NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2564982303|ref|WP_306173772|]
View 

MULTISPECIES: TonB-dependent heme/hemoglobin receptor ChuA/ShuA [Escherichia]

Protein Classification

TonB-dependent receptor( domain architecture ID 1002108)

TonB-dependent receptor may act as a channel to allow import of extracellular nutrients, such as iron-siderophore complexes or non-Fe compounds

Gene Ontology:  GO:0022857
PubMed:  21455261

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
TonB-hemin super family cl36974
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
 1-629 0e+00

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


The actual alignment was detected with superfamily member TIGR01785:

Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 576.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVLILVDGVRQGTD 80
Cdd:TIGR01785   4 VTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINIRGLQDNRVLVVVDGARQNYQ 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  81 TG--HLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSSGFRVFGTGGTGDHSLGLGASAFGR 158
Cdd:TIGR01785  84 RGgaHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFGGLAKLSYGSNNNSFGGSVAVAGR 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 159 -TENLDGIVAWSSRDRGDLRQSNGETAPNDE-AINNMLAKGTWQIDSAQALSGLVRYYNNDAREPKN--PQTVEASDSSN 234
Cdd:TIGR01785 164 lDDNLDALVAATYRDGGNYRNGNKEEATNSAyVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLDEAQNsgPGTEYVLGSSS 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 235 PMVDRSTIQRDAQLAYKLAPVGNDWLNADAKVYWSEVRINAQNTGSSGEY---REQTTKGAKLENRSTLFADSFAShlLT 311
Cdd:TIGR01785 244 TLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDNDRSARGVGReegYQYTTYGATLQNTSRFDVASWST--LT 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 312 YGGEYYRQEQHPGGATTG--------FPQAKIDFSSGWLQDEITLRDLPITLLGGTRYDSYRGSSDG-----YKDVDADK 378
Cdd:TIGR01785 322 YGVDWMKDKRRTESFDPNsvttivpnPPSAKEYFFGLFLQDNIPLLDDRLTLSAGLRYDHYKLSPKTtadteAVDRSYSR 401

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 379 WSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRfyTNYWVPNPNLRPETNETQEYGFGLRFDDLMLSND 458
Cdd:TIGR01785 402 WSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTGDHPGTPG--GYTFAPNPNLKPETSKTWELGANLSFDNLLLDND 479

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 459 ALEFKASYFDTKAKDYISTTVDFAAATTMSY-------NVPNAKIWGWDVMTKYTTDLFSLDVAYNRTRGKDTDTGEYIS 531
Cdd:TIGR01785 480 QLQFKVAYFYNDVKDFIDLTIGVTDNVTAGMnnitqyvNIDGARIRGIEASASYDAGLWATGLSYGYTIGKDQNTNQWLS 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 532 SINPDTVTSTLNIPIAHSGFSVGWVGTFADRS------THVSSSYS-KQPGYGVNDFYVSYQGQQaLKGMTTTLVLGNAF 604
Cdd:TIGR01785 560 NIPPLKLVVTVGYRFPDRRLDLGAKAAYYERQsespttEDVAANGLlTTPGYTVVDLYATYQPNA-VKGLTVRFGVNNLT 638

                         650       660
                  ....*....|....*....|....*..
gi 2564982303 605 DKEYWSPQGIPQ--DGRNGKIFVSYQW 629
Cdd:TIGR01785 639 DRKYTPAQSVPGagPGRNFKGSVKYQF 665
 
Name Accession Description Interval E-value
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
 1-629 0e+00

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 576.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVLILVDGVRQGTD 80
Cdd:TIGR01785   4 VTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINIRGLQDNRVLVVVDGARQNYQ 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  81 TG--HLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSSGFRVFGTGGTGDHSLGLGASAFGR 158
Cdd:TIGR01785  84 RGgaHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFGGLAKLSYGSNNNSFGGSVAVAGR 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 159 -TENLDGIVAWSSRDRGDLRQSNGETAPNDE-AINNMLAKGTWQIDSAQALSGLVRYYNNDAREPKN--PQTVEASDSSN 234
Cdd:TIGR01785 164 lDDNLDALVAATYRDGGNYRNGNKEEATNSAyVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLDEAQNsgPGTEYVLGSSS 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 235 PMVDRSTIQRDAQLAYKLAPVGNDWLNADAKVYWSEVRINAQNTGSSGEY---REQTTKGAKLENRSTLFADSFAShlLT 311
Cdd:TIGR01785 244 TLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDNDRSARGVGReegYQYTTYGATLQNTSRFDVASWST--LT 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 312 YGGEYYRQEQHPGGATTG--------FPQAKIDFSSGWLQDEITLRDLPITLLGGTRYDSYRGSSDG-----YKDVDADK 378
Cdd:TIGR01785 322 YGVDWMKDKRRTESFDPNsvttivpnPPSAKEYFFGLFLQDNIPLLDDRLTLSAGLRYDHYKLSPKTtadteAVDRSYSR 401

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 379 WSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRfyTNYWVPNPNLRPETNETQEYGFGLRFDDLMLSND 458
Cdd:TIGR01785 402 WSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTGDHPGTPG--GYTFAPNPNLKPETSKTWELGANLSFDNLLLDND 479

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 459 ALEFKASYFDTKAKDYISTTVDFAAATTMSY-------NVPNAKIWGWDVMTKYTTDLFSLDVAYNRTRGKDTDTGEYIS 531
Cdd:TIGR01785 480 QLQFKVAYFYNDVKDFIDLTIGVTDNVTAGMnnitqyvNIDGARIRGIEASASYDAGLWATGLSYGYTIGKDQNTNQWLS 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 532 SINPDTVTSTLNIPIAHSGFSVGWVGTFADRS------THVSSSYS-KQPGYGVNDFYVSYQGQQaLKGMTTTLVLGNAF 604
Cdd:TIGR01785 560 NIPPLKLVVTVGYRFPDRRLDLGAKAAYYERQsespttEDVAANGLlTTPGYTVVDLYATYQPNA-VKGLTVRFGVNNLT 638

                         650       660
                  ....*....|....*....|....*..
gi 2564982303 605 DKEYWSPQGIPQ--DGRNGKIFVSYQW 629
Cdd:TIGR01785 639 DRKYTPAQSVPGagPGRNFKGSVKYQF 665
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 18-629 1.13e-107

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 338.27  E-value: 1.13e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  18 MVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVLILVDGVRQGTDTGHLNG--TFLDPALIK 95
Cdd:cd01347     1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGVdlNTIPPELIE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  96 RVEIVRGPSALLYGSGALGGVISYDTVDAKDllQEGQSSGFRV--FGTGGTGDHSLGLGAsAFGRTENLDGIVAWSSRDR 173
Cdd:cd01347    81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTD--EFGGSVTAGYgsDNSGSSGGGGFDVSG-ALADDGAFGARLYGAYRDG 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 174 GDLRQSNGETAPNDEAINNMLAKGTWQIDSAQALSGLVRYYNNDAREPKNPQTVEASD-------SSNPMVDRSTIQRDA 246
Cdd:cd01347   158 DGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGsslgggpSSNTNGDRDWDYRDR 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 247 QLAYKLAPVGNDWLNADAKVYWSEVRINAQNTG------------------SSGEYREQTTKGAKLENRSTLFADSFASH 308
Cdd:cd01347   238 YRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGdplilnggnnaaggdlgrSGYSSERDTTQLGFDAGLNAPFGTGPVAH 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 309 LLTYGGEYYRQEQHpggattgfpqakIDFSSGWLQDEITLRDlPITLLGGTRYDSYRGSSDGY------KDVDADKWSSR 382
Cdd:cd01347   318 TLTLGVEYRREELD------------EKQTALYAQDTIELTD-DLTLTLGLRYDHYDQDSKDTiaggttAKKSYSHWSPS 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 383 AGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHfsigrfYTNYWVPNPNLRPETNETQEYGFGLRFDdlmlsnDALEF 462
Cdd:cd01347   385 LGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSH------GGTAAVGNPNLKPEKSKQYELGLKYDPG------DGLTL 452

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 463 KASYFDTKAKDYIST--TVDFAAATTMSYNVPNAKIWGWDVMTKYT-TDLFSLDV--AYNRTRGKDTD---TGEYISSIN 534
Cdd:cd01347   453 SAALFRIDIKNEIVStpTNTGLGLVTVYVNGGKARIRGVELEASYDlTDGLGLTGsyTYTDTEVKRTDgatTGNRLPGIP 532

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 535 PDTVTSTLNIPIAHSGFSVGWVGTFADRSTHVSSSYS---KQPGYGVNDFYVSYQGQqalKGMTTTLVLGNAFDKEYW-- 609
Cdd:cd01347   533 KHTANLGLDYELPDEGLTAGGGVRYRGKQYADTANGNntvKVPGYTLVDLSASYQFT---KNLTLRLGVNNLFDKDYYts 609

                         650       660
                  ....*....|....*....|....*.
gi 2564982303 610 ------SPQGIPQDGRNGKIFVSYQW 629
Cdd:cd01347   610 lsvrgsGLYGYYGPGRTYYLSVSYKF 635
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
 1-586 9.07e-89

