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Conserved domains on  [gi|503243772|ref|WP_013478433|]
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pentapeptide repeat-containing protein [Asticcacaulis excentricus]

Protein Classification

pentapeptide repeat-containing protein( domain architecture ID 11442852)

pentapeptide repeat-containing protein (PRP) adopts a beta-helical structure and may have a targeting or structural function

CATH:  2.160.20.10
PubMed:  33925937|9655353

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
44-232 1.18e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


:

Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 115.81  E-value: 1.18e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  44 DVSGLDFRGRDLRDADFTAAIVVGADLSGALlDQSNLYCVDMQMANLTRASLRRTDLRGACLRGANLADVDLFEADLREg 123
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLSGAL-SGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTG- 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 124 alalpdkaaglayvevsTRVSDAGFTNLRGANLERSKLSGIQAMKADFTDAILKSCKLVRANLKQAIMDNCDLSGADMSG 203
Cdd:COG1357   79 -----------------ADLSGANLANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSG 141

                        170       180
                 ....*....|....*....|....*....
gi 503243772 204 CDVSGASLKDAVMIGTKTESWNASQTNLS 232
Cdd:COG1357  142 ANLSGADLSGADLSGANLSGANLSGANLA 170
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
150-412 1.11e-23

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


:

Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 96.93  E-value: 1.11e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 150 NLRGANLERSKLSGIQAMKADFTDAILKSCkLVRANLKQAIMDNCDLSGADMSGCDVSGASLKDAvmigtkteswnasqt 229
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGA--------------- 64

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 230 NLSGVltekaagtdisrlpydemirdhaewvdsvgkagkpsAFDKADLRalksikglnlaalsakGAVFYGLDMrgIQLQ 309
Cdd:COG1357   65 NLSGA------------------------------------DLSGANLT----------------GADLSGANL--ANLS 90

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 310 GAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANigplklagdrifpadLREARIRGANLQRADLRQARLDGADLS 389
Cdd:COG1357   91 GANLSGANLSGANLRGANLSGANLSGADLSGADLSGAN---------------LSGADLSGANLSGANLSGADLSGADLS 155

                        250       260
                 ....*....|....*....|...
gi 503243772 390 RSDLDKAQMTLESLVNVVCVGLK 412
Cdd:COG1357  156 GANLSGANLSGANLANLEGADLK 178
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
44-232 1.18e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 115.81  E-value: 1.18e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  44 DVSGLDFRGRDLRDADFTAAIVVGADLSGALlDQSNLYCVDMQMANLTRASLRRTDLRGACLRGANLADVDLFEADLREg 123
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLSGAL-SGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTG- 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 124 alalpdkaaglayvevsTRVSDAGFTNLRGANLERSKLSGIQAMKADFTDAILKSCKLVRANLKQAIMDNCDLSGADMSG 203
Cdd:COG1357   79 -----------------ADLSGANLANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSG 141

                        170       180
                 ....*....|....*....|....*....
gi 503243772 204 CDVSGASLKDAVMIGTKTESWNASQTNLS 232
Cdd:COG1357  142 ANLSGADLSGADLSGANLSGANLSGANLA 170
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
150-412 1.11e-23

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 96.93  E-value: 1.11e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 150 NLRGANLERSKLSGIQAMKADFTDAILKSCkLVRANLKQAIMDNCDLSGADMSGCDVSGASLKDAvmigtkteswnasqt 229
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGA--------------- 64

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 230 NLSGVltekaagtdisrlpydemirdhaewvdsvgkagkpsAFDKADLRalksikglnlaalsakGAVFYGLDMrgIQLQ 309
Cdd:COG1357   65 NLSGA------------------------------------DLSGANLT----------------GADLSGANL--ANLS 90

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 310 GAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANigplklagdrifpadLREARIRGANLQRADLRQARLDGADLS 389
Cdd:COG1357   91 GANLSGANLSGANLRGANLSGANLSGADLSGADLSGAN---------------LSGADLSGANLSGANLSGADLSGADLS 155

                        250       260
                 ....*....|....*....|...
gi 503243772 390 RSDLDKAQMTLESLVNVVCVGLK 412
Cdd:COG1357  156 GANLSGANLSGANLANLEGADLK 178
PRK15196 PRK15196
type III secretion system effector PipB2;
47-222 3.59e-17

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 82.36  E-value: 3.59e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  47 GLDFRGRDLRDADFTAAIVVGADLSGALLDQSNLYCVD-----MQMANLTRASLRRTDLRGACLR-----GANLADVDLF 116
Cdd:PRK15196 151 GMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADceganFKGANLSGTSLGDSNFKNACLEdsimcGATLDHANLT 230

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 117 EADLREGALAlpdkaaGLAYVEvstrvsdagfTNLRGANLERSKLSGIQAMKADFTDAILKSCK----------LVRANL 186
Cdd:PRK15196 231 GANLQHASLL------GCSMIE----------CNCSGANMDHTNLSGATLIRADMSGATLQGATimaaimegavLTRANL 294

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 503243772 187 KQAIMDNCDLSGADMSGCDVSGASLKDAVMIGTKTE 222
Cdd:PRK15196 295 RKASFISTNLDGADLAEANLNNTCFKDCTLTHLRTE 330
PRK15196 PRK15196
type III secretion system effector PipB2;
185-393 7.01e-13

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 69.26  E-value: 7.01e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 185 NLKQAIMDNCDLSGADMSGCDVSGASLKDAVMIGTKTESWNASQTNLSGVltekaagtdisrlpydemirdhaewvdSVG 264
Cdd:PRK15196 153 NLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGT---------------------------SLG 205

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 265 KAgkpsafdkadlralksikglNLAALSAKGAVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLE 344
Cdd:PRK15196 206 DS--------------------NFKNACLEDSIMCGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLI 265

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 503243772 345 GANIGPLKLAGDRIFPADLREARIRGANLQRADLRQARLDGADLSRSDL 393
Cdd:PRK15196 266 RADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANL 314
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 307-345 2.74e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 49.26  E-value: 2.74e-08
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 503243772  307 QLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEG 345
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 169-208 1.42e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 44.64  E-value: 1.42e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 503243772  169 ADFTDAILKSCKLVRANLKQAIMDNCDLSGADMSGCDVSG 208
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
44-232 1.18e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 115.81  E-value: 1.18e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  44 DVSGLDFRGRDLRDADFTAAIVVGADLSGALlDQSNLYCVDMQMANLTRASLRRTDLRGACLRGANLADVDLFEADLREg 123
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLSGAL-SGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTG- 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 124 alalpdkaaglayvevsTRVSDAGFTNLRGANLERSKLSGIQAMKADFTDAILKSCKLVRANLKQAIMDNCDLSGADMSG 203
Cdd:COG1357   79 -----------------ADLSGANLANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSG 141

                        170       180
                 ....*....|....*....|....*....
gi 503243772 204 CDVSGASLKDAVMIGTKTESWNASQTNLS 232
Cdd:COG1357  142 ANLSGADLSGADLSGANLSGANLSGANLA 170
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
36-220 6.61e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 113.88  E-value: 6.61e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  36 ARAVFAWMDVSGLDFRGRDLRDADFTAAIvVGADLSGALLDQSNLYCVDMQMANLTRASLRRTDLRGACLRGANLADVDL 115
Cdd:COG1357    3 SGADLSGADLSGADLSGADLSGANLSGAL-SGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 116 FEADLregalalpdkaaglayveVSTRVSDAGFTNLRGANLERSKLSGIQAMKADFTDAILKSCKLVRANLKQAIMDNCD 195
Cdd:COG1357   82 SGANL------------------ANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGAN 143

                        170       180
                 ....*....|....*....|....*
gi 503243772 196 LSGADMSGCDVSGASLKDAVMIGTK 220
Cdd:COG1357  144 LSGADLSGADLSGANLSGANLSGAN 168
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
150-412 1.11e-23

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 96.93  E-value: 1.11e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 150 NLRGANLERSKLSGIQAMKADFTDAILKSCkLVRANLKQAIMDNCDLSGADMSGCDVSGASLKDAvmigtkteswnasqt 229
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGA--------------- 64

