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Conserved domains on  [gi|1545383350|ref|WP_126539458|]
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DUF1778 domain-containing protein [Oharaeibacter diazotrophicus]

Protein Classification

DUF1778 domain-containing protein( domain architecture ID 10008563)

DUF1778 domain-containing protein similar to Klebsiella pneumoniae protein KacA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG4453 COG4453
Uncharacterized conserved protein, DUF1778 family [Function unknown];
9-87 1.69e-20

Uncharacterized conserved protein, DUF1778 family [Function unknown];


:

Pssm-ID: 443551  Cd Length: 89  Bit Score: 77.89  E-value: 1.69e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1545383350  9 SSRIELRIPPEQKAVLARAAALENVDLTSFILGRILPEARAVVERAEHVQLSERASLRVLDLLEFPPEPTDRLRRAAKA 87
Cdd:COG4453    6 TARINLRISPEQKALIDRAAALSGKTLTDFVLEAALEAAEEVLLDQRLIRLSEEDFEAFLAALDNPPAPNPRLKRALKR 84
 
Name Accession Description Interval E-value
COG4453 COG4453
Uncharacterized conserved protein, DUF1778 family [Function unknown];
9-87 1.69e-20

Uncharacterized conserved protein, DUF1778 family [Function unknown];


Pssm-ID: 443551  Cd Length: 89  Bit Score: 77.89  E-value: 1.69e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1545383350  9 SSRIELRIPPEQKAVLARAAALENVDLTSFILGRILPEARAVVERAEHVQLSERASLRVLDLLEFPPEPTDRLRRAAKA 87
Cdd:COG4453    6 TARINLRISPEQKALIDRAAALSGKTLTDFVLEAALEAAEEVLLDQRLIRLSEEDFEAFLAALDNPPAPNPRLKRALKR 84
DUF1778 pfam08681
Protein of unknown function (DUF1778); This is a family of uncharacterized proteins. The ...
 12-86 3.71e-17

Protein of unknown function (DUF1778); This is a family of uncharacterized proteins. The structure of one of the hypothetical proteins in this family has been solved and it forms a helix structure which may form interactions with DNA.


Pssm-ID: 462557  Cd Length: 75  Bit Score: 68.80  E-value: 3.71e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1545383350 12 IELRIPPEQKAVLARAAALENVDLTSFILGRILPEARAVVERAEHVQLSERASLRVLDLLEFPPEPTDRLRRAAK 86
Cdd:pfam08681  1 LELRISPEAKELLDRAAALSGKTLTDFVLEAALEAAEKVIEDHERIRLSEEDFQAFVAALDNPPKPNPRLLKAAR 75
alt PHA02566
ADP-ribosyltransferase; Provisional
 8-55 8.23e-03

ADP-ribosyltransferase; Provisional


Pssm-ID: 222881 [Multi-domain]  Cd Length: 684  Bit Score: 33.56  E-value: 8.23e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1545383350   8 TSSRIELRIPPEQKAVLARAAALENVDLTSFILGRILPEARAVVERAE 55
Cdd:PHA02566  417 TGARDPKKLTPAESRAIREYCASGYIDINNFLLGRYKPEFYMDEEEAE 464
 
Name Accession Description Interval E-value
COG4453 COG4453
Uncharacterized conserved protein, DUF1778 family [Function unknown];
9-87 1.69e-20

Uncharacterized conserved protein, DUF1778 family [Function unknown];


Pssm-ID: 443551  Cd Length: 89  Bit Score: 77.89  E-value: 1.69e-20
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1545383350  9 SSRIELRIPPEQKAVLARAAALENVDLTSFILGRILPEARAVVERAEHVQLSERASLRVLDLLEFPPEPTDRLRRAAKA 87
Cdd:COG4453    6 TARINLRISPEQKALIDRAAALSGKTLTDFVLEAALEAAEEVLLDQRLIRLSEEDFEAFLAALDNPPAPNPRLKRALKR 84
DUF1778 pfam08681
Protein of unknown function (DUF1778); This is a family of uncharacterized proteins. The ...
 12-86 3.71e-17

Protein of unknown function (DUF1778); This is a family of uncharacterized proteins. The structure of one of the hypothetical proteins in this family has been solved and it forms a helix structure which may form interactions with DNA.


Pssm-ID: 462557  Cd Length: 75  Bit Score: 68.80  E-value: 3.71e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1545383350 12 IELRIPPEQKAVLARAAALENVDLTSFILGRILPEARAVVERAEHVQLSERASLRVLDLLEFPPEPTDRLRRAAK 86
Cdd:pfam08681  1 LELRISPEAKELLDRAAALSGKTLTDFVLEAALEAAEKVIEDHERIRLSEEDFQAFVAALDNPPKPNPRLLKAAR 75
alt PHA02566
ADP-ribosyltransferase; Provisional
 8-55 8.23e-03

ADP-ribosyltransferase; Provisional


Pssm-ID: 222881 [Multi-domain]  Cd Length: 684  Bit Score: 33.56  E-value: 8.23e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1545383350   8 TSSRIELRIPPEQKAVLARAAALENVDLTSFILGRILPEARAVVERAE 55
Cdd:PHA02566  417 TGARDPKKLTPAESRAIREYCASGYIDINNFLLGRYKPEFYMDEEEAE 464
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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