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 287.91  E-value: 9.07e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGT-GRTNGQDVNMRGYDHRGVLILVDGVRQ-- 77
Cdd:COG4771    30 VVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSgGRGGSSGISIRGLGGDRVLVLIDGVPVnn 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  78 GTDTGHLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSsgfrvFGTGGTGDHSLGLGASAFG 157
Cdd:COG4771   110 PALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVS-----LGYGSNGNGTYSGSLSLGG 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 158 RTENLDGIVAWSSRDRGDLRQSNGETAPNDEAIN--NMLAKGTWQIDSAQALSGLVRYYNNDAREPKNPQTVEASDSSNP 235
Cdd:COG4771   185 PGDKLSFLLSGSYRDRDGYLDYRNGGFVGNSGYEryNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNA 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 236 MVDRSTIQR-DAQLAYKlapvGNDWLNADAKVYWSEVRINAQNTGSSGEY-----REQTTKGAKLENRSTLFADsfasHL 309
Cdd:COG4771   265 GDRDTTTDRgNYSLRYN----GDLGDNLDLSLYYSRTDRDSTNGSLGGSTgsfsdSDDTTYGLELDLTYPLGGN----HT 336

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 310 LTYGGEYYRQEQHPGGATTGfPQAKIDFSSGWLQDEITLRDlPITLLGGTRYDSYrgssDGYKDVDADKWSSRAGMTINP 389
Cdd:COG4771   337 LTLGAEYRYDDLDSSSFLGG-ADASRDTYGLFAQDEWKLTD-KLTLTAGLRYDYY----STFGASNYTAFSPRLGLRYDL 410

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 390 TNWLMLFGSYAQAFRAPTMGEMYNDSKHfsigrFYTNYWVPNPNLRPETNETQEYGFGLRFDdlmlsNDALEFKASYFDT 469
Cdd:COG4771   411 SDNLTLRASYGRGFRAPSLAELYGSGTG-----TPGRYVLGNPDLKPETSDNYELGLEYRLG-----NGGLSLSLTGFYT 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 470 KAKDYISTTVDFAAATTMSY--NVPNAKIWGWDVMTKYT-TDLFSLDVAYNRTRGK--DTDTGEYISSINPDTVTSTLNI 544
Cdd:COG4771   481 DIKDLIVLVPVGPGPGDVLQyeNVGKARTYGLELELKYRlGKGLTLTASYTYLDSKidDGDTGEPLPNVPPHKANLGLDY 560

                         570       580       590       600
                  ....*....|....*....|....*....|....*....|....
gi 2564982303 545 PIAHSGFSVGWV--GTFADRSTHVSSSYSKQPGYGVNDFYVSYQ 586
Cdd:COG4771   561 RLPKWWLLLLLTryYGGRYVTPPSGRLEGYTPGYTLLDLRASYK 604
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
 1-629 1.47e-37

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 148.49  E-value: 1.47e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGrTNGQDVNMRGYDHRGVLILVDGVRQGTD 80
Cdd:PRK10064   33 MVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEG-DNRKGVSIRGLDSSYTLILIDGKRVNSR 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  81 TGHLNGTFLD----PA-LIKRVEIVRGPSALLYGSGALGGVIS----------YDTVDAKDLLQE----GQSSGFRVFGT 141
Cdd:PRK10064  112 NAVFRHNDFDlnwiPVdAIERIEVVRGPMSSLYGSDALGGVVNiitkkigqkwHGTVTVDTTIQEhrdrGDTYNGQFFTS 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 142 GGTGDHSLGLGA-SAFGRTENlDGIVAWSSRDRGDLRQSNGETApndeaiNNMLAKGTWQIDSAQALSGlvrYYNNDARE 220
Cdd:PRK10064  192 GPLIDGVLGMKAyGSLAKREK-DDPQNSTTTDTGETPRIEGFTS------RDGNVEFAWTPNQNHDFTA---GYGFDRQD 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 221 pknpqtvEASDSsnpmVDRSTIQRdaqLAYKLAPVGN-DWLNADAKVYWSevRINAQNTGSSGEYreqTTKGAKLENRST 299
Cdd:PRK10064  262 -------RDSDS----LDKNRLER---QNYSLSHNGRwDYGNSELKYYGE--KVENKNPGNSSPI---TSESNSIDGKYT 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 300 LFADSFAsHLLTYGGEYYRQEQHPGGATTGFPQAKIDFS--SGWLQDEITLRDlPITLLGGTRYDSYrgssdgykDVDAD 377
Cdd:PRK10064  323 LPLTAIN-QFLTFGGEWRHDKLSDAVNLTGGTSSKTSASqyALFVEDEWRIFE-PLALTTGVRMDDH--------ETYGD 392

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 378 KWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRfyTNYWVPNPNLRPETNETQEYGFGLRFDDLMLsn 457
Cdd:PRK10064  393 HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRG--ACKIVGSPDLKPETSESWELGLYYMGEEGWL-- 468

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 458 DALEFKASYFDTKAKDYI--STTVDFAAATTMS-------------------YNVPNAKIWGWDVMTKYT-TDLFSLDVA 515
Cdd:PRK10064  469 EGVESSVTVFRNDVDDRIsiSRTSDVNAAPGYQnfvgfetngrgrrvpvfryYNVNKARIQGVETELKIPfNDEWKLSLN 548

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 516 YNRTRGKDTDTGEY--ISSINPDTVTSTLN-IPIAHSGFSVGWVGTFADRSTHVSSSYSKQPGYGVNDFYVSYQGQQALK 592
Cdd:PRK10064  549 YTYNDGRDVSNGENkpLSDLPFHTANGTLDwKPLALEDWSFYVSGNYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVK 628

                         650       660       670
                  ....*....|....*....|....*....|....*...
gi 2564982303 593 GMTTTLVLGNA-FDKEYWSpqgIPQDGRNGKIFVSYQW 629
Cdd:PRK10064  629 LRAGVLNLGDKdLSRDDYS---YNEDGRRYFMAVDYRF 663
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 274-628 7.40e-32

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 129.12  E-value: 7.40e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 274 NAQNTGSSGEYREQTTKGAKLENRSTLFADSFASHLLTYGGEYYRQEQH--------PGGATTGFPQAKIDFSSGWLQDE 345
Cdd:pfam00593 103 GAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDdaydpydpANPSSSSYSDTTTDSYGLYLQDN 182

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 346 ITLRDlPITLLGGTRYDSYRGSSDGYK------DVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFS 419
Cdd:pfam00593 183 IKLTD-RLTLTLGLRYDHYSTDGDDGNgggdnfSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGG 261

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 420 IGrfytNYWVPNPNLRPETNETQEygFGLRFDDlmlsnDALEFKASYFDTKAKDYI---STTVDFAAATTMSYNVPNAKI 496
Cdd:pfam00593 262 GG----AVAGGNPDLKPETSDNYE--LGLKYDD-----GRLSLSLALFYIDIKNLItsdPDGPGLGGTVYTYTNVGKARI 330

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 497 WGWDV---MTKYTTDLFSLDVAYNRTRGKDT--DTGEYISSINPDTVTSTLNIPIAHSGFSVGWVGTFADRSTHVSSSYS 571
Cdd:pfam00593 331 RGVELelsGRLWGLGLSGGGYTYTDADDDADadDTGNPLPNVPRHTANLGLTYDFPLGGWGARLGARYVGSGERRYGDAA 410

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2564982303 572 ---KQPGYGVNDFYVSYQGQqalKGMTTTLVLGNAFDKEYW--------SPQGIPQDGRNGKIFVSYQ 628
Cdd:pfam00593 411 ntfKTPGYTLVDLSAGYRLN---KNLTLRLGVNNLFDKYYKryyssgggNLGGYPGPGRTFYLGLSYK 475
 
Name Accession Description Interval E-value
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
 1-629 0e+00

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 576.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVLILVDGVRQGTD 80
Cdd:TIGR01785   4 VTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINIRGLQDNRVLVVVDGARQNYQ 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  81 TG--HLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSSGFRVFGTGGTGDHSLGLGASAFGR 158
Cdd:TIGR01785  84 RGgaHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFGGLAKLSYGSNNNSFGGSVAVAGR 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 159 -TENLDGIVAWSSRDRGDLRQSNGETAPNDE-AINNMLAKGTWQIDSAQALSGLVRYYNNDAREPKN--PQTVEASDSSN 234
Cdd:TIGR01785 164 lDDNLDALVAATYRDGGNYRNGNKEEATNSAyVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLDEAQNsgPGTEYVLGSSS 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 235 PMVDRSTIQRDAQLAYKLAPVGNDWLNADAKVYWSEVRINAQNTGSSGEY---REQTTKGAKLENRSTLFADSFAShlLT 311
Cdd:TIGR01785 244 TLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDNDRSARGVGReegYQYTTYGATLQNTSRFDVASWST--LT 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 312 YGGEYYRQEQHPGGATTG--------FPQAKIDFSSGWLQDEITLRDLPITLLGGTRYDSYRGSSDG-----YKDVDADK 378
Cdd:TIGR01785 322 YGVDWMKDKRRTESFDPNsvttivpnPPSAKEYFFGLFLQDNIPLLDDRLTLSAGLRYDHYKLSPKTtadteAVDRSYSR 401

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 379 WSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRfyTNYWVPNPNLRPETNETQEYGFGLRFDDLMLSND 458
Cdd:TIGR01785 402 WSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTGDHPGTPG--GYTFAPNPNLKPETSKTWELGANLSFDNLLLDND 479

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 459 ALEFKASYFDTKAKDYISTTVDFAAATTMSY-------NVPNAKIWGWDVMTKYTTDLFSLDVAYNRTRGKDTDTGEYIS 531
Cdd:TIGR01785 480 QLQFKVAYFYNDVKDFIDLTIGVTDNVTAGMnnitqyvNIDGARIRGIEASASYDAGLWATGLSYGYTIGKDQNTNQWLS 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 532 SINPDTVTSTLNIPIAHSGFSVGWVGTFADRS------THVSSSYS-KQPGYGVNDFYVSYQGQQaLKGMTTTLVLGNAF 604
Cdd:TIGR01785 560 NIPPLKLVVTVGYRFPDRRLDLGAKAAYYERQsespttEDVAANGLlTTPGYTVVDLYATYQPNA-VKGLTVRFGVNNLT 638

