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Conserved domains on  [gi|672078681|ref|XP_008769080|]
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RCC1 and BTB domain-containing protein 2 isoform X2 [Rattus norvegicus]

Protein Classification

RCC1 and BTB domain-containing protein( domain architecture ID 13420772)

RCC1 (Regulator of chromosome condensation) and BTB (BR-C, ttk and bab)/POZ (Pox virus and Zinc finger) domain-containing protein is a chromosome condensation regulator-like guanine nucleotide exchange factor

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BTB_POZ_RCBTB2_CHC1L cd18354
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 350-466 3.61e-83

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in RCC1 and BTB domain-containing protein 2 (RCBTB2); RCBTB2 is also called chromosome condensation 1-like (CHC1-L), RCC1-like G exchanging factor, or regulator of chromosome condensation and BTB domain-containing protein 2. It is a chromosome condensation regulator-like guanine nucleotide exchange factor (GEF) protein for the Ras-related GTPase Ran. It contains an RCC1 repeat, a BTB domain, and a BACK domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


:

Pssm-ID: 349663 [Multi-domain]  Cd Length: 117  Bit Score: 253.71  E-value: 3.61e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 350 PDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNI 429
Cdd:cd18354    1 PDDHLTVAESLKREFDNPDTADLKFLVDGKYIYVHKVLLKIRCEHFRSLLNENEEEIIEMSQFSYPVYRAFLEYLYTDSI 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 672078681 430 SLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEE 466
Cdd:cd18354   81 SLSPEDAIGLLDLATFYRENRLKKLCQQTIKQGICEE 117
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 47-311 1.25e-74

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


:

Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 239.88  E-value: 1.25e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681  47 GTNCSGCLGVGDIQSTIEPRRLDSLTGkkIASLSYGSGpHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLS 126
Cdd:COG5184   73 GNNSYGQLGDGTTTDRTTPVKVPGLTG--VVAVAAGYY-HSCALKSDGTVWCWGDNSSGQLGDGTTTNRLTPVQVDAGLS 149

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 127 NkqVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGcLQNkvVMSIACGQMCSMAVVDTGEVYVWG 206
Cdd:COG5184  150 G--VVAIAAGGYHTCALKSDGTVWCWGANSYGQLGDGTTTDRPTPVQVGG-LSG--VVAVAAGGDHSCALKSDGTVWCWG 224

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 207 YNGNGQLGLGSSGNQPTPCRVAALQGirVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDrI 286
Cdd:COG5184  225 SNSSGQLGDGTTTDRATPVQVAGLTG--VVAIAAGGSHTCALKSDGTVWCWGDNSYGQLGDGTTTDRSTPVKVPGLSG-V 301

                        250       260
                 ....*....|....*....|....*
gi 672078681 287 IEIAAcHSAHTSAAKSqGGHVYMWG 311
Cdd:COG5184  302 VAVAA-GSSHTCALLT-DGTVWCWG 324
BACK_RCBTB2 cd18529
BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing protein 2 ...
 463-527 8.40e-40

BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing protein 2 (RCBTB2); RCBTB2, also called chromosome condensation 1-like (CHC1-L), or RCC1-like G exchanging factor, or regulator of chromosome condensation and BTB domain-containing protein 2, is a chromosome condensation regulator-like guanine nucleotide exchange factor (GEF) protein for the Ras-related GTPase Ran.


:

Pssm-ID: 350604  Cd Length: 65  Bit Score: 138.51  E-value: 8.40e-40
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672078681 463 ICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFISKASRVGAFKN 527
Cdd:cd18529    1 ISEENAIALLSAAVKYEAQDLEEFCFKFCINHMTVVTQTQAFADMDHDLLKNFISKASKVGAFKN 65
 
Name Accession Description Interval E-value
BTB_POZ_RCBTB2_CHC1L cd18354
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 350-466 3.61e-83

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in RCC1 and BTB domain-containing protein 2 (RCBTB2); RCBTB2 is also called chromosome condensation 1-like (CHC1-L), RCC1-like G exchanging factor, or regulator of chromosome condensation and BTB domain-containing protein 2. It is a chromosome condensation regulator-like guanine nucleotide exchange factor (GEF) protein for the Ras-related GTPase Ran. It contains an RCC1 repeat, a BTB domain, and a BACK domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349663 [Multi-domain]  Cd Length: 117  Bit Score: 253.71  E-value: 3.61e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 350 PDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNI 429
Cdd:cd18354    1 PDDHLTVAESLKREFDNPDTADLKFLVDGKYIYVHKVLLKIRCEHFRSLLNENEEEIIEMSQFSYPVYRAFLEYLYTDSI 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 672078681 430 SLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEE 466
Cdd:cd18354   81 SLSPEDAIGLLDLATFYRENRLKKLCQQTIKQGICEE 117
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 47-311 1.25e-74

