|
Name |
Accession |
Description |
Interval |
E-value |
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
18-426 |
8.93e-144 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 415.42 E-value: 8.93e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 18 YMGVLGSTIILGSSPVSAMDSVGNQSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLE 97
Cdd:pfam08017 1 YMGVLGSTIILGSSPVSAMDSVGNQSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 98 RRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLE 177
Cdd:pfam08017 81 RRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 178 RRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQNNVLIKSQDNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLE 257
Cdd:pfam08017 161 RRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 258 RRQRDVENKSQGNVLERRQnnvliksqdnvlerrqRDADNKSQGNVLERRQRDVENKSQGNVLERRQHDVENKSQVGQLI 337
Cdd:pfam08017 241 RRQRDAENKSQGNVLERRQ----------------RDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQVGQLI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 338 GKNPLFSKSTVSRENNHSSQGDSNKQSFSKKVSQVTNVANRPMLTNNSRTISVINKLPKTGDDQNVIFKLVGFGLILLTS 417
Cdd:pfam08017 305 GKNPLLSKSIISRENNHSSQGDSNKQSFSKKVSQVTNVANRPMLTNNSRTISVINKLPKTGDDQNVIFKLVGFGLILLTS 384
|
....*....
gi 516240899 418 LCGLRRNEN 426
Cdd:pfam08017 385 RCGLRRNEN 393
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
121-332 |
1.63e-10 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 63.27 E-value: 1.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 121 NKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDADNKSQGNVLERRQRDVE 200
Cdd:PTZ00341 925 NKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEENIE 1004
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 201 NKSQGNVLERRQNNVLIKSQDNV--LERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDVENKSQgNVLERRQNN 278
Cdd:PTZ00341 1005 ENVEENVEENIEENVEEYDEENVeeVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVEEIEE-NIEENIEEN 1083
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 516240899 279 VliksQDNVLERRQRDADNKSQgNVLERRQRDVENKSQGNVLERRQHDVENKSQ 332
Cdd:PTZ00341 1084 V----EENVEENVEEIEENVEE-NVEENAEENAEENAEENAEEYDDENPEEHNE 1132
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
48-338 |
5.09e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 5.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 48 LERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQgnv 127
Cdd:COG1196 244 LEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE--- 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 128 LERRQRDAENRSQgnvlERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDADNKSQGNVLERRQRDVENKSQGNV 207
Cdd:COG1196 321 LEEELAELEEELE----ELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 208 LERRQNNVLIKSQDNVLERRQRDADNKS---QGNVLERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQNNVLIKSQ 284
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEeleEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 516240899 285 DNVLERRQRDADNKSQGNVLERRQRDVENKSQGnvlERRQHDVENKSQVGQLIG 338
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEG---VKAALLLAGLRGLAGAVA 527
|
|
| LPXTG_anchor |
TIGR01167 |
LPXTG-motif cell wall anchor domain; This model describes the LPXTG motif-containing region ... |
393-426 |
9.12e-06 |
|
LPXTG-motif cell wall anchor domain; This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other]
Pssm-ID: 273478 [Multi-domain] Cd Length: 34 Bit Score: 42.08 E-value: 9.12e-06
10 20 30
....*....|....*....|....*....|....
gi 516240899 393 KLPKTGDDQNVIFKLVGFGLILLTSLCGLRRNEN 426
Cdd:TIGR01167 1 KLPKTGESGNSLLLLLGLLLLGLGGLLLRKRKKK 34
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Fibrinogen_BP |
pfam08017 |
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family ... |
18-426 |
8.93e-144 |
|
Fibrinogen binding protein; Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.