                         650       660
                  ....*....|....*....|....*..
gi 2564982303 605 DKEYWSPQGIPQ--DGRNGKIFVSYQW 629
Cdd:TIGR01785 639 DRKYTPAQSVPGagPGRNFKGSVKYQF 665
TonB-hemlactrns TIGR01786
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ...
 1-629 1.81e-150

TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273808 [Multi-domain]  Cd Length: 715  Bit Score: 451.48  E-value: 1.81e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNA----RSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVLILVDGVR 76
Cdd:TIGR01786   3 ITVTATRTAdpqrRDLSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVEGGRGGSQGINIRGLDKNRVAVLVDGIR 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  77 QGTDTGHLNGTF-----LDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSSGFRVFGTGGTGDHSLGL 151
Cdd:TIGR01786  83 QNTSYGGQGSTFyainsIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLLKPGKDLGGLSKLGYSSANNRFTQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 152 GASAFGRTENLDGIVAWSSRDRGDLRQSNGETAPNDEA----------INNMLAKGTWQIDSAQALSGLVRYYNNDAREP 221
Cdd:TIGR01786 163 SVAAAGRNDDVDALVQATYRRGHELKNGNKANIGNESKrskpnpsdykSQSFLAKLGWQLNDAHRLGLSLEYTQTDYDEP 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 222 KNPQT--------VEASDSSNPMVDRSTIQRDAQLAYKLAPVgNDWLNADAKVY-WSEVRI-NAQNTGSSGEY------- 284
Cdd:TIGR01786 243 EMTNTsyltkplgAPLLSSTVVLGDSKTRDRRTGLDYELNPD-NSWLDTVKLALdKQYIQLyNYLNATSASDYpgvdkng 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 285 -REQTTKGAKLENRSTLFAD-SFASHLLTYGGEYYRQEQHPGGATTGFPQAKIDFSSG--------------WLQDEITL 348
Cdd:TIGR01786 322 rYKDKYDYYTLGFDTNNKIEfSVHSLSLTYGLDRFKDKVSTGDSRRNLPTAAYNLYGYegenrpvkgsnfglFLQDNIKL 401

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 349 RDLpITLLGGTRYDSYRGS-------SDGYKDVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIG 421
Cdd:TIGR01786 402 GDW-LSLSAGLRYDHYKTDpkadeskDYGAISKTYSRWSPSLGLTYKPTPWLTLYYSYSQGFRAPSFDELYGTGAHPGGG 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 422 rfyTNYWVPNPNLRPETNETQEYGFGLRFDDlmlsndaLEFKASYFDTKAKDYISTTVDFAAATTMSY----------NV 491
Cdd:TIGR01786 481 ---PYTFLPNPNLKPETSKNWEIGINLHFDQ-------LDFKVSYFRNDYKDFIDLGIGVTAKGNMAQvgsntitnyvNI 550

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 492 PNAKIWGWDVMTKYTTDL-------FSLDVAYNRTRGKDTDTGEYISSINPDTVTSTLNIPIAHSGFSVGWVGTFADRST 564
Cdd:TIGR01786 551 DNARIRGIELSGRYDLGSffsgpdgWTTTLKYGYTKGKDSDTNPWLNAITPLKVVLGLGYDHPDEKWGVGLTLTFSGAKD 630

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 565 HV-------------SSSYSKQPGYGVNDFYVSYqgqQALKGMTTTLVLGNAFDKEYWSPQGIPQD----------GRNG 621
Cdd:TIGR01786 631 AVdayatyyengeaaKAGPLRTPSYTVVDLYGYY---KPNKNLTLRFGVYNLLDRKYTTWESARQAgplatgytapGRNY 707


                  ....*...
gi 2564982303 622 KIFVSYQW 629
Cdd:TIGR01786 708 KASVEYKF 715
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 18-629 1.13e-107

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 338.27  E-value: 1.13e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  18 MVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVLILVDGVRQGTDTGHLNG--TFLDPALIK 95
Cdd:cd01347     1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGVdlNTIPPELIE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  96 RVEIVRGPSALLYGSGALGGVISYDTVDAKDllQEGQSSGFRV--FGTGGTGDHSLGLGAsAFGRTENLDGIVAWSSRDR 173
Cdd:cd01347    81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTD--EFGGSVTAGYgsDNSGSSGGGGFDVSG-ALADDGAFGARLYGAYRDG 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 174 GDLRQSNGETAPNDEAINNMLAKGTWQIDSAQALSGLVRYYNNDAREPKNPQTVEASD-------SSNPMVDRSTIQRDA 246
Cdd:cd01347   158 DGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGsslgggpSSNTNGDRDWDYRDR 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 247 QLAYKLAPVGNDWLNADAKVYWSEVRINAQNTG------------------SSGEYREQTTKGAKLENRSTLFADSFASH 308
Cdd:cd01347   238 YRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGdplilnggnnaaggdlgrSGYSSERDTTQLGFDAGLNAPFGTGPVAH 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 309 LLTYGGEYYRQEQHpggattgfpqakIDFSSGWLQDEITLRDlPITLLGGTRYDSYRGSSDGY------KDVDADKWSSR 382
Cdd:cd01347   318 TLTLGVEYRREELD------------EKQTALYAQDTIELTD-DLTLTLGLRYDHYDQDSKDTiaggttAKKSYSHWSPS 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 383 AGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHfsigrfYTNYWVPNPNLRPETNETQEYGFGLRFDdlmlsnDALEF 462
Cdd:cd01347   385 LGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSH------GGTAAVGNPNLKPEKSKQYELGLKYDPG------DGLTL 452

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 463 KASYFDTKAKDYIST--TVDFAAATTMSYNVPNAKIWGWDVMTKYT-TDLFSLDV--AYNRTRGKDTD---TGEYISSIN 534
Cdd:cd01347   453 SAALFRIDIKNEIVStpTNTGLGLVTVYVNGGKARIRGVELEASYDlTDGLGLTGsyTYTDTEVKRTDgatTGNRLPGIP 532

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 535 PDTVTSTLNIPIAHSGFSVGWVGTFADRSTHVSSSYS---KQPGYGVNDFYVSYQGQqalKGMTTTLVLGNAFDKEYW-- 609
Cdd:cd01347   533 KHTANLGLDYELPDEGLTAGGGVRYRGKQYADTANGNntvKVPGYTLVDLSASYQFT---KNLTLRLGVNNLFDKDYYts 609

                         650       660
                  ....*....|....*....|....*.
gi 2564982303 610 ------SPQGIPQDGRNGKIFVSYQW 629
Cdd:cd01347   610 lsvrgsGLYGYYGPGRTYYLSVSYKF 635
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
 1-586 9.07e-89

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 287.91  E-value: 9.07e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGT-GRTNGQDVNMRGYDHRGVLILVDGVRQ-- 77
Cdd:COG4771    30 VVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSgGRGGSSGISIRGLGGDRVLVLIDGVPVnn 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  78 GTDTGHLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSsgfrvFGTGGTGDHSLGLGASAFG 157
Cdd:COG4771   110 PALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVS-----LGYGSNGNGTYSGSLSLGG 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 158 RTENLDGIVAWSSRDRGDLRQSNGETAPNDEAIN--NMLAKGTWQIDSAQALSGLVRYYNNDAREPKNPQTVEASDSSNP 235
Cdd:COG4771   185 PGDKLSFLLSGSYRDRDGYLDYRNGGFVGNSGYEryNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNA 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 236 MVDRSTIQR-DAQLAYKlapvGNDWLNADAKVYWSEVRINAQNTGSSGEY-----REQTTKGAKLENRSTLFADsfasHL 309
Cdd:COG4771   265 GDRDTTTDRgNYSLRYN----GDLGDNLDLSLYYSRTDRDSTNGSLGGSTgsfsdSDDTTYGLELDLTYPLGGN----HT 336

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 310 LTYGGEYYRQEQHPGGATTGfPQAKIDFSSGWLQDEITLRDlPITLLGGTRYDSYrgssDGYKDVDADKWSSRAGMTINP 389
Cdd:COG4771   337 LTLGAEYRYDDLDSSSFLGG-ADASRDTYGLFAQDEWKLTD-KLTLTAGLRYDYY----STFGASNYTAFSPRLGLRYDL 410

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 390 TNWLMLFGSYAQAFRAPTMGEMYNDSKHfsigrFYTNYWVPNPNLRPETNETQEYGFGLRFDdlmlsNDALEFKASYFDT 469
Cdd:COG4771   411 SDNLTLRASYGRGFRAPSLAELYGSGTG-----TPGRYVLGNPDLKPETSDNYELGLEYRLG-----NGGLSLSLTGFYT 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 470 KAKDYISTTVDFAAATTMSY--NVPNAKIWGWDVMTKYT-TDLFSLDVAYNRTRGK--DTDTGEYISSINPDTVTSTLNI 544
Cdd:COG4771   481 DIKDLIVLVPVGPGPGDVLQyeNVGKARTYGLELELKYRlGKGLTLTASYTYLDSKidDGDTGEPLPNVPPHKANLGLDY 560

                         570       580       590       600
                  ....*....|....*....|....*....|....*....|....
gi 2564982303 545 PIAHSGFSVGWV--GTFADRSTHVSSSYSKQPGYGVNDFYVSYQ 586
Cdd:COG4771   561 RLPKWWLLLLLTryYGGRYVTPPSGRLEGYTPGYTLLDLRASYK 604
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
1-621 3.05e-72

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 245.12  E-value: 3.05e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQdVNMRG--YDHRGVLILVDGVRQG 78
Cdd:COG1629     4 VVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQ-ISIRGfgGGGNRVLVLVDGVPLN 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  79 TDTGHLNGT-FLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDllqegqSSGFRVFGTGGTGDHsLGLGASAFG 157
Cdd:COG1629    83 DPSGGDGGLsYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKD------GKGGEVSASYGSYGT-YRASLSLSG 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 158 RTENLDGIVAWSSRDRGDLRQSNGETApndeaiNNMLAKGTWQIDSAQALSGLVRYYNNDAREP-------KNPQTVEAS 230
Cdd:COG1629   156 GNGKLAYRLSASYRDSDGYRDNSDSDR------YNLRAKLGYQLGDDTRLTLSASYSDSDQDSPgyltlaaLRPRGAMDD 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 231 DSSNPMVDRSTIQRD-AQLAYKLAPVGNDW-LNADAKVYWSEVRINAQNTGSSGEYREQTTKGAK-----LENRSTLFAD 303
Cdd:COG1629   230 GTNPYSNDTDDNTRDrYSLSLEYEHLGDGLkLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDnrtygLELRLTYDLG 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 304 SFASHLLTYGGEYYRQEQH-------------PGGATTGFPQAKIDFSSGWLQDEITLRDlPITLLGGTRYDSYR----- 365
Cdd:COG1629   310 FGGKHTLLVGLDYQRQDLDgsgypldlgsgslPTLTSGADDDGTTTSLALYAQDTYKLTD-KLTLTAGLRYDYVSydvdd 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 366 ---GSSDGYKDVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYndskhfsiGRFYTNYWVPNPNLRPETNETQ 442
Cdd:COG1629   389 tvtGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELY--------ANGTDPYSVGNPDLKPETSTNY 460

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 443 EygFGLRFDDLmlsNDALEFKASYFDTKAKDYISTTVDFAAATTMSY--NVPNAKIWGWDVMTKYT-TDLFSLDVAYNRT 519
Cdd:COG1629   461 E--LGLRYRLL---DGRLSLSLALFYSDVDNEILSVPLPNDSGFSTYytNAGKARSYGVELELSYQlTPGLSLNASYSYT 535

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 520 RGKDTD--------TGEYISSINPDTVTSTLNIpIAHSGFSVGWVGTFA-DRSTHVSSSYSKQPGYGVNDFYVSYQGQQA 590
Cdd:COG1629   536 DAKFDDdtdgsadlDGNRLPGVPPLTANLGLTY-EFPGGWSLGLGVRYVgDRYLDDANTQGAPGGYTLVDLGAGYRFGDN 614

                         650       660       670
                  ....*....|....*....|....*....|.
gi 2564982303 591 LkgmTTTLVLGNAFDKEYWSPQGIPQDGRNG 621
Cdd:COG1629   615 L---TLSLGVDNLFDKKYATSLSVRASNVRG 642
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
1-629 6.91e-40

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 155.47  E-value: 6.91e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSS-FEAPMMVSVIDTSAPENQTATSATDLLRHVPGITL---DGTGrtngQDVN--MRGYD---HRGVLIL 71
Cdd:COG4772    26 VVVTGSRAAEARlKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVqeeDGFG----LRPNigIRGLGprrSRGITLL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  72 VDGV-----RQGTDTGHLngtFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLqEGQSSGfrVFGTGGTGD 146
Cdd:COG4772   102 EDGIpiapaPYGDPAAYY---FPDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAF-GGELRV--TGGSFGYRR 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 147 HSLGLGasafGRTENLDGIVAwSSRDRGDlrqsnGETAPNDEAINNMLAKGTWQIDSAQALSGLVRYYNNDAREPkNPQT 226
Cdd:COG4772   176 THASVG----GTVGNFGYLVE-YSRKRGD-----GFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDANTP-GGLT 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 227 VEASDsSNPmvDRSTIQRD--------AQLAYKLAPvgNDWLNADAKVYWSEVRINAQ--------------NTGSSGEY 284
Cdd:COG4772   245 DAQFD-ADP--RQSYRPADqfdtrrtqLSLRYEHQL--SDNTTLTTTAYYNDFSRNWYirqntadpntpglgLRGNPRGY 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 285 REQTTKgAKLENRSTLFAdsfASHLLTYGGEYYRQEQH-------PGGATTGFP-QAKIDFS----SGWLQDEITLRDlP 352
Cdd:COG4772   320 RSYGIE-PRLTHRFELGG---VPHTLEVGLRYHREEEDrkqyvntYGQGRSGAGlRRDRRFSadalAAYAQNRFELTG-R 394

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 353 ITLLGGTRYDSYRGSSDGYKDVDA----------DKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSkhfsigr 422
Cdd:COG4772   395 LTLTPGLRYEHIRRDRTDRYSTRTggddsgsnsySEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGN------- 467

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 423 fytnywVPNPNLRPETNETQEygFGLRFDdlmlSNDALEFKASYFDTKAKDYISTTVDFAAATTMSYNVPNAKIWG---- 498
Cdd:COG4772   468 ------GGNPDLKPEKSWNYE--LGTRGR----IGNGLSAEVALFYIDYDNELGSCSAAGGDRSTFTNAGETRHQGlela 535

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 499 --WDVMtKYTTDLFSLDVAYNRTRgkdtdtGEYISSINPDTV----------TSTLNIPIAHSGFSVGWVGTFADR---- 562
Cdd:COG4772   536 ldYDLL-KGGGLGLPLFAAYTYTD------AEFTSDFGPVFAgnrlpyvprhQLTAGLGYEHGGWTANLNGRYVSEqftd 608

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2564982303 563 --STHVSSSYSKQPGYGVNDFYVSYqgqQALKGMTTTLVLGNAFDKEYWS------PQGI-PQDGRNgkIFVSYQW 629
Cdd:COG4772   609 aaNTVADGSFGKIPSYTVLDLSASY---DFGKNLSLFAGVNNLFDKRYIAsrapnyAAGIrPGPPRT--VYAGLRL 679
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
 1-629 1.47e-37

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 148.49  E-value: 1.47e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGrTNGQDVNMRGYDHRGVLILVDGVRQGTD 80
Cdd:PRK10064   33 MVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEG-DNRKGVSIRGLDSSYTLILIDGKRVNSR 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  81 TGHLNGTFLD----PA-LIKRVEIVRGPSALLYGSGALGGVIS----------YDTVDAKDLLQE----GQSSGFRVFGT 141
Cdd:PRK10064  112 NAVFRHNDFDlnwiPVdAIERIEVVRGPMSSLYGSDALGGVVNiitkkigqkwHGTVTVDTTIQEhrdrGDTYNGQFFTS 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 142 GGTGDHSLGLGA-SAFGRTENlDGIVAWSSRDRGDLRQSNGETApndeaiNNMLAKGTWQIDSAQALSGlvrYYNNDARE 220
Cdd:PRK10064  192 GPLIDGVLGMKAyGSLAKREK-DDPQNSTTTDTGETPRIEGFTS------RDGNVEFAWTPNQNHDFTA---GYGFDRQD 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 221 pknpqtvEASDSsnpmVDRSTIQRdaqLAYKLAPVGN-DWLNADAKVYWSevRINAQNTGSSGEYreqTTKGAKLENRST 299
Cdd:PRK10064  262 -------RDSDS----LDKNRLER---QNYSLSHNGRwDYGNSELKYYGE--KVENKNPGNSSPI---TSESNSIDGKYT 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 300 LFADSFAsHLLTYGGEYYRQEQHPGGATTGFPQAKIDFS--SGWLQDEITLRDlPITLLGGTRYDSYrgssdgykDVDAD 377
Cdd:PRK10064  323 LPLTAIN-QFLTFGGEWRHDKLSDAVNLTGGTSSKTSASqyALFVEDEWRIFE-PLALTTGVRMDDH--------ETYGD 392

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 378 KWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRfyTNYWVPNPNLRPETNETQEYGFGLRFDDLMLsn 457
Cdd:PRK10064  393 HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRG--ACKIVGSPDLKPETSESWELGLYYMGEEGWL-- 468

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 458 DALEFKASYFDTKAKDYI--STTVDFAAATTMS-------------------YNVPNAKIWGWDVMTKYT-TDLFSLDVA 515
Cdd:PRK10064  469 EGVESSVTVFRNDVDDRIsiSRTSDVNAAPGYQnfvgfetngrgrrvpvfryYNVNKARIQGVETELKIPfNDEWKLSLN 548

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 516 YNRTRGKDTDTGEY--ISSINPDTVTSTLN-IPIAHSGFSVGWVGTFADRSTHVSSSYSKQPGYGVNDFYVSYQGQQALK 592
Cdd:PRK10064  549 YTYNDGRDVSNGENkpLSDLPFHTANGTLDwKPLALEDWSFYVSGNYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVK 628

                         650       660       670
                  ....*....|....*....|....*....|....*...
gi 2564982303 593 GMTTTLVLGNA-FDKEYWSpqgIPQDGRNGKIFVSYQW 629
Cdd:PRK10064  629 LRAGVLNLGDKdLSRDDYS---YNEDGRRYFMAVDYRF 663
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
14-629 2.58e-36

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 144.25  E-value: 2.58e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  14 EAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVlILVDGVRQGtdtghlNGTFLDPAL 93
Cdd:COG4774     8 DTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGFSASGD-IYVDGLRDP------GQYRRDTFN 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  94 IKRVEIVRGPSALLYGSGALGGVISYDTVDAKDllqegqSSGFRVFGTGGTGDHslgLGASA-FGRTenLDGIVAWssrd 172
Cdd:COG4774    81 LERVEVLKGPASVLYGRGSPGGVINLVTKRPTD------EPFTEVTLTYGSDGQ---RRATLdVNGP--LGDDLAY---- 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 173 RGDLRQSNGETAPNDEAINNMLAKG--TWQIDSAQALSGLVRYYNND--------AREPKNPQTVEASDSSNPMVDRSTI 242
Cdd:COG4774   146 RLNGMYRDSDSYRDGVDNDRWGIAPslTWRLGDRTRLTLDYEYQDDDrtpdygvpAVANGRPVDVDRSTFYGQPDDYSDS 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 243 QRD---AQLAYKLapvgNDWLNADAKVYWSEVRINAQNTGSSGE-----------YREQTTKGakLENRSTL---FADSF 305
Cdd:COG4774   226 ETDsatLRLEHDF----NDNWTLRNALRYSDYDRDYRNTYPTGGnatgtvtrsayRRDQDNDT--LSNQTDLtgkFDTGG 299

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 306 ASHLLTYGGEYYRQEQH-------------------PGGATTGFP------QAKIDFSSGWLQDEITLRDlPITLLGGTR 360
Cdd:COG4774   300 VKHTLLAGVEYSREDSDnarysgggtaptvnlynpvYGAPVTGPTlggadnDSRTDTTGLYLQDTISLTD-RWSLLAGLR 378

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 361 YDSYRGSSDGYK------DVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSkhfsigrfytnywvpNPNL 434
Cdd:COG4774   379 YDRFDTDYTDRTtgattsSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLSNA---------------GQAL 443

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 435 RPETNETQEygFGLRFDdlmLSNDALEFKASYFDTKAKDYISTTvdfAAATTMSYNVPNAKIWG--WDVMTKYTTDLfSL 512
Cdd:COG4774   444 DPEKSRQYE--VGVKWD---LLDGRLSLTAALFRIEKTNVRTTD---PANPGVYVQTGEQRSRGveLEATGELTPGW-SV 514

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 513 DVAYNRTRGKDTDTGeyissiNPDTVTSTL-NIP-----------IAHSGFSVGwVGTfadrsTHVSSSYSKQ------P 574
Cdd:COG4774   515 LAGYTYLDAEITKSA------NAANVGNRLpNVPrhsaslwttydLPLPGLTLG-GGV-----RYVGSRYADAantvklP 582

                         650       660       670       680       690       700
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 575 GYGVNDFYVSYQGQqalKGMTTTLVLGNAFDKEYW-----SPQGIPQDGRNGKIFVSYQW 629
Cdd:COG4774   583 SYTRFDAGASYRLN---KNLTLRLNVNNLTDKRYYasaygSGYVTPGAPRTVLLSASYRF 639
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
 2-629 5.99e-36

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 143.88  E-value: 5.99e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   2 TVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDhrGVLILVDGVRQGTdt 81
Cdd:COG4773    52 SSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGGRDSFSIRGFS--IDNYLRDGLPLGG-- 127

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  82 ghLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTvdaKDLLQEGQSSGfrvfgTGGTGDHSLGLGASAFGRTEN 161
Cdd:COG4773   128 --FGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVT---KRPTAEPQGEV-----SLSAGSWDTYRATADVGGPLN 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 162 LDGIVAWssrdRGDLRQSNGETAPNDEAINNMLAKG--TWQIDSAQALSGLVRYYNNDARepkNPQTVEASDSSNPMVDR 239
Cdd:COG4773   198 EDGTLRY----RLNAAYEDGDSFRDGVDNRRTLIAPslDWDLTDDTTLTLGAEYQDDDST---GDRGFLPLDGTLLDLPR 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 240 ST--------IQRD-----AQLAYKLapvgNDWLNADAKVYWSEVRINAQNTGSSGEYREQTTK-----GAKLENRSTLF 301
Cdd:COG4773   271 STnlgepwdyYDTEtttlfAELEHRF----NDDWSLRANARYSDSDRDGRSAYAYGAPDAATGTltryaSARDGDSRSDS 346

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 302 ADSFAS---------HLLTYGGEYYRQEQHPGGATTG--------------------FPQAKIDFSSGWLQDEITLRDlP 352
Cdd:COG4773   347 LDANLNgkfetggleHTLLVGADYSRYDSDSDSATAGtiniynpvygnlpepdfdasDTDTTTRQTGLYAQDQISLTD-R 425

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 353 ITLLGGTRYDSYRGSSDGYK-----DVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTmgemyndskhfsiGRFYTNy 427
Cdd:COG4773   426 LSLLLGGRYDWYETDSTNRLggsttSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQS-------------GADNNG- 491

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 428 wvpNPnLRPETNETQEygFGLRFDdlmLSNDALEFKASYFDTKaKDYISTTVdfAAATTMSYNVPNAKIWGWDVMTKYT- 506
Cdd:COG4773   492 ---NP-LDPETGKQYE--AGVKGE---LFDGRLNATLAVFDIT-QKNVATTD--PDNPNFYVQVGEVRSRGVELELSGEl 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 507 TDLFSLDVAYNRTRGKDT-DTGEYISSINPDTVTSTLNI-------PIAHSGFSVGWVGTFADRSTHVSSSYSKQPGYGV 578
Cdd:COG4773   560 TPGLNLIAGYTYTDAKITkDADALEGKRLTNVPRHTASLwttyrfpSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTL 639

                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2564982303 579 NDFYVSYqgqQALKGMTTTLVLGNAFDKEYWSPQG-----IPQDGRNGKIFVSYQW 629
Cdd:COG4773   640 VDAGARY---DLGKNWTLQLNVNNLFDKKYYASSGsrgyvYYGAPRNVRLSLSYKF 692
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 274-628 7.40e-32

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 129.12  E-value: 7.40e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 274 NAQNTGSSGEYREQTTKGAKLENRSTLFADSFASHLLTYGGEYYRQEQH--------PGGATTGFPQAKIDFSSGWLQDE 345
Cdd:pfam00593 103 GAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDdaydpydpANPSSSSYSDTTTDSYGLYLQDN 182

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 346 ITLRDlPITLLGGTRYDSYRGSSDGYK------DVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFS 419
Cdd:pfam00593 183 IKLTD-RLTLTLGLRYDHYSTDGDDGNgggdnfSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGG 261

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 420 IGrfytNYWVPNPNLRPETNETQEygFGLRFDDlmlsnDALEFKASYFDTKAKDYI---STTVDFAAATTMSYNVPNAKI 496
Cdd:pfam00593 262 GG----AVAGGNPDLKPETSDNYE--LGLKYDD-----GRLSLSLALFYIDIKNLItsdPDGPGLGGTVYTYTNVGKARI 330

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 497 WGWDV---MTKYTTDLFSLDVAYNRTRGKDT--DTGEYISSINPDTVTSTLNIPIAHSGFSVGWVGTFADRSTHVSSSYS 571
Cdd:pfam00593 331 RGVELelsGRLWGLGLSGGGYTYTDADDDADadDTGNPLPNVPRHTANLGLTYDFPLGGWGARLGARYVGSGERRYGDAA 410

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2564982303 572 ---KQPGYGVNDFYVSYQGQqalKGMTTTLVLGNAFDKEYW--------SPQGIPQDGRNGKIFVSYQ 628
Cdd:pfam00593 411 ntfKTPGYTLVDLSAGYRLN---KNLTLRLGVNNLFDKYYKryyssgggNLGGYPGPGRTFYLGLSYK 475
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
1-219 1.75e-30

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 120.75  E-value: 1.75e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGR-TNGQDVNMRGYDHRGVLILVDGVRQ-G 78
Cdd:COG4206     1 VVVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGpGSAASISIRGLGSNQTLVLIDGVPLnD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  79 TDTGHLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDllqeGQSSGFRV-FGTGGTGDHSLGLGasafG 157
Cdd:COG4206    81 PSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKK----GFKGSVSAsYGSFGTRRLSASLS----G 152

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2564982303 158 RTENLDGIVAWSSRDRGDLRQSNGETAPNDEA-INNMLAKGTWQIDSAQALSGLVRYYNNDAR 219
Cdd:COG4206   153 GAGKFSYSLSASYRRSDGYRYNDPDLRNNDGYeNTSLNARLGYKLGDNGSLSLSGGYSDSERG 215
PRK13484 PRK13484
IreA family TonB-dependent siderophore receptor;
1-505 2.62e-30

IreA family TonB-dependent siderophore receptor;


Pssm-ID: 139605 [Multi-domain]  Cd Length: 682  Bit Score: 126.66  E-value: 2.62e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLdgTGRTNGQDVNMRGYDHRGVLILVDGVRQGTD 80
Cdd:PRK13484   33 LVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISI--TGGNEKPDISIRGLSGDYTLILVDGRRQSGR 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  81 TGHLNGT------FLDPA-LIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGqssgfrVFGTGGTGDHSLGLGA 153
Cdd:PRK13484  111 ESRPNGSggfeagFIPPVeAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNNQTWDG------VLGLGGIIQEHGKFGN 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 154 SAFGR-------TENLDGIVAW-SSRDRGDLRQSNGETAPNDEAINnmlakGTWQIDSAQALSGLVRYYNNDAREPKNP- 224
Cdd:PRK13484  185 STTNDfylsgplIKDKLGLQLYgGMNYRKEDSISQGTPAKDNKNIT-----ATLQFTPTESQKFVFEYGKNNQVHTLTPg 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 225 QTVEA------SDSSNPMVDRSTIQRDAQLAYKlapVGNDWLNADAKVYWSEVrINAQNTGSSGEYREQTTK--GAKLEN 296
Cdd:PRK13484  260 ESLDAwtmrgnLKQPNSKRETHNSRSHWVAAWN---AQGEILHPEIAVYQEKV-IREVKSGKKDKYNHWDLNyeSRKPEI 335

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 297 RSTLFADSFASHL----LTYGGEY----YRQEQHPGGATTGFPQAKIDFSSGWLQDEITLRDlPITLLGGTRYDSYrgss 368
Cdd:PRK13484  336 TNTIIDAKVTAFLpenvLTIGGQFqhaeLRDDSATGKKTTETQSVSIKQKAVFIENEYAATD-SLALTGGLRLDNH---- 410

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 369 dgykDVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEM---YNDSKHFSIGRFYTNYwvpnpNLRPETNETQEYG 445
Cdd:PRK13484  411 ----EIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVspgFGTLTQGGASIMYGNR-----DLKPETSVTEEIG 481

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2564982303 446 FGLRFDDLMLSNdalefkASYFDTKAKD----YISTTVD-FAAATTMSY-NVPNAKIWGWDVMTKY 505
Cdd:PRK13484  482 IIYSNDSGFSAS------ATLFNTDFKNkltsYDIGTKDpVTGLNTFIYdNVGEANIRGVELATQI 541
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 14-610 6.28e-29

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 122.14  E-value: 6.28e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  14 EAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGT-GRTNGQDVNMRGYDHRGVL--ILVDGVRQGTDTGHLNgtfLD 90
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSgGTTQFGNITIRGFGLEVDIdnVYLDGVPLLSRGNLAI---VD 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  91 PALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSSGFRVFGT-GGTGDHSLGLGASafgrtENLDGIVAWS 169
Cdd:TIGR01783  78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGyRTAFDLGGPLGAD-----GTFRGRLNGA 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 170 SRDRGDLRQSNGetapndEAINNMLAKGTWQIDSAQALSGLVRYYNNDAREP-------------KNPQTVEASDSSNPM 236
Cdd:TIGR01783 153 RQDGDSFYDGAG------EETRLGATATDWQLDDRTLLRLGAYYQKERDRGGygglpasggtsgrDLSSDRYLGTSSNRN 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 237 VDRSTIQRDAQLAYKLapVGNDWlNADAKVYWSEVRINAQNTGSSGEYREQTTKGAKLENRSTL-------------FAD 303
Cdd:TIGR01783 227 YDDREYLSYGLSLEYQ--FNDVW-TGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKqdrvqidagldgeFET 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 304 SFASHLLTYGGEYYRQ----------EQHPGGATTGFPQA---------------KIDFSSGWLQDEITLRDlPITLLGG 358
Cdd:TIGR01783 304 GPIEHDLLLGVSYGQRttnrfnntgyPSDNIYSLTATSSArtdigdspkdralssTTKALNGVALQRILLAD-KWTLTLG 382

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 359 TRYDSYR-GSSDGY----KDVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPtmgemyndskhFSIGRFYTNywvPNPN 433
Cdd:TIGR01783 383 GRYDSVDvKSNNGVagstGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPG-----------GYYPKGAGN---SGDI 448

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 434 LRPETNETQEygFGLRFDDlmlsNDALEFKASYFDTKAKDYIstTVDFAAATTmSYNVPNAKIWGWDVMTKYT-TDLFSL 512
Cdd:TIGR01783 449 LEPEKGKNYE--LGVRYDL----GDSLLATAALFRITKDNQL--VQDPVNGTF-SVNAGKTRNRGVELEARGYlTPGLSL 519

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 513 D--VAYNRTRGKDTDTGEY------ISSINPDTVTSTLNIPIAHSGFSVGWVGTFADRSTHVSSSYSKQPGYGVNDFYVS 584
Cdd:TIGR01783 520 SagYTYTDAEFTEDTNGDTqgntvpFVPKHTASLWASYAPPVGDNGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVR 599

                         650       660
                  ....*....|....*....|....*.
gi 2564982303 585 YQgQQALKGMTTTLVLGNAFDKEYWS 610
Cdd:TIGR01783 600 YD-LTKKKNLTLALNVNNLFDRDYYT 624
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
 14-116 1.25e-28

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 110.05  E-value: 1.25e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  14 EAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVLILVDGVRQGT-DTGHLNGTFLDPA 92
Cdd:pfam07715   4 DTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGGSSISIRGFGSNRVLVLVDGVPLNSgGGGSVDLNSIDPE 83

                          90       100
                  ....*....|....*....|....
gi 2564982303  93 LIKRVEIVRGPSALLYGSGALGGV 116
Cdd:pfam07715  84 DIERVEVLKGPASALYGSGAIGGV 107
PRK13486 PRK13486
TonB-dependent receptor;
1-571 1.50e-28

TonB-dependent receptor;


Pssm-ID: 139606 [Multi-domain]  Cd Length: 696  Bit Score: 121.28  E-value: 1.50e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLD-GTGRTNGQDVNMRGYDHRGVLILVDGVRQG- 78
Cdd:PRK13486   28 MIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVEsGTGKTGGLEISIRGMPASYTLILIDGVRQGg 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  79 ----TDTGH--LNGTFLDP-ALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDL----------LQE----GQSSGFR 137
Cdd:PRK13486  108 ssdvTPNGFsaMNTGFMPPlAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKwlssvnaglnLQEsnkwGNSSQFN 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 138 VFGTGGTGDHSLGLGASafGRTENLDGIVAWSSRDRGDLRQSngetAPNDEAINNMLAKGTWQIDSAQAL-----SGLVR 212
Cdd:PRK13486  188 FWSSGPLVDDSVSLQVR--GSTQQRQGSSVTSLSDTAATRIP----YPTESQNYNLGARLDWKASEQDVLwfdmdTTRQR 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 213 YYNNDARepknPQTVEASDSSNPMVDRSTIqrdaQLAYKLAPVGNDWlnaDAKVYWSEVR----------INAQNTGSSG 282
Cdd:PRK13486  262 YDNRDGQ----LGSLTGGYDRTLRYERNKI----SAGYDHTFTFGTW---KSYLNWNETEnkgrelvrsvLKRDKWGLAG 330

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 283 EYREqtTKGAKLENRSTLFADSFASHLLTYGGEYYRQEQHPGG--ATTG--FPQAKIdfsSGWLQDEITLRDlPITLLGG 358
Cdd:PRK13486  331 QPRE--LKESNLILNSLLLTPLGESHLVTVGGEFQSSSMKDGVvlASTGetFRQKSW---SVFAEDEWHLTD-ALALTAG 404

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 359 TRYDSYrgssdgykDVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSiGRFYTNYwVPNPNLRPEt 438
Cdd:PRK13486  405 SRYEHH--------EQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISGVS-GQGKTNL-LGNPDLKPE- 473

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 439 nETQEYGFGLRFDDLMLSNDALEFKASYFDTKAkdyISTTVDfaaATTMSY-NVPNAKIWGWDVMTK---YTTDL-FSLD 513
Cdd:PRK13486  474 -ESVSYEAGVYYDNPAGLNANVTGFMTDFSNKI---VSYSIN---DNTNSYvNSGKARLHGVEFAGTlplWSEDVtLSLN 546

                         570       580       590       600       610       620
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 514 VAYNRTRGKDTDT-GEYISSINPDTVTSTLNIPIAHSGFSvgWVGT-FADRSTHVSSSYS 571
Cdd:PRK13486  547 YTWTRSEQRDGDNkGAPLSYTPEHMVNAKLNWQITEEVAS--WLGArYRGKTPRFTQNYS 604
PRK13483 PRK13483
ligand-gated channel protein;
1-619 1.79e-28

ligand-gated channel protein;


Pssm-ID: 184080 [Multi-domain]  Cd Length: 660  Bit Score: 120.65  E-value: 1.79e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGrtNGQDVNMRGYDHRGVLILVDGVRQGT- 79
Cdd:PRK13483   36 VVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVVVTGGG--DRTDISLRGMGSQYTLILVDGKRQSSr 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  80 ------DTGHLNGTFLDP-ALIKRVEIVRGPSALLYGSGALGGVISYDT----------VDAKDLLQEGQSSG----FRV 138
Cdd:PRK13483  114 etrpnsDGPGVEQAWTPPlAAIERIEVIRGPMSSLYGSDAIGGVINIITrkvpnewqgeVRLDTTLQENSDSGnvyqANF 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 139 FGTGGTGDHSLGLGASAFGRTENLDGIVAwSSRDRgDLRQSNGETA--PNDEAiNNMLAKGTwqidSAQALSGLV-RYYN 215
Cdd:PRK13483  194 FVNGPLIKDLLGLQLYGQYTQREEDDIEG-GYRDK-DARSLTAKLAltPNEDH-DIMLEVGT----SNQERDSTVgKTVA 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 216 NDAREPKNPQTVEASDSSNPMvDRSTiqrdaqlaYKLAPVGnDWLNADAKVYwsevrinAQNTGSSGEYREQTTKgaKLE 295
Cdd:PRK13483  267 PLAPGESCGRRGCPESSTTEY-ERST--------VSLSHTG-RWDFGTSDTY-------IQHEEFDNKSREMKIK--NTD 327

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 296 NRSTLFADSFASHLLTYGGEYYRQE--QHPGGATTGFPQAKIDFSSGWLQDEITLRDlPITLLGGTRYDsyrgssdgYKD 373
Cdd:PRK13483  328 FQSSLVAPLGQEHTLTFGAAYNHQDltDETSNQISDLTDISRTQWAVFSEDEWRIAD-DFALTGGLRLD--------HDE 398

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 374 VDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSI-GRFYTnywvpNPNLRPETNETQEygFGLRFDd 452
Cdd:PRK13483  399 NFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTTPDWGQVSRgGNIYG-----NPDLKPETSLNKE--LGLYYD- 470

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 453 lmlSNDALEFKASYFDTKAKDYISTTV-----------DFAAATTMSYNVPNAKIWGWDVMTKYT-TDLFSLDVAYNRTR 520
Cdd:PRK13483  471 ---LGSGLTASLTVFYNEFKDKITRVAcpatqctdgpnQFGADPTTYVNIDEAVTQGVEASLSYPiTSTLSLSGNYTYTD 547

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 521 gKDTDTGEY----ISSINPDTVTSTLN-IPIA--HSGFSVGWVGTFADRSTHVSSSYSKQPGYGVNDFYVSYQgqqalkg 593
Cdd:PRK13483  548 -SEQKSGAYkgspLNQLPKHLFQASLNwEPTDrlNSWARVNYRGEESQPTTGPSSSSFIAPSYTFLDLGANYQ------- 619

                         650       660       670
                  ....*....|....*....|....*....|.
gi 2564982303 594 MTTTLVLG----NAFDKEY-WSPQGIPQDGR 619
Cdd:PRK13483  620 LTDNLKLSagiyNLFDKEInYEEYGYVEDGR 650
TonB-B12 TIGR01779
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ...
 1-628 2.91e-24

TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]


Pssm-ID: 273802 [Multi-domain]  Cd Length: 614  Bit Score: 107.64  E-value: 2.91e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPmmVSVIDTSAPENQTATSATDLLRHVPGITL-DGTGRTNGQDVNMRGYDHRGVLILVDGVRQGT 79
Cdd:TIGR01779  33 VTANRFAQTASQTLAP--VTIITRQDIERTQAKSLPELLRRLPGVSIaQNGGRGQNTSLFLRGTESDHVLVLIDGIRFGS 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  80 DT-GHLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSSGfrvFGTGGTGDHSLGLGASAFGR 158
Cdd:TIGR01779 111 AAaGAADFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGTTLSAG---LGSLDYQEYSIASGVAIGEN 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 159 TENLDGIVAWSSRDRGDLRQSNGETAPNDEAINN--MLAKGTWQIDSAQALSGLVRYYNN----DAREPKNPQTVEASDS 232
Cdd:TIGR01779 188 GWYSVALGTESTKGINVRPGGPGVYDPDRDGFRSdsLLLGGGHRFDESWSLFVNALRYENrndyDNYSFGTRLYKEAEKG 267

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 233 SnpmvdrstiqrdaqlayklapvgndwLNADAKVYWSEVRINAQ---NTGSSGEYREQTTKGAKLENRSTLFADSFA--- 306
Cdd:TIGR01779 268 D--------------------------QSFTGGRQRQSERDVSEltlSTGKSKDWDYAYSKGRYSSTSDTREQRNIQwqn 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 307 ------SHLLTYGGEYYRQEQHPGGATTGFPQAKIDFSSGWLQdEITLRDLPITLlggtRYDSyrGSSDGYKDVdadkWS 380
Cdd:TIGR01779 322 dllvgdGWVLAGGVDWQKDSIISSTADKEDDRSNTAAFAQVLQ-QWGQQLLEASL----RRDD--NQQFGSHTT----GS 390

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 381 SRAGMTINPTnwLMLFGSYAQAFRAPTMGEMYndskhfsigrfYTNYwvPNPNLRPETNETQEYGFGLRFddlmlsnDAL 460
Cdd:TIGR01779 391 IAWGYQFIEE--LRFTASYGTAFKAPNLNQLY-----------YPSY--GNPNLQPETSKSAELGFYGLF-------SGG 448

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 461 EFKASYFDTKAKDYIsttvDFAAATTMSYNVPN-AKIWGWDVMTKYTTDLFSLDVAYNRTRGKDTDTGEYIssinPDTVT 539
Cdd:TIGR01779 449 KWSISGYRTKINDLI----DYDSHPKGYPNNIGeARIKGVEATAEFATGGWTHQLSVDLLDAQNVNTGNTL----PRRAR 520

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 540 STLNIPIAHSGFSVGWVGTFADRSTHVSSSYSKQP-------GYGVNDFYVSYQGQQALkgmTTTLVLGNAFDKEYWSPQ 612
Cdd:TIGR01779 521 QMYKWNADRAFEQFDWGASYQYVGKRYDDDYNTYPtqnvrlgGYSLLDLRVSYYVTDSW---TVQGRIANLFDKDYETAY 597

                         650
                  ....*....|....*.
gi 2564982303 613 GIPQDGRNGKIFVSYQ 628
Cdd:TIGR01779 598 GYPQAGRAYYLSIRYQ 613
PRK13513 PRK13513
ligand-gated channel protein;
1-476 1.16e-21

ligand-gated channel protein;


Pssm-ID: 184104 [Multi-domain]  Cd Length: 659  Bit Score: 99.46  E-value: 1.16e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNgqDVNMRGYDHRGVLILVDGVRQGT- 79
Cdd:PRK13513   38 MVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVTGGGSTS--DISIRGMAAKYTLILVDGKRVDTr 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  80 ------DTGHLNGTFLDP-ALIKRVEIVRGPSALLYGSGALGGVISYDT----------VDAKDLLQEGQSSG----FRV 138
Cdd:PRK13513  116 strpnsDGSGIEQGWLPPlAAIERIEVVRGPMSSLYGSDAMGGVINIITrkvqkewhgsLRADATLQEDSKSGdifqTNA 195

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 139 FGTGGTGDHSLGLGASAFGRTENLDGIVawssrdrgdlrqsNGEtapNDEAINNMLAKGTWQIDSAQALSGLVRYYNNDa 218
Cdd:PRK13513  196 YASGPLIDGLLGLKVSGLLSHRSEDKII-------------DGY---NEQRMRNGTATFSLTPDDNNEFDFEIGRYVQD- 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 219 REpknpQTVEASDSSNPMVDRSTIQRDaqlAYKLAPVGN-DWLNADAKVYWSEVRinaqNTGssgeyREQTTKGAKLENR 297
Cdd:PRK13513  259 RN----STPGRTLALNGTNSDTQYDRN---NYAITHNGYyDFGNSTSYIQRDETR----NPS-----RQMKSVDTIFNTQ 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 298 STLFadsFASHLLTYGGEYYRQEQHPGGatTGFPQAK-IDFSSGW-----LQDEITLRDlPITLLGGTRYDsyrgssdgy 371
Cdd:PRK13513  323 TSFL---LDDHTLSLGGQYRYEELYDKG--NQLPSASdLNKLTRWswalfAEDEWQMTN-DFALTGGIRMD--------- 387

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 372 KDVD-ADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRFYTNYWVPNPNLRPETNETQEygFGLRF 450
Cdd:PRK13513  388 QDQNyGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQATDNWGQLTGGGGLPALILGNSDLKPEKSISQE--IGILW 465

                         490       500
                  ....*....|....*....|....*.
gi 2564982303 451 DDlmlsNDALEFKASYFDTKAKDYIS 476
Cdd:PRK13513  466 DN----QENLNASVTLFNTDFKDKIT 487
PRK13528 PRK13528
outer membrane receptor FepA; Provisional
 36-543 4.57e-14

outer membrane receptor FepA; Provisional


Pssm-ID: 237413 [Multi-domain]  Cd Length: 727  Bit Score: 75.56  E-value: 4.57e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  36 TDLLRHVPGITLDG---TG-RTNGQDVNMRGYDHRGVLILVDG--------VRQG----TDT-GHLNgtFLDPALIKRVE 98
Cdd:PRK13528   71 SDIIRKMPGVNLTGnsaSGtRGNNRQIDIRGMGPENTLILIDGvpvtsrnsVRYSwrgeRDTrGDTN--WVPPEMVERIE 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  99 IVRGPSALLYGSGALGGVISYDTVDAKDLL--------------QEGQS--SGFRVFGTgGTGDhslGLGASAFGRTENL 162
Cdd:PRK13528  149 VIRGPAAARYGSGAAGGVVNIITKRPTNDWhgslslytnqpessKEGATrrANFSLSGP-LAGD---ALTMRLYGNLNKT 224

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 163 DGivawssrDRGDLRQSNGETAP------NDEAINNMLAkgtWQIDSAQAL---SGLVRYYNNDAREPKNPQTveaSDSS 233
Cdd:PRK13528  225 DA-------DSWDINSSAGTKNAagregvRNKDINGVLS---WKMTPQQILdfeAGYSRQGNIYAGDTQNSNS---SAVT 291

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 234 NPMVDR-STIQRDAQLAYKLAPVGN-DWLNADAKVYWSEVRINAQNTGSSG--EYR---EQTTKGAKLENRST-----LF 301
Cdd:PRK13528  292 ESLAKSgKETNRLYRQNYGLTHNGIwDWGQSRLGFYYEKTNNTRMNEGLAGggEGRitaDQTFTTSRLESYRTsgelnVP 371

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 302 ADSFASHLLTYGGEYYRQEQH-----------------PGGATTGFPQAKIDFSSGWLQDEITLRDlPITLLGGTRYDsy 364
Cdd:PRK13528  372 LNWLFEQTLTVGAEWNRDELNdpsstsltvkdgdiggiSGSAADRSSKNKSEISALYVEDNIEPVP-GTNLIPGLRFD-- 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 365 rgssdgYKDVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTmgeMYNDSKHFsigRFYTN-------------YWVPN 431
Cdd:PRK13528  449 ------YHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAPN---LYQSSEGY---LLYSRgngcpkditsggcYLVGN 516

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 432 PNLRPETNETQEYGFGLRFDDLMLSndalefkASYFDTKAKDYI-STTVDFAAATTMSY-----NVPNAKIWGWD--VMT 503
Cdd:PRK13528  517 KNLDPEISVNKEIGLEFTVDDYHAS-------VTYFRNDYQNKIvAGDDVIGRTASGAYilqwqNGGKAVVEGLEgnLLV 589

                         570       580       590       600
                  ....*....|....*....|....*....|....*....|...
gi 2564982303 504 KYTTDlfSLDVAYNRT---RGKDTDTGEYISSINPDTVTSTLN 543
Cdd:PRK13528  590 PLMKD--RLNWNTNATymiTSEQKDTGNPLSVIPKYTINSTLD 630
btuB PRK10641
TonB-dependent vitamin B12 receptor BtuB;
1-608 2.33e-12

TonB-dependent vitamin B12 receptor BtuB;


Pssm-ID: 236730 [Multi-domain]  Cd Length: 614  Bit Score: 70.02  E-value: 2.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTAT--GNARSSFEAPMmvSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTnGQDVNM--RGYDHRGVLILVDGVR 76
Cdd:PRK10641   28 LVVTANrfQQPVSTVLAPT--TVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGL-GQLSSLfiRGTNSSHVLVLIDGVR 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  77 --QGTDTGHLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKD--LLQEG-QSSGFRVFGtGGT----GDH 147
Cdd:PRK10641  105 lnQAGISGSADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPgtTLSAGwGSNGYQNYD-GSTqqqlGDN 183

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 148 SLGLGASAFGRTENLDgIVAWSSrdRGDLRQSNgetapNDEAINNMLAKGTWQIDSAQaLSGLVRYYNNDAREPKNPQtv 227
Cdd:PRK10641  184 TRVTLAGDYTYTKGFD-VVAYGN--TGTQAQPD-----RDGFMSKTLWGGLEHQFNDQ-WSGFVRGYGYDNRTDYDAY-- 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 228 eaSDSSNPMVD-RSTIQR--DAQLAYKlapvgndwlnadAKVYWSEV-----RINAQNTGSS-GEYREQTTKGaKLENRS 298
Cdd:PRK10641  253 --YSPGSPLIDtRQLYSQswDAGLRYN------------GGIYSSQLiasysHSKDYNYDPHyGRYDSSATLD-DMKQYN 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 299 TLFADSFA-SHLLTYGGEYYRQEqhpggattgfpqaKIDFSSGWLQDEITLRDLPITLLGGTRYDSY--RGSSDGYKDVD 375
Cdd:PRK10641  318 VQWGNTVQvGHGNISAGVDWQKQ-------------TTTPGTGYVPDGYDQRNTGIYLTGQQQIGDVtlEGAARSDDNSQ 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 376 ADK---WSSRAGmtinptnW-----LMLFGSYAQAFRAPTMGEMYndskhfsiGRFytnywvPNPNLRPETNETQEYGF- 446
Cdd:PRK10641  385 FGWhgtWQTSAG-------WefidgYRFIASYGTAFKAPNLGQLY--------GFY------GNPNLKPEESKQWEGGFe 443

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 447 GLrfddlmlsNDALEFKASYFDTKakdyISTTVDFAAATTMSYNVPNAKIWGWDVMTKYTTDLFSLDVAYNRTRGKDTDT 526
Cdd:PRK10641  444 GL--------TGPVNWRLSGYRND----IDNLIDYDDHTLKYYNVGKATIKGVEWTGNFDTGPLTHQVTLDYVDPRNAIT 511

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 527 GEYISSINPDTVTSTLNIPIAHSGFSVGW--VGTFADRSTHVSSSYS-KQPGYGVNDFYVSYQGQQALkgmTTTLVLGNA 603
Cdd:PRK10641  512 DEPLARRAKQQVKYQLDWQLYDFDWGVTYqyLGTRYDKDYSTYPYQTvKLGGVSLWDLAVSYPVTSHL---TVRGKIANL 588


                  ....*
gi 2564982303 604 FDKEY 608
Cdd:PRK10641  589 FDKDY 593
PRK13524 PRK13524
FepA family TonB-dependent siderophore receptor;
1-117 1.00e-10

FepA family TonB-dependent siderophore receptor;


Pssm-ID: 237410 [Multi-domain]  Cd Length: 744  Bit Score: 64.67  E-value: 1.00e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   1 MTVTAtgnARSSFEAPMmVSVIDTSAPE-NQTATSATDLLRHVPGITLDGTGrTNGQDVNMRGYDHRGV-----LILVDG 74
Cdd:PRK13524   41 IVVTA---AEQNLQAPG-VSTITAEDIRkRPPANDVSEIIRTMPGVNLTGNS-TSGQRGNNRQIDIRGMgpentLILIDG 115

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2564982303  75 --------VRQG----TDT-GHLNgtFLDPALIKRVEIVRGPSALLYGSGALGGVI 117
Cdd:PRK13524  116 kpvssrnsVRYGwrgeRDTrGDTN--WVPPEMIERIEVLRGPAAARYGNGAAGGVV 169
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
 14-533 1.56e-07

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 54.52  E-value: 1.56e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  14 EAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDV-NMRGYDHRGVLILVDGVRQGTDTGHLNGTflDPA 92
Cdd:PRK14049   78 ETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVGAFGFDPRFDAfFVRGFDVTYTGVFRDNLRQPGASSSIFKT--EPY 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  93 LIKRVEIVRGPSALLYGSGALGGVISYDTVDAKD-LLQEGQSSgfrvfgtggTGDHSLGLGASAFGRTENLDGIVAWssR 171
Cdd:PRK14049  156 GLEGVSILRGPSSALYGASGAGGLFNLITKRPTEePLREVQVQ---------YGTNNRYQGQFDFSGPVNETDPVYY--R 224

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 172 DRGDLRQSNGE--TAPNDEAinnMLAKG-TWQIDSAQALS-----------GLVRYYNndarepkNPQTVEASD--SSNP 235
Cdd:PRK14049  225 LTGLLRDADTEqvGVPDDRA---YIAPAfTWKPDEDTRLTvlgeysrtktgGTAAYYN-------DPLTGEVTDifAGNP 294

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 236 MVDRSTiQRDAQLAYKLAPVGNDWLnadakVYWSEVRINAQNTG-------------------SSGEYREQTTKGAKLEN 296
Cdd:PRK14049  295 AFNDSV-QKQGRIGYEFEHRLNDTF-----VFRQNARVSTLNIDadwafayapnaadptlldsSAGTYDERLTAFVIDNQ 368

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 297 RSTLFADSFASHLLTYGGEY------------YRQEQHPGGATTGFPQAKIDFSSGWLQDE----ITLRDL----PITLL 356
Cdd:PRK14049  369 LEAKFDTGAFEHTLLAGVDYtklrfralngrgVSPPLDTKNPTQGRPVAAIDFSTRTVQDQwqlgTYLQDQirydAWTLT 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 357 GGTRYD-------SYRGSSDGYKDVD-ADK-WSSRAGMTINpTNW-LMLFGSYAQAFrAPTMGemyndskhfsIGRfytn 426
Cdd:PRK14049  449 AGGRYDwvstdtdTTDLATDSLTTVSqKDKeFSGRIGLTYE-TDFgLAPYISYSTAF-SPNAG----------FNR---- 512

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303 427 ywVPNPNLRPETNETQEYGFglrfdDLMLSNDALEFKASYFDTKAKDYISTTVDFAAATTMSYNVPNAKIWGWDVMTKYT 506
Cdd:PRK14049  513 --ATNQPFKPTESEQQEVGV-----KYLLPNSNTLITAALFNIDQTNGLYYEVVFLAAGPTNIQVQRGKLRSRGFELEAN 585

                         570       580       590
                  ....*....|....*....|....*....|....*
gi 2564982303 507 TDL---FSLDVAYNRT-----RGKDTDTGEYISSI 533
Cdd:PRK14049  586 TSLdngLSLIASYTYTdvkiiQGPEGTIGNEVSSV 620
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
 16-118 1.00e-06

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 52.07  E-value: 1.00e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  16 PMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQD-VNMRGYDHRGVL--ILVDGVR-QGTDtghLNGTFLDP 91
Cdd:PRK10044   80 PQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDhLIIRGFAASGQSqnNYLDGLKlQGNF---YNDAVIDP 156

                          90       100
                  ....*....|....*....|....*..
gi 2564982303  92 ALIKRVEIVRGPSALLYGSGALGGVIS 118
Cdd:PRK10044  157 YMLERAELMRGPVSVLYGKSNPGGLLN 183
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
 19-117 1.27e-06

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 51.73  E-value: 1.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303  19 VSVIDTSAPENQTATSATDLLRHVPGIT---LDGTGRTN-GQDVNMRGYDHRGVlILVDGVRqgtDTGHLNgtfLDPALI 94
Cdd:PRK09840   75 ITVISEQVIKDQGATNLTEALRNVPGVGtffAGENGNTTtGDAIYMRGFDTSNS-IYVDGIR---DIGSIS---RDTFNT 147

                          90       100
                  ....*....|....*....|...
gi 2564982303  95 KRVEIVRGPSALLYGSGALGGVI 117
Cdd:PRK09840  148 EQVEVIKGPSGTDYGRSAPTGSI 170
PRK14050 PRK14050
TonB-dependent siderophore receptor;
2-119 4.31e-06

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 49.80  E-value: 4.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2564982303   2 TVTATGNARSS--FEAPMMVSVIDTSAPENQTATSATD-LLRHVPGITLDGTGRTNGQD-VNMRGYDHRGVLILVDGVrq 77
Cdd:PRK14050   64 KATATGSKTDTpiTEIPQSVSVVGRQEMDDRGVTNKVDeALRYTPGVLSQPFGTDGDTDwFYIRGFDATQTGVFLDGL-- 141

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2564982303  78 gTDTGHLNGTFL-DPALIKRVEIVRGPSALLYGSGALGGVISY 119
Cdd:PRK14050  142 -NLFSYGFGGFQiDPFMLERVEVLKGPASVLYGGSNPGGIVNM 183
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH