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Conserved domains on  [gi|395832883|ref|XP_003789481|]
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proline-rich protein 23C-like [Otolemur garnettii]

Protein Classification

DUF2476 domain-containing protein( domain architecture ID 10566296)

DUF2476 domain-containing protein similar to Homo sapiens proline-rich protein 23A/B/C

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF2476 pfam10630
Protein of unknown function (DUF2476); This is a family of proteins of unknown function. The ...
2-264 1.18e-93

Protein of unknown function (DUF2476); This is a family of proteins of unknown function. The family is rich in proline residues.


:

Pssm-ID: 463168  Cd Length: 258  Bit Score: 276.27  E-value: 1.18e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883    2 GRRPRSPSAGHAPWWGPQPGGPGPAKRPRLEKEPVLELSAGSSLEDSAGTPAADVLTSVVVLAAGCALQVPLDDVDLVLE 81
Cdd:pfam10630   1 GSRPRSPSAYPAPCWGPQPGGPGPAKRRRLEEPARPEPEAAPSLEDPAGPPAAGALTSVVVLAAGCALQLPLDDVDLVLE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883   82 PEPTSVLQVSFEGHTLILVPEVLLgLVKECSGGQGDSSVGLEPGVFVGAPGEEIVLEQPFFLTSVSEIAAQKGAFHEDTE 161
Cdd:pfam10630  81 PEPTSVLQVSLGGHTLILVPEALL-LVVEGPGGQGHSSTGLEEGAFLSAPGELVALEQGFFCASVPEIAAQEEACDEDAD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883  162 PYVLEPWMEPPAGSAAGLQPSARKVSSPYPLGPVPEPAPLVLSPSPGRRSPNPMFDLEFHLLEPFPSSPLQPLPPSPNPG 241
Cdd:pfam10630 160 PEFLEPWMDAAAGSVAGLRSSARGVLSPWPQGPVPEPWPRAPSPSPERRSPRPIWNLDFHLLEPFPSSPLQPLPPSPSPS 239
                         250       260
                  ....*....|....*....|...
gi 395832883  242 ShHTRSEgavRSPRPPCKARRSL 264
Cdd:pfam10630 240 P-HQRPE---RPPGPPCKARRRL 258
 
Name Accession Description Interval E-value
DUF2476 pfam10630
Protein of unknown function (DUF2476); This is a family of proteins of unknown function. The ...
2-264 1.18e-93

Protein of unknown function (DUF2476); This is a family of proteins of unknown function. The family is rich in proline residues.


Pssm-ID: 463168  Cd Length: 258  Bit Score: 276.27  E-value: 1.18e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883    2 GRRPRSPSAGHAPWWGPQPGGPGPAKRPRLEKEPVLELSAGSSLEDSAGTPAADVLTSVVVLAAGCALQVPLDDVDLVLE 81
Cdd:pfam10630   1 GSRPRSPSAYPAPCWGPQPGGPGPAKRRRLEEPARPEPEAAPSLEDPAGPPAAGALTSVVVLAAGCALQLPLDDVDLVLE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883   82 PEPTSVLQVSFEGHTLILVPEVLLgLVKECSGGQGDSSVGLEPGVFVGAPGEEIVLEQPFFLTSVSEIAAQKGAFHEDTE 161
Cdd:pfam10630  81 PEPTSVLQVSLGGHTLILVPEALL-LVVEGPGGQGHSSTGLEEGAFLSAPGELVALEQGFFCASVPEIAAQEEACDEDAD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883  162 PYVLEPWMEPPAGSAAGLQPSARKVSSPYPLGPVPEPAPLVLSPSPGRRSPNPMFDLEFHLLEPFPSSPLQPLPPSPNPG 241
Cdd:pfam10630 160 PEFLEPWMDAAAGSVAGLRSSARGVLSPWPQGPVPEPWPRAPSPSPERRSPRPIWNLDFHLLEPFPSSPLQPLPPSPSPS 239
                         250       260
                  ....*....|....*....|...
gi 395832883  242 ShHTRSEgavRSPRPPCKARRSL 264
Cdd:pfam10630 240 P-HQRPE---RPPGPPCKARRRL 258
PRK10263 PRK10263
DNA translocase FtsK; Provisional
34-214 8.21e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 37.76  E-value: 8.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883   34 EPVLELSAGSSLEDSAGTPAADVLTSVVVLAAGCALQVPLDDVDLVLEPE-PTSVLQVSFEGHTLilVPEVLLGLVKECS 112
Cdd:PRK10263  318 EPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQtGEPVIAPAPEGYPQ--QSQYAQPAVQYNE 395
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883  113 GGQGDssvgLEPGVFVGAPGEEIVLEQPFFLTSVSEIAAQKGAFHEDTEPYVLEPWMEPPAGSAAGLQPSARK------- 185
Cdd:PRK10263  396 PLQQP----VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTeqtyqqp 471
                         170       180       190
                  ....*....|....*....|....*....|
gi 395832883  186 -VSSPYPLGPVPEPAPLVLSPSPGRRSPNP 214
Cdd:PRK10263  472 aAQEPLYQQPQPVEQQPVVEPEPVVEETKP 501
 
Name Accession Description Interval E-value
DUF2476 pfam10630
Protein of unknown function (DUF2476); This is a family of proteins of unknown function. The ...
2-264 1.18e-93

Protein of unknown function (DUF2476); This is a family of proteins of unknown function. The family is rich in proline residues.


Pssm-ID: 463168  Cd Length: 258  Bit Score: 276.27  E-value: 1.18e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883    2 GRRPRSPSAGHAPWWGPQPGGPGPAKRPRLEKEPVLELSAGSSLEDSAGTPAADVLTSVVVLAAGCALQVPLDDVDLVLE 81
Cdd:pfam10630   1 GSRPRSPSAYPAPCWGPQPGGPGPAKRRRLEEPARPEPEAAPSLEDPAGPPAAGALTSVVVLAAGCALQLPLDDVDLVLE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883   82 PEPTSVLQVSFEGHTLILVPEVLLgLVKECSGGQGDSSVGLEPGVFVGAPGEEIVLEQPFFLTSVSEIAAQKGAFHEDTE 161
Cdd:pfam10630  81 PEPTSVLQVSLGGHTLILVPEALL-LVVEGPGGQGHSSTGLEEGAFLSAPGELVALEQGFFCASVPEIAAQEEACDEDAD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883  162 PYVLEPWMEPPAGSAAGLQPSARKVSSPYPLGPVPEPAPLVLSPSPGRRSPNPMFDLEFHLLEPFPSSPLQPLPPSPNPG 241
Cdd:pfam10630 160 PEFLEPWMDAAAGSVAGLRSSARGVLSPWPQGPVPEPWPRAPSPSPERRSPRPIWNLDFHLLEPFPSSPLQPLPPSPSPS 239
                         250       260
                  ....*....|....*....|...
gi 395832883  242 ShHTRSEgavRSPRPPCKARRSL 264
Cdd:pfam10630 240 P-HQRPE---RPPGPPCKARRRL 258
PRK10263 PRK10263
DNA translocase FtsK; Provisional
34-214 8.21e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 37.76  E-value: 8.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883   34 EPVLELSAGSSLEDSAGTPAADVLTSVVVLAAGCALQVPLDDVDLVLEPE-PTSVLQVSFEGHTLilVPEVLLGLVKECS 112
Cdd:PRK10263  318 EPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQtGEPVIAPAPEGYPQ--QSQYAQPAVQYNE 395
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 395832883  113 GGQGDssvgLEPGVFVGAPGEEIVLEQPFFLTSVSEIAAQKGAFHEDTEPYVLEPWMEPPAGSAAGLQPSARK------- 185
Cdd:PRK10263  396 PLQQP----VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTeqtyqqp 471
                         170       180       190
                  ....*....|....*....|....*....|
gi 395832883  186 -VSSPYPLGPVPEPAPLVLSPSPGRRSPNP 214
Cdd:PRK10263  472 aAQEPLYQQPQPVEQQPVVEPEPVVEETKP 501
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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