Pssm-ID: 311808 [Multi-domain] Cd Length: 393 Bit Score: 415.42 E-value: 8.93e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 18 YMGVLGSTIILGSSPVSAMDSVGNQSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLE 97
Cdd:pfam08017 1 YMGVLGSTIILGSSPVSAMDSVGNQSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 98 RRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLE 177
Cdd:pfam08017 81 RRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 178 RRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQNNVLIKSQDNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLE 257
Cdd:pfam08017 161 RRQRDAENRSQGNVLERRQRDAENKSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENRSQGNVLE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 258 RRQRDVENKSQGNVLERRQnnvliksqdnvlerrqRDADNKSQGNVLERRQRDVENKSQGNVLERRQHDVENKSQVGQLI 337
Cdd:pfam08017 241 RRQRDAENKSQGNVLERRQ----------------RDAENRSQGNVLERRQRDAENRSQGNVLERRQRDAENKSQVGQLI 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 338 GKNPLFSKSTVSRENNHSSQGDSNKQSFSKKVSQVTNVANRPMLTNNSRTISVINKLPKTGDDQNVIFKLVGFGLILLTS 417
Cdd:pfam08017 305 GKNPLLSKSIISRENNHSSQGDSNKQSFSKKVSQVTNVANRPMLTNNSRTISVINKLPKTGDDQNVIFKLVGFGLILLTS 384
|
....*....
gi 516240899 418 LCGLRRNEN 426
Cdd:pfam08017 385 RCGLRRNEN 393
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
121-332 |
1.63e-10 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 63.27 E-value: 1.63e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 121 NKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDADNKSQGNVLERRQRDVE 200
Cdd:PTZ00341 925 NKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEENIE 1004
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 201 NKSQGNVLERRQNNVLIKSQDNV--LERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDVENKSQgNVLERRQNN 278
Cdd:PTZ00341 1005 ENVEENVEENIEENVEEYDEENVeeVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVEEIEE-NIEENIEEN 1083
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 516240899 279 VliksQDNVLERRQRDADNKSQgNVLERRQRDVENKSQGNVLERRQHDVENKSQ 332
Cdd:PTZ00341 1084 V----EENVEENVEEIEENVEE-NVEENAEENAEENAEENAEEYDDENPEEHNE 1132
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
73-279 |
1.11e-09 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 60.57 E-value: 1.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 73 NKSQGNVLERRQRDVENKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDVE 152
Cdd:PTZ00341 925 NKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEENIE 1004
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 153 NKSQGNVLERRQRDVENKSQGNV--LERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQNNVliksqDNVLERRQRD 230
Cdd:PTZ00341 1005 ENVEENVEENIEENVEEYDEENVeeVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENV-----EEIEENIEEN 1079
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 516240899 231 ADNKSQGNVLERRQRDADNKSQgNVLERRQRDVENKSQGNVLERRQNNV 279
Cdd:PTZ00341 1080 IEENVEENVEENVEEIEENVEE-NVEENAEENAEENAEENAEEYDDENP 1127
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
41-244 |
2.84e-09 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 59.41 E-value: 2.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 41 NQSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENKSQGNVLERRQRDAD 120
Cdd:PTZ00341 925 NKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEENIE 1004
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 121 NKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQG--NVLERRQRDVENKSQGNVLERRQRDADNKSQgNVLERRQRD 198
Cdd:PTZ00341 1005 ENVEENVEENIEENVEEYDEENVEEVEENVEEYDEENveEIEENAEENVEENIEENIEEYDEENVEEIEE-NIEENIEEN 1083
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 516240899 199 VENKSQGNVLERRQN---NVLIKSQDNVLERRQRDADNKSQGNVLERRQ 244
Cdd:PTZ00341 1084 VEENVEENVEEIEENveeNVEENAEENAEENAEENAEEYDDENPEEHNE 1132
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
105-316 |
3.78e-09 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 59.03 E-value: 3.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 105 NKSQGNVLERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAD 184
Cdd:PTZ00341 925 NKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEENIE 1004
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 185 NKSQGNVLERRQRDVENKSQGNVLERRQNNVLIKSQ--DNVLERRQRDADNKSQGNVLERRQRDADNKSQgNVLERRQRD 262
Cdd:PTZ00341 1005 ENVEENVEENIEENVEEYDEENVEEVEENVEEYDEEnvEEIEENAEENVEENIEENIEEYDEENVEEIEE-NIEENIEEN 1083
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 516240899 263 VENKSQGNVLERRQNnvlikSQDNVLERRQRDADNKSQGNVLERRQRDVENKSQ 316
Cdd:PTZ00341 1084 VEENVEENVEEIEEN-----VEENVEENAEENAEENAEENAEEYDDENPEEHNE 1132
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
49-266 |
6.59e-08 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 54.91 E-value: 6.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 49 ERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQGNVL 128
Cdd:PRK12678 87 ARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAERTEE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 129 ERRQRDAENRSQGnvleRRQRDVENKSQGNVlERRQRDVENKSQGNVLERRQRdADNKSQGNVLERRQRDVENKSQGNVL 208
Cdd:PRK12678 167 EERDERRRRGDRE----DRQAEAERGERGRR-EERGRDGDDRDRRDRREQGDR-REERGRRDGGDRRGRRRRRDRRDARG 240
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 516240899 209 ERRQNNVLIKSQDNVLERRQRDadnksqgnvlERRQRDADNKSQGNVLERRQRDVENK 266
Cdd:PRK12678 241 DDNREDRGDRDGDDGEGRGGRR----------GRRFRDRDRRGRRGGDGGNEREPELR 288
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
32-215 |
1.72e-07 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 53.64 E-value: 1.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 32 PVSAMDSVGNQSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENKSQGNV 111
Cdd:PTZ00341 948 EEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEENIEENVEENVEENIEENVEEYDEENV 1027
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 112 --LERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQgNVLERRQRDVENKSQGNVLErrqrdADNKSQG 189
Cdd:PTZ00341 1028 eeVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVEEIEE-NIEENIEENVEENVEENVEE-----IEENVEE 1101
|
170 180
....*....|....*....|....*.
gi 516240899 190 NVLERRQRDVENKSQGNVLERRQNNV 215
Cdd:PTZ00341 1102 NVEENAEENAEENAEENAEEYDDENP 1127
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
32-225 |
3.31e-07 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 52.60 E-value: 3.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 32 PVSAMDSVGNQSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENKSQGNV 111
Cdd:PRK12678 102 AEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDR 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 112 LERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDADNKSQGNV 191
Cdd:PRK12678 182 QAEAERGERGRREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGRGGR 261
|
170 180 190
....*....|....*....|....*....|....
gi 516240899 192 LERRQRDVENKSQGNVLERRQNNVLIKSQDNVLE 225
Cdd:PRK12678 262 RGRRFRDRDRRGRRGGDGGNEREPELREDDVLVP 295
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
48-338 |
5.09e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 5.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 48 LERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQgnv 127
Cdd:COG1196 244 LEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE--- 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 128 LERRQRDAENRSQgnvlERRQRDVENKSQGNVLERRQRDVENKSQGNVLERRQRDADNKSQGNVLERRQRDVENKSQGNV 207
Cdd:COG1196 321 LEEELAELEEELE----ELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 208 LERRQNNVLIKSQDNVLERRQRDADNKS---QGNVLERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQNNVLIKSQ 284
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEeleEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 516240899 285 DNVLERRQRDADNKSQGNVLERRQRDVENKSQGnvlERRQHDVENKSQVGQLIG 338
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEG---VKAALLLAGLRGLAGAVA 527
|
|
| LPXTG_anchor |
TIGR01167 |
LPXTG-motif cell wall anchor domain; This model describes the LPXTG motif-containing region ... |
393-426 |
9.12e-06 |
|
LPXTG-motif cell wall anchor domain; This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other]
Pssm-ID: 273478 [Multi-domain] Cd Length: 34 Bit Score: 42.08 E-value: 9.12e-06
10 20 30
....*....|....*....|....*....|....
gi 516240899 393 KLPKTGDDQNVIFKLVGFGLILLTSLCGLRRNEN 426
Cdd:TIGR01167 1 KLPKTGESGNSLLLLLGLLLLGLGGLLLRKRKKK 34
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
97-330 |
1.36e-05 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 47.21 E-value: 1.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 97 ERRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVL 176
Cdd:PRK12678 87 ARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAERTEE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 177 ERRQRDadnksqgnvlERRQRDVENKSQGNVLERRQNnvliksqdnvlERRQRDADNKSQGNVLERRQRdADNKSQGNVL 256
Cdd:PRK12678 167 EERDER----------RRRGDREDRQAEAERGERGRR-----------EERGRDGDDRDRRDRREQGDR-REERGRRDGG 224
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 516240899 257 ERRQRDVENKSQGNVLERRQNNVLIKSQDNVLERRQRDadnksqgnvlERRQRDVENKSQGNVLERRQHDVENK 330
Cdd:PRK12678 225 DRRGRRRRRDRRDARGDDNREDRGDRDGDDGEGRGGRR----------GRRFRDRDRRGRRGGDGGNEREPELR 288
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
81-314 |
2.73e-05 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 46.44 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 81 ERRQRDVENKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQGNVLERRQRDAENRSQGNVLERRQRDVENKSQGNVL 160
Cdd:PRK12678 87 ARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARADAAERTEE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 161 ERRQRDVENKSQGnvleRRQRDADNKSQGNVlERRQRDVENKSQGNVLERRQNNvliksqdnvlERRQRDADNKSQGNVL 240
Cdd:PRK12678 167 EERDERRRRGDRE----DRQAEAERGERGRR-EERGRDGDDRDRRDRREQGDRR----------EERGRRDGGDRRGRRR 231
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 516240899 241 ERRQRDADNKSQGNVLERRQRDVENKSQGnvleRRqnnvliksqdnvlERRQRDADNKSQGNVLERRQRDVENK 314
Cdd:PRK12678 232 RRDRRDARGDDNREDRGDRDGDDGEGRGG----RR-------------GRRFRDRDRRGRRGGDGGNEREPELR 288
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
174-329 |
5.15e-05 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 45.55 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 174 NVLERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQNNVLIKSQDNVLERRQRDADNKSQGNVLERRQRDADNKSQG 253
Cdd:PTZ00341 922 NLINKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEE 1001
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 516240899 254 NVLERRQRDVENKSQGNVLERRQNNVliksqdNVLERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQHDVEN 329
Cdd:PTZ00341 1002 NIEENVEENVEENIEENVEEYDEENV------EEVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVEE 1071
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
94-226 |
2.42e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 2.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 94 NVLERRQRDAENKSQgNVLERRQRDADNKSQGNVLE------RRQRDAENrsqgnvlERRQRDVENKSQGNVLERRQRDV 167
Cdd:PRK12704 27 KIAEAKIKEAEEEAK-RILEEAKKEAEAIKKEALLEakeeihKLRNEFEK-------ELRERRNELQKLEKRLLQKEENL 98
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 516240899 168 ENKSQGnvLERRQRDADNKSQGnvLERRQRDVENKSQgnVLERrqnnvLIKSQDNVLER 226
Cdd:PRK12704 99 DRKLEL--LEKREEELEKKEKE--LEQKQQELEKKEE--ELEE-----LIEEQLQELER 146
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
65-261 |
7.12e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.95 E-value: 7.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 65 ERRQRDVENKSQGNvleRRQRDVENKSQGNVLERRQRDAENKSQGNvleRRQR------DADNKSQGNVLERRQRDAENR 138
Cdd:PRK10811 600 PERQQDRRKPRQNN---RRDRNERRDTRDNRTRREGRENREENRRN---RRQAqqqtaeTRESQQAEVTEKARTQDEQQQ 673
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 139 SQGNVLERRQRDvenksqgnvlERRQRDVENKSQGNVLERRQRDADNKSQGNVLERRQR-------------DVENKSQG 205
Cdd:PRK10811 674 APRRERQRRRND----------EKRQAQQEAKALNVEEQSVQETEQEERVQQVQPRRKQrqlnqkvrieqsvAEEAVAPV 743
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 516240899 206 NVLERRQNNVLIKSQDNVLERRQRDADNKSQGNVLERRQRDADNKSQgNVLERRQR 261
Cdd:PRK10811 744 VEETVAAEPVVQEVPAPRTELVKVPLPVVAQTAPEQDEENNAENRDN-NGMPRRSR 798
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
214-340 |
9.76e-04 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 41.70 E-value: 9.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 214 NVLIKSQDNVLERRQRDADNKSQGNVLERRQRDADNKSQGNVLERRQRDVENKSQGNVLERRQNNVLIKSQDNVLERRQR 293
Cdd:PTZ00341 922 NLINKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEE 1001
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 516240899 294 DADNKSQGNVLERRQRDVENKSQGNVLERRQHDVENKSQVGQLIGKN 340
Cdd:PTZ00341 1002 NIEENVEENVEENIEENVEEYDEENVEEVEENVEEYDEENVEEIEEN 1048
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
51-212 |
4.54e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 39.34 E-value: 4.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 51 RQRDAENRSQGNVLERRQRDVENKSQGNVLERRQRDVENKSQGNVLER-------RQRDAENKSQGNVLERRQRDADNKS 123
Cdd:pfam17380 395 RQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEeraremeRVRLEEQERQQQVERLRQQEEERKR 474
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 124 QGNVLERRQRDaenrsQGNVLERRQRDVENKSQgnvlERRQRDVENKSQGNVLERRQRDADNkSQGNVLERRQRDVENKS 203
Cdd:pfam17380 475 KKLELEKEKRD-----RKRAEEQRRKILEKELE----ERKQAMIEEERKRKLLEKEMEERQK-AIYEEERRREAEEERRK 544
|
....*....
gi 516240899 204 QGNVLERRQ 212
Cdd:pfam17380 545 QQEMEERRR 553
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
48-276 |
6.14e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 38.95 E-value: 6.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 48 LERRQRDAENRSQGNVleRRQRDVENKSQGNVLERRQRDvenKSQGNVLERRQRDAENKSQGNVLERRQRDADNKSQGNV 127
Cdd:pfam17380 350 LERIRQEERKRELERI--RQEEIAMEISRMRELERLQME---RQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQ 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 128 LERRQRDAENRSQGNVLERRQRDVEnksqgnvlerRQRDVENKSQGNVLERRQRDADNKSQGNVLERRQRDVEnksqgnV 207
Cdd:pfam17380 425 IRAEQEEARQREVRRLEEERAREME----------RVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRK------R 488
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516240899 208 LERRQNNVLIKSQDnvlERRQRDADNKSQGNVLERRQRDADNkSQGNVLERRQRDVENKSQGNVLERRQ 276
Cdd:pfam17380 489 AEEQRRKILEKELE---ERKQAMIEEERKRKLLEKEMEERQK-AIYEEERRREAEEERRKQQEMEERRR 553
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
46-156 |
6.62e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 38.61 E-value: 6.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516240899 46 NVLERRQRDAENRSQgNVLERRQRDVENKSQGNVLERRQrdvENKSQGNVLER--RQRDAENKSQGNVLERRQRDADNKS 123
Cdd:PRK12704 27 KIAEAKIKEAEEEAK-RILEEAKKEAEAIKKEALLEAKE---EIHKLRNEFEKelRERRNELQKLEKRLLQKEENLDRKL 102
|
90 100 110
....*....|....*....|....*....|...
gi 516240899 124 QGnvLERRQRDAENRSQGnvLERRQRDVENKSQ 156
Cdd:PRK12704 103 EL--LEKREEELEKKEKE--LEQKQQELEKKEE 131
|
|
| |