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 230 NLSGVltekaagtdisrlpydemirdhaewvdsvgkagkpsAFDKADLRalksikglnlaalsakGAVFYGLDMrgIQLQ 309
Cdd:COG1357   65 NLSGA------------------------------------DLSGANLT----------------GADLSGANL--ANLS 90

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 310 GAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANigplklagdrifpadLREARIRGANLQRADLRQARLDGADLS 389
Cdd:COG1357   91 GANLSGANLSGANLRGANLSGANLSGADLSGADLSGAN---------------LSGADLSGANLSGANLSGADLSGADLS 155

                        250       260
                 ....*....|....*....|...
gi 503243772 390 RSDLDKAQMTLESLVNVVCVGLK 412
Cdd:COG1357  156 GANLSGANLSGANLANLEGADLK 178
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
36-211 3.24e-19

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 84.61  E-value: 3.24e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  36 ARAVFAWMDVSGLDFRGRDLRDADFTAAIVVGADLSGALLDQSNLYCVDmqMANLTRASLRRTDLRGACLRGANLADVDL 115
Cdd:COG1357   37 SGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGAN--LANLSGANLSGANLSGANLRGANLSGANL 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 116 FEADLREgalalpdkaaglayvevstrvsdagfTNLRGANLERSKLSGiqamkADFTdailkscklvRANLKQAIMDNCD 195
Cdd:COG1357  115 SGADLSG--------------------------ADLSGANLSGADLSG-----ANLS----------GANLSGADLSGAD 153

                        170
                 ....*....|....*.
gi 503243772 196 LSGADMSGCDVSGASL 211
Cdd:COG1357  154 LSGANLSGANLSGANL 169
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
37-197 1.40e-17

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 79.99  E-value: 1.40e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  37 RAVFAWMDVSGLDFRGRDLRDADFTAAIVVGADLSGALLDQSNLycVDMQMANLTRASLRRTDLRGACLRGANLADVDLF 116
Cdd:COG1357   43 GANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLS 120

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 117 EADLREGALAlpdkaaglayvevSTRVSDAgftNLRGANLERSKLSGiqamkADFTDAILKSCKLVRANLkqAIMDNCDL 196
Cdd:COG1357  121 GADLSGANLS-------------GADLSGA---NLSGANLSGADLSG-----ADLSGANLSGANLSGANL--ANLEGADL 177


                 .
gi 503243772 197 S 197
Cdd:COG1357  178 K 178
PRK15196 PRK15196
type III secretion system effector PipB2;
47-222 3.59e-17

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 82.36  E-value: 3.59e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  47 GLDFRGRDLRDADFTAAIVVGADLSGALLDQSNLYCVD-----MQMANLTRASLRRTDLRGACLR-----GANLADVDLF 116
Cdd:PRK15196 151 GMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADceganFKGANLSGTSLGDSNFKNACLEdsimcGATLDHANLT 230

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 117 EADLREGALAlpdkaaGLAYVEvstrvsdagfTNLRGANLERSKLSGIQAMKADFTDAILKSCK----------LVRANL 186
Cdd:PRK15196 231 GANLQHASLL------GCSMIE----------CNCSGANMDHTNLSGATLIRADMSGATLQGATimaaimegavLTRANL 294

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 503243772 187 KQAIMDNCDLSGADMSGCDVSGASLKDAVMIGTKTE 222
Cdd:PRK15196 295 RKASFISTNLDGADLAEANLNNTCFKDCTLTHLRTE 330
PRK15196 PRK15196
type III secretion system effector PipB2;
185-393 7.01e-13

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 69.26  E-value: 7.01e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 185 NLKQAIMDNCDLSGADMSGCDVSGASLKDAVMIGTKTESWNASQTNLSGVltekaagtdisrlpydemirdhaewvdSVG 264
Cdd:PRK15196 153 NLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGT---------------------------SLG 205

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 265 KAgkpsafdkadlralksikglNLAALSAKGAVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLE 344
Cdd:PRK15196 206 DS--------------------NFKNACLEDSIMCGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLI 265

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 503243772 345 GANIGPLKLAGDRIFPADLREARIRGANLQRADLRQARLDGADLSRSDL 393
Cdd:PRK15196 266 RADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANL 314
PRK15197 PRK15197
type III secretion system effector PipB;
301-405 1.08e-12

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 68.03  E-value: 1.08e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 301 LDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANIGPLKLAGDRIFPADLREARIRGANLQRADLRQ 380
Cdd:PRK15197 154 LNLRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTA 233

                         90       100
                 ....*....|....*....|....*
gi 503243772 381 ARLDGADLSRSDLDKAQMTLESLVN 405
Cdd:PRK15197 234 AILFGSDLTDTKLNGAKLDKIALTL 258
PRK15196 PRK15196
type III secretion system effector PipB2;
67-246 4.22e-11

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 63.87  E-value: 4.22e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  67 GADLSGALLDQSNLYCVDMQMANLTRASLRRTDLRGACLRGANLADVDLfeadlregalalpdkaaglayvevstrvsda 146
Cdd:PRK15196 156 GAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSL------------------------------- 204

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 147 GFTNLRGANLERSKLSGIQAMKADFTDAILK-----SCKLVRANLKQAIMDNCDLSGADMSGCDVSGASLKDAVMIGTKT 221
Cdd:PRK15196 205 GDSNFKNACLEDSIMCGATLDHANLTGANLQhasllGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIM 284

                        170       180
                 ....*....|....*....|....*..
gi 503243772 222 ESWNASQTNL--SGVLTEKAAGTDISR 246
Cdd:PRK15196 285 EGAVLTRANLrkASFISTNLDGADLAE 311
PRK15196 PRK15196
type III secretion system effector PipB2;
285-403 5.01e-10

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 60.79  E-value: 5.01e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 285 GLNLAALSAKGAVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANIGPLKLAGDRIFP---- 360
Cdd:PRK15196 171 DADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASLLGCSMIEcncs 250

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 503243772 361 -ADLREARIRGANLQRADLRQARLDGADLSRSDLDKAQMTLESL 403
Cdd:PRK15196 251 gANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANL 294
PRK15196 PRK15196
type III secretion system effector PipB2;
147-391 1.02e-09

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 59.63  E-value: 1.02e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 147 GFTNLRGANLERSKLSGIQAMKADFTDAILKSCKLVRANLKQAIMDNCDLSGADMSGCDVSGASLKDAVMIGtkteswna 226
Cdd:PRK15196 150 GGMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCG-------- 221

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 227 sqtnlsgvltekaagtdisrlpydemirdhaewvdsvgkagkpSAFDKADLralksiKGLNLAALSAKGAVFYGLDMRGI 306
Cdd:PRK15196 222 -------------------------------------------ATLDHANL------TGANLQHASLLGCSMIECNCSGA 252

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 307 QLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANIGPLKLAGDRIFPADLREARIRGANLQRADLRQARLDGA 386
Cdd:PRK15196 253 NMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTLTHLRTEDA 332


                 ....*
gi 503243772 387 DLSRS 391
Cdd:PRK15196 333 TMSTS 337
PRK15197 PRK15197
type III secretion system effector PipB;
40-174 2.31e-09

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 58.02  E-value: 2.31e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  40 FAWMDVSGLDFRGRDLRDADFTAAIVVGADLSGALLDQSNLYCVDMQMANLTRASLRRTDLRGACLRGANLADVDLFEAD 119
Cdd:PRK15197 161 LAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSD 240

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 503243772 120 LREgalalpdkaaglayvevstrvsdagfTNLRGANLERSKLSGIQAMK-ADFTDA 174
Cdd:PRK15197 241 LTD--------------------------TKLNGAKLDKIALTLAKALTgADLTGS 270
PRK15196 PRK15196
type III secretion system effector PipB2;
291-388 6.20e-09

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 57.32  E-value: 6.20e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 291 LSAKGavfyGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANIGPLKLAGDRIFPADLREARIRG 370
Cdd:PRK15196 146 LTAQG----GMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCG 221

                         90
                 ....*....|....*...
gi 503243772 371 ANLQRADLRQARLDGADL 388
Cdd:PRK15196 222 ATLDHANLTGANLQHASL 239
PRK15197 PRK15197
type III secretion system effector PipB;
286-400 1.80e-08

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 55.32  E-value: 1.80e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 286 LNLAALSAKGAVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANIGplklagdrifPADLRE 365
Cdd:PRK15197 154 LNLRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLT----------HADLTC 223

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 503243772 366 ARIRGANLQRADLRQARLDGADLSRSDLDKAQMTL 400
Cdd:PRK15197 224 ANMSGVNLTAAILFGSDLTDTKLNGAKLDKIALTL 258
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 307-345 2.74e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 49.26  E-value: 2.74e-08
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 503243772  307 QLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEG 345
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15197 PRK15197
type III secretion system effector PipB;
279-389 3.59e-08

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 54.55  E-value: 3.59e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 279 ALKSIKGLNLAALSAKGAVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANigplkLAGDRI 358
Cdd:PRK15197 162 AHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVN-----LTAAIL 236

                         90       100       110
                 ....*....|....*....|....*....|..
gi 503243772 359 FPADLREARIRGANLQRADLRQAR-LDGADLS 389
Cdd:PRK15197 237 FGSDLTDTKLNGAKLDKIALTLAKaLTGADLT 268
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 311-347 2.48e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 46.56  E-value: 2.48e-07
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 503243772  311 AHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGAN 347
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGAN 37
PRK15197 PRK15197
type III secretion system effector PipB;
143-245 3.49e-07

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 51.47  E-value: 3.49e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772 143 VSDAGFTNLRGANL-----ERSKLSGIQAMKADFTDAILKSCKLVRANL---------------KQAIMDNCDLSGADMS 202
Cdd:PRK15197 148 ITEDGFLNLRGVNLahkdfQGEDLSDIDASNADFRETTLSNVNLVGANLccanlhavnlmgsnmTKANLTHADLTCANMS 227

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 503243772 203 GCDVSGASLKDAVMIGTKTESWNASQTNLSgvLTEKAAGTDIS 245
Cdd:PRK15197 228 GVNLTAAILFGSDLTDTKLNGAKLDKIALT--LAKALTGADLT 268
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 302-340 3.97e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 46.18  E-value: 3.97e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 503243772  302 DMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDG 340
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 361-399 9.32e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 45.02  E-value: 9.32e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 503243772  361 ADLREARIRGANLQRADLRQARLDGADLSRSDLDKAQMT 399
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 169-208 1.42e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 44.64  E-value: 1.42e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 503243772  169 ADFTDAILKSCKLVRANLKQAIMDNCDLSGADMSGCDVSG 208
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 179-216 4.06e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 43.10  E-value: 4.06e-06
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 503243772  179 CKLVRANLKQAIMDNCDLSGADMSGCDVSGASLKDAVM 216
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 68-110 6.13e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 42.71  E-value: 6.13e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 503243772   68 ADLSGALLDQSNLycvdmQMANLTRASLRRTDLRGACLRGANL 110
Cdd:pfam00805   1 ANLSGANLSGANL-----SGANLSGANLTGANLSGADLSGANL 38
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 316-348 1.62e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.56  E-value: 1.62e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 503243772  316 ADLRNCDLSGADLRGAQMKGVRMDGANLEGANI 348
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADL 33
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 88-122 1.84e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.56  E-value: 1.84e-05
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 503243772   88 ANLTRASLRRTDLRGACLRGANLADVDLFEADLRE 122
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSG 35
PRK15197 PRK15197
type III secretion system effector PipB;
95-221 2.15e-05

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 46.08  E-value: 2.15e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503243772  95 LRRTDLRGACLRGANLADVDLFEADLREGALalpdkaaglayvevstrvSDagfTNLRGANLERSKLSGIQAMKADFTDA 174
Cdd:PRK15197 156 LRGVNLAHKDFQGEDLSDIDASNADFRETTL------------------SN---VNLVGANLCCANLHAVNLMGSNMTKA 214

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 503243772 175 ILKSCKLVRANLKQAIMDNCDLSGADMSGCDVSGASLKDAVMIGTKT 221
Cdd:PRK15197 215 NLTHADLTCANMSGVNLTAAILFGSDLTDTKLNGAKLDKIALTLAKA 261
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 174-213 2.67e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.79  E-value: 2.67e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 503243772  174 AILKSCKLVRANLKQAIMDNCDLSGADMSGCDVSGASLKD 213
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 296-335 2.89e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.79  E-value: 2.89e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 503243772  296 AVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKG 335
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 54-97 3.73e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.40  E-value: 3.73e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 503243772   54 DLRDADFTaaivvGADLSGALLDQSNLYCVDMQMANLTRASLRR 97
Cdd:pfam00805   2 NLSGANLS-----GANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 295-330 1.15e-04

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 39.25  E-value: 1.15e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503243772  295 GAVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRG 330
Cdd:pfam00805   5 GANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
169-235 1.18e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 40.34  E-value: 1.18e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 503243772  169 ADFTDAILKSCKLVRANLKQAIMDNCDLSGADMSGCDVSGASLKDAVMIGTKTESWNASQTNLSGVL 235
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSN 67
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 78-115 1.39e-04

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 38.86  E-value: 1.39e-04
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 503243772   78 SNLYCVDMQMANLTRASLRRTDLRGACLRGANLADVDL 115
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 341-390 1.46e-04

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 38.86  E-value: 1.46e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 503243772  341 ANLEGANigplkLAGdrifpADLREARIRGANLQRADLRQARLDGADLSR 390
Cdd:pfam00805   1 ANLSGAN-----LSG-----ANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 88-121 1.65e-04

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 38.86  E-value: 1.65e-04
                          10        20        30
                  ....*....|....*....|....*....|....
gi 503243772   88 ANLTRASLRRTDLRGACLRGANLADVDLFEADLR 121
Cdd:pfam00805   6 ANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
320-388 1.86e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.56  E-value: 1.86e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 503243772  320 NCDLSGAD-----LRGAQMKGVRMDGANLEGANIGPLKLAGdrifpADLREARIRGANLQRADLRQARLDGADL 388
Cdd:pfam13599  10 GCKLSGTEfyhatLKDCNFTECNLVNVNFDDCNLRDVDFLE-----AQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
156-213 2.57e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.18  E-value: 2.57e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503243772  156 LERSKLSGiqamkADFTDAILKSCKLVRANLKQAIMDNCDLS----------GADMSGCDVSGASLKD 213
Cdd:pfam13599   8 FEGCKLSG-----TEFYHATLKDCNFTECNLVNVNFDDCNLRdvdfleaqlkNAQFSGCNLKNSNFSD 70
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
284-344 2.59e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.18  E-value: 2.59e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 503243772  284 KGLNLAALSAKGAVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLE 344
Cdd:pfam13599   9 EGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFS 69
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
46-110 2.64e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.18  E-value: 2.64e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 503243772   46 SGLDFRGRDLRDADFTAAIVVGADLSGALLDQSNLYCVDMQMANLTRASLRRTDLRGACLRGANL 110
Cdd:pfam13599  14 SGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
294-355 7.85e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 38.02  E-value: 7.85e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 503243772  294 KGAVFYGLDMRGIQLQGAHLEGADLRNCDLSGADLRGAQMKGVRMDGANLEGANIGPLKLAG 355
Cdd:pfam13599  14 SGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKG 75
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 189-233 1.14e-03

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 36.55  E-value: 1.14e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 503243772  189 AIMDNCDLSGADMSGCDVSGASLKDAVMIGTkteswNASQTNLSG 233
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGA-----DLSGANLSG 40
PRK15196 PRK15196
type III secretion system effector PipB2;
44-120 1.56e-03

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 40.37  E-value: 1.56e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 503243772  44 DVSGLDFRGRDLRDADFTAAIVVGADLSGALLDQSNLYCVDMQMANLTRASLRRTDLRGACLRGANLADVDLFEADL 120
Cdd:PRK15196 258 NLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTLTHLRTEDATM 334
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
149-211 4.46e-03

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 35.71  E-value: 4.46e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 503243772  149 TNLRGANLERSKLSGIQAMKADFTDAILKSCKLVRANLKQAIMDNCDLSGADMSGCDVSGASL 211
Cdd:pfam13599  16 TEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 93-125 6.04e-03

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 34.24  E-value: 6.04e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 503243772   93 ASLRRTDLRGACLRGANLADVDLFEADLREGAL 125
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADL 33
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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