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 239.88  E-value: 1.25e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681  47 GTNCSGCLGVGDIQSTIEPRRLDSLTGkkIASLSYGSGpHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLS 126
Cdd:COG5184   73 GNNSYGQLGDGTTTDRTTPVKVPGLTG--VVAVAAGYY-HSCALKSDGTVWCWGDNSSGQLGDGTTTNRLTPVQVDAGLS 149

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 127 NkqVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGcLQNkvVMSIACGQMCSMAVVDTGEVYVWG 206
Cdd:COG5184  150 G--VVAIAAGGYHTCALKSDGTVWCWGANSYGQLGDGTTTDRPTPVQVGG-LSG--VVAVAAGGDHSCALKSDGTVWCWG 224

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 207 YNGNGQLGLGSSGNQPTPCRVAALQGirVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDrI 286
Cdd:COG5184  225 SNSSGQLGDGTTTDRATPVQVAGLTG--VVAIAAGGSHTCALKSDGTVWCWGDNSYGQLGDGTTTDRSTPVKVPGLSG-V 301

                        250       260
                 ....*....|....*....|....*
gi 672078681 287 IEIAAcHSAHTSAAKSqGGHVYMWG 311
Cdd:COG5184  302 VAVAA-GSSHTCALLT-DGTVWCWG 324
BACK_RCBTB2 cd18529
BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing protein 2 ...
 463-527 8.40e-40

BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing protein 2 (RCBTB2); RCBTB2, also called chromosome condensation 1-like (CHC1-L), or RCC1-like G exchanging factor, or regulator of chromosome condensation and BTB domain-containing protein 2, is a chromosome condensation regulator-like guanine nucleotide exchange factor (GEF) protein for the Ras-related GTPase Ran.


Pssm-ID: 350604  Cd Length: 65  Bit Score: 138.51  E-value: 8.40e-40
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672078681 463 ICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFISKASRVGAFKN 527
Cdd:cd18529    1 ISEENAIALLSAAVKYEAQDLEEFCFKFCINHMTVVTQTQAFADMDHDLLKNFISKASKVGAFKN 65
BTB smart00225
Broad-Complex, Tramtrack and Bric a brac; Domain in Broad-Complex, Tramtrack and Bric a brac. ...
 371-463 1.05e-20

Broad-Complex, Tramtrack and Bric a brac; Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.


Pssm-ID: 197585 [Multi-domain]  Cd Length: 97  Bit Score: 86.98  E-value: 1.05e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681   371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSLED----SEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFY 446
Cdd:smart00225   1 DVTLVVGGKKFHAHKAVLAAHSPYFKALFSSdfkeSDKSEIYLDDVSPEDFRALLNFLYTGKLDLPEENVEELLELADYL 80

                           90
                   ....*....|....*..
gi 672078681   447 SETRLKKLCQQTIKQGI 463
Cdd:smart00225  81 QIPGLVELCEEFLLKLL 97
BTB pfam00651
BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain ...
 360-461 4.90e-18

BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is present near the N-terminus of a fraction of zinc finger (pfam00096) proteins and in proteins that contain the pfam01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerization and in some instances heteromeric dimerization. The structure of the dimerized PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.


Pssm-ID: 395526 [Multi-domain]  Cd Length: 107  Bit Score: 79.61  E-value: 4.90e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681  360 LKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFR----SSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNIsLPPEE 435
Cdd:pfam00651   1 LNELREQGELCDVTLVVGDKEFRAHKAVLAACSPYFKalfsGQESESSVSEITLDDVSPEDFEALLEFMYTGKL-ISEEN 79

                          90       100
                  ....*....|....*....|....*.
gi 672078681  436 AVGLLDLATFYSETRLKKLCQQTIKQ 461
Cdd:pfam00651  80 VDDLLAAADKLQIPSLVDKCEEFLIK 105
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
200-248 1.92e-15

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 70.24  E-value: 1.92e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 672078681  200 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
Cdd:pfam00415   2 GRVYTWGRNDYGQLGLGTTENVLVPQKVEGLSGNKVVQVACGGDHTVAL 50
PHA03098 PHA03098
kelch-like protein; Provisional
 374-513 2.25e-04

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 43.99  E-value: 2.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 374 FLVDGKYIYAHKVLLKIRCEHFRSSLED--SEDDIveMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFYSETRL 451
Cdd:PHA03098  16 IVNGGGIIKVHKIILSSSSEYFKKMFKNnfKENEI--NLNIDYDSFNEVIKYIYTGKINITSNNVKDILSIANYLIIDFL 93

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672078681 452 KKLCQQTIKQGICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVtqtsgfaEMDHDLLK 513
Cdd:PHA03098  94 INLCINYIIKIIDDNNCIDIYRFSFFYGCKKLYSAAYNYIRNNIELI-------YNDPDFIY 148
BACK smart00875
BTB And C-terminal Kelch; The BACK domain is found juxtaposed to the BTB domain; they are ...
 468-517 1.80e-03

BTB And C-terminal Kelch; The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues.


Pssm-ID: 197943 [Multi-domain]  Cd Length: 101  Bit Score: 38.09  E-value: 1.80e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 672078681   468 AIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFIS 517
Cdd:smart00875   1 CLGIRRFADAHGLEELAEKALRFILQNFSEVSSSEEFLELPLEQLLELLS 50
 
Name Accession Description Interval E-value
BTB_POZ_RCBTB2_CHC1L cd18354
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 350-466 3.61e-83

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in RCC1 and BTB domain-containing protein 2 (RCBTB2); RCBTB2 is also called chromosome condensation 1-like (CHC1-L), RCC1-like G exchanging factor, or regulator of chromosome condensation and BTB domain-containing protein 2. It is a chromosome condensation regulator-like guanine nucleotide exchange factor (GEF) protein for the Ras-related GTPase Ran. It contains an RCC1 repeat, a BTB domain, and a BACK domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349663 [Multi-domain]  Cd Length: 117  Bit Score: 253.71  E-value: 3.61e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 350 PDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNI 429
Cdd:cd18354    1 PDDHLTVAESLKREFDNPDTADLKFLVDGKYIYVHKVLLKIRCEHFRSLLNENEEEIIEMSQFSYPVYRAFLEYLYTDSI 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 672078681 430 SLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEE 466
Cdd:cd18354   81 SLSPEDAIGLLDLATFYRENRLKKLCQQTIKQGICEE 117
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 47-311 1.25e-74

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 239.88  E-value: 1.25e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681  47 GTNCSGCLGVGDIQSTIEPRRLDSLTGkkIASLSYGSGpHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLS 126
Cdd:COG5184   73 GNNSYGQLGDGTTTDRTTPVKVPGLTG--VVAVAAGYY-HSCALKSDGTVWCWGDNSSGQLGDGTTTNRLTPVQVDAGLS 149

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 127 NkqVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGcLQNkvVMSIACGQMCSMAVVDTGEVYVWG 206
Cdd:COG5184  150 G--VVAIAAGGYHTCALKSDGTVWCWGANSYGQLGDGTTTDRPTPVQVGG-LSG--VVAVAAGGDHSCALKSDGTVWCWG 224

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 207 YNGNGQLGLGSSGNQPTPCRVAALQGirVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDrI 286
Cdd:COG5184  225 SNSSGQLGDGTTTDRATPVQVAGLTG--VVAIAAGGSHTCALKSDGTVWCWGDNSYGQLGDGTTTDRSTPVKVPGLSG-V 301

                        250       260
                 ....*....|....*....|....*
gi 672078681 287 IEIAAcHSAHTSAAKSqGGHVYMWG 311
Cdd:COG5184  302 VAVAA-GSSHTCALLT-DGTVWCWG 324
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 47-312 1.77e-71

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 231.40  E-value: 1.77e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681  47 GTNCSGCLGVGDIQSTIEPRRLDSLTGkkIASLSYGSGpHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHIStNLS 126
Cdd:COG5184   23 GDNSYGQLGDGTTTDRSTPVRVPGLSN--VVAVAAGGD-HTCALKADGTVWCWGNNSYGQLGDGTTTDRTTPVKVP-GLT 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 127 NkqVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNkvVMSIACGQMCSMAVVDTGEVYVWG 206
Cdd:COG5184   99 G--VVAVAAGYYHSCALKSDGTVWCWGDNSSGQLGDGTTTNRLTPVQVDAGLSG--VVAIAAGGYHTCALKSDGTVWCWG 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 207 YNGNGQLGLGSSGNQPTPCRVAALQGirVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDrI 286
Cdd:COG5184  175 ANSYGQLGDGTTTDRPTPVQVGGLSG--VVAVAAGGDHSCALKSDGTVWCWGSNSSGQLGDGTTTDRATPVQVAGLTG-V 251

                        250       260
                 ....*....|....*....|....*.
gi 672078681 287 IEIAAchSAHTSAAKSQGGHVYMWGQ 312
Cdd:COG5184  252 VAIAA--GGSHTCALKSDGTVWCWGD 275
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 86-311 4.36e-65

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 214.84  E-value: 4.36e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681  86 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHIStNLSNkqVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 165
Cdd:COG5184    9 HSCALKSDGTVWCWGDNSYGQLGDGTTTDRSTPVRVP-GLSN--VVAVAAGGDHTCALKADGTVWCWGNNSYGQLGDGTT 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 166 ANQPIPRRVTGcLQNkvVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAAlQGIRVQRVACGYAHT 245
Cdd:COG5184   86 TDRTTPVKVPG-LTG--VVAVAAGYYHSCALKSDGTVWCWGDNSSGQLGDGTTTNRLTPVQVDA-GLSGVVAIAAGGYHT 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672078681 246 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPvVVEKDRIIEIAAcHSAHTSAAKSqGGHVYMWG 311
Cdd:COG5184  162 CALKSDGTVWCWGANSYGQLGDGTTTDRPTPVQ-VGGLSGVVAVAA-GGDHSCALKS-DGTVWCWG 224
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 47-277 5.82e-63

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 209.45  E-value: 5.82e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681  47 GTNCSGCLGVGDIQSTIEPRRLDsLTGKKIASLSYGSGpHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTnLS 126
Cdd:COG5184  123 GDNSSGQLGDGTTTNRLTPVQVD-AGLSGVVAIAAGGY-HTCALKSDGTVWCWGANSYGQLGDGTTTDRPTPVQVGG-LS 199

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 127 NkqVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGcLQNkvVMSIACGQMCSMAVVDTGEVYVWG 206
Cdd:COG5184  200 G--VVAVAAGGDHSCALKSDGTVWCWGSNSSGQLGDGTTTDRATPVQVAG-LTG--VVAIAAGGSHTCALKSDGTVWCWG 274

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672078681 207 YNGNGQLGLGSSGNQPTPCRVAALQGirVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 277
Cdd:COG5184  275 DNSYGQLGDGTTTDRSTPVKVPGLSG--VVAVAAGSSHTCALLTDGTVWCWGDNAYGQLGDGTTTDRSTPV 343
BTB_POZ_RCBTB1_CLLD7 cd18353
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 351-462 1.70e-58

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in RCC1 and BTB domain-containing protein 1 (RCBTB1); RCBTB1 is also called chronic lymphocytic leukemia deletion region gene 7 protein (CLLD7), CLL deletion region gene 7 protein, regulator of chromosome condensation and BTB domain-containing protein 1, or E4.5. It is a novel chromosome condensation regulator-like guanine nucleotide exchange factor that may be involved in cell cycle regulation by chromatin remodeling. It may also function as a tumor suppressor that regulates pathways of DNA damage/repair and apoptosis. RCBTB1 may also be a substrate adaptor for a cullin3 (CUL3) E3 ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Biallelic mutations in RCBTB1 may cause isolated and syndromic retinal dystrophy. It contains an RCC1 repeat, a BTB domain, and a BACK domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349662 [Multi-domain]  Cd Length: 117  Bit Score: 189.77  E-value: 1.70e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 351 DDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLE----DSEDDIVEMSEFSYPVFRAFLEYLYT 426
Cdd:cd18353    2 DDFLTVAESLKKEFDSPETSDLKFRVDGKYIHVHKAVLKIRCEHFRTMFQshwnEDMKEVIEIDQFSYPVYRAFLEYLYT 81

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 672078681 427 DNISLPPEEAVGLLDLATFYSETRLKKLCQQTIKQG 462
Cdd:cd18353   82 DSVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRG 117
BTB_POZ_RCBTB1_2 cd18298
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 358-461 1.30e-55

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in RCC1 and BTB domain-containing proteins, RCBTB1 and RCBTB2; The RCC1-related guanine nucleotide exchange factor (GEF) family includes RCC1 and BTB domain-containing proteins, RCBTB1 and RCBTB2, both of which are chromosome condensation regulator-like guanine nucleotide exchange factors. They contain an RCC1 repeat, a BTB domain, and a BACK domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349607 [Multi-domain]  Cd Length: 108  Bit Score: 181.68  E-value: 1.30e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 358 ESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLED----SEDDIVEMSEFSYPVFRAFLEYLYTDNISLPP 433
Cdd:cd18298    1 DSLRKAFNDPRTSDLKFRVDGKYIYVHKAILKIRCEYFRSMFQShwneDDKNVIEIDQYSYPVYYAFLRYLYTDQVDLPP 80

                         90       100
                 ....*....|....*....|....*...
gi 672078681 434 EEAVGLLDLATFYSETRLKKLCQQTIKQ 461
Cdd:cd18298   81 EDAIGLLDLANSYCEERLKKLCEDIIKQ 108
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 131-311 7.13e-52

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 180.17  E-value: 7.13e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGcLQNkvVMSIACGQMCSMAVVDTGEVYVWGYNