALWERLQELpnvtlLCPARVVEL---PRHSDHVELTLDDGQQLRARLLVGADG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 153 IHSIVRKQV---TQGDNYRYAGYTCwrgvtptkNLSLTNDF----IETWGTNGRFGIVPLPNNevyWYALI----NAKAR 221
Cdd:TIGR01988 161 ANSKVRQLAgipTTGWDYGQSAVVA--------NVKHERPHqgtaWERFTPTGPLALLPLPDN---RSSLVwtlpPEEAE 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 222 DpkykaytttdlynhfktyhnpipsiLQNASD---IDMIHR-------DIIDITP----------MKQFFDKRIVFIGDA 281
Cdd:TIGR01988 230 R-------------------------LLALSDeefLAELQRafgsrlgAITLVGErhafplslthAKRYVAPRLALIGDA 284
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 446989597 282 AHALTPNLGQGACQAIEDAIILAECIKNNAYYRQAF------TEFEQKRR 325
Cdd:TIGR01988 285 AHTIHPLAGQGLNLGLRDVAALAEVLEDARRRGEDIgslrvlQRYERRRR 334
|
|
| PRK08255 |
PRK08255 |
bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase; |
275-336 |
4.70e-07 |
|
bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase;
Pssm-ID: 236203 [Multi-domain] Cd Length: 765 Bit Score: 51.86 E-value: 4.70e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446989597 275 IVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAY-YRQAFTEFEQKRRDRIEKISNTAW 336
Cdd:PRK08255 271 VVLMGDAAHTAHFSIGSGTKLALEDAIELARCLHEHPGdLPAALAAYEEERRVEVLRIQNAAR 333
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
276-325 |
2.86e-06 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 48.70 E-value: 2.86e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 446989597 276 VFIGDAAHALTPNLGQGACQAIEDAI----ILAECIKNNAYYRQAFTEFEQKRR 325
Cdd:PRK06185 287 LCIGDAAHAMSPVGGVGINLAIQDAVaaanILAEPLRRGRVSDRDLAAVQRRRE 340
|
|
| PRK05868 |
PRK05868 |
FAD-binding protein; |
14-330 |
3.59e-05 |
|
FAD-binding protein;
Pssm-ID: 180297 [Multi-domain] Cd Length: 372 Bit Score: 45.36 E-value: 3.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 14 LCAAISLQKIGLDVKVYDKNTEPTVAGAGIIIAPNAMQALELYGISKKIKKFGNESDGFNLVSKKGTTFNKLI--IPTCY 91
Cdd:PRK05868 14 TAAAYWLGRHGYSVTMVERHPGLRPGGQAIDVRGPALDVLERMGLLAAAQEHKTRIRGASFVDRDGNELFRDTesTPTGG 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 92 P---KMYSIHRKDLHQLLLSELKEDTVKWGKECVKIEQNEENALKIVFQDGSEALGNILIAADGIHSIVRKQVTQGDNYR 168
Cdd:PRK05868 94 PvnsPDIELLRDDLVELLYGATQPSVEYLFDDSISTLQDDGDSVRVTFERAAAREFDLVIGADGLHSNVRRLVFGPEEQF 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 169 YAGYTCWRGVTPTKNLsLTNDFIETW--GTNGRFGIVPLPNNEVYWYAL--INAKAR-DPKYKAYTTTDLYNHFKTYHNP 243
Cdd:PRK05868 174 VKRLGTHAAIFTVPNF-LELDYWQTWhyGDSTMAGVYSARNNTEARAALafMDTELRiDYRDTEAQFAELQRRMAEDGWV 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 244 IPSILQNASDIDMIHRDIIDITPMKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILA-ECIKNNAYYRQAFTEFEQ 322
Cdd:PRK05868 253 RAQLLHYMRSAPDFYFDEMSQILMDRWSRGRVALVGDAGYCCSPLSGQGTSVALLGAYILAgELKAAGDDYQLGFANYHA 332
|
....*...
gi 446989597 323 KRRDRIEK 330
Cdd:PRK05868 333 EFHGFVER 340
|
|
| PRK08849 |
PRK08849 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
134-325 |
4.58e-05 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 181564 [Multi-domain] Cd Length: 384 Bit Score: 45.15 E-value: 4.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 134 IVFQDGSEALGNILIAADGIHSIVRKQ----VTQGDnYRYAGY------------TCWRGVTPTknlsltndfietwgtn 197
Cdd:PRK08849 146 VTLESGAEIEAKWVIGADGANSQVRQLagigITAWD-YRQHCMlinveteqpqqdITWQQFTPS---------------- 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 198 GRFGIVPLPNNE--VYWYaliNAKARDPKYKAYTTTDLYNHFKTYhnpIPSILqnaSDIDMIHRDIIDITP--MKQFFDK 273
Cdd:PRK08849 209 GPRSFLPLCGNQgsLVWY---DSPKRIKQLSAMNPEQLRSEILRH---FPAEL---GEIKVLQHGSFPLTRrhAQQYVKN 279
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 446989597 274 RIVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAYYRQA-FTEFEQKRR 325
Cdd:PRK08849 280 NCVLLGDAAHTINPLAGQGVNLGFKDVDVLLAETEKQGVLNDAsFARYERRRR 332
|
|
| PRK06184 |
PRK06184 |
hypothetical protein; Provisional |
104-300 |
4.55e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235728 [Multi-domain] Cd Length: 502 Bit Score: 42.28 E-value: 4.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 104 QLLLSELKED--TVKWGKECVKIEQNEEN-ALKIVFQDGSEAL-GNILIAADGIHSIVRKQVTQGdnyrYAGYTcwRGVT 179
Cdd:PRK06184 113 RILRERLAELghRVEFGCELVGFEQDADGvTARVAGPAGEETVrARYLVGADGGRSFVRKALGIG----FPGET--LGID 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 180 PT--KNLSLTN---DFIETWGT-NGRF-GIVPLPNNEVYWYALINAKARDPKYKAYTTTDLYNhfktyhnpipsilqnas 252
Cdd:PRK06184 187 RMlvADVSLTGldrDAWHQWPDgDMGMiALCPLPGTDLFQIQAPLPPGGEPDLSADGLTALLA----------------- 249
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446989597 253 diDMIHRDIIDITPMK-------------QFFDKRIVFIGDAAHALTPNLGQGACQAIEDA 300
Cdd:PRK06184 250 --ERTGRTDIRLHSVTwasafrmnarladRYRVGRVFLAGDAAHVHPPAGGQGLNTSVQDA 308
|
|
| PRK06617 |
PRK06617 |
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated |
269-326 |
6.78e-04 |
|
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Pssm-ID: 168629 [Multi-domain] Cd Length: 374 Bit Score: 41.45 E-value: 6.78e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 446989597 269 QFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAyyrqAFTEFEQKRRD 326
Cdd:PRK06617 269 RYFHNRIVLIADTAHTVHPLAGQGLNQGIKDIEILSMIVSNNG----TLQEYQKLRQE 322
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
267-325 |
9.22e-04 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 41.05 E-value: 9.22e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446989597 267 MKQFFDKRIVFIGDAAHALTPNLGQGACQAIEDAIILAEC----IKNNAYYRQAFTEFEQKRR 325
Cdd:PRK07045 279 LDRYHKRNVVLLGDAAHSIHPITGQGMNLAIEDAGELGACldlhLSGQIALADALERFERIRR 341
|
|
| PRK06996 |
PRK06996 |
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; |
272-327 |
2.36e-03 |
|
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;
Pssm-ID: 235905 [Multi-domain] Cd Length: 398 Bit Score: 39.67 E-value: 2.36e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 446989597 272 DKRIVFIGDAAHALTPNLGQGACQAIEDAIILAECIKNNAYYRQAFTEFEQKRR-DR 327
Cdd:PRK06996 290 NGRIAAVGNAAQTLHPVAGQGLNLGLRDAHTLADALSDHGATPLALATFAARRAlDR 346
|
|
| PRK05714 |
PRK05714 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
266-369 |
6.09e-03 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 168201 [Multi-domain] Cd Length: 405 Bit Score: 38.27 E-value: 6.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446989597 266 PMKQFFDKRIV-----FIGDAAHALTPNLGQGACQAIEDAIILAECIKnNAYYR-------QAFTEFEQKRRDRIEKISN 333
Cdd:PRK05714 273 PLRQRHAKRYVepglaLIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLL-HAAERgerladvRVLSRFERRRMPHNLALMA 351
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 446989597 334 TAWKVGKIAQIESKPLTIVRN---KVMKRIP--KWISERQA 369
Cdd:PRK05714 352 AMEGFERLFQADPLPLRWLRNtglKLVDQMPeaKALFVRQA 392
|
|
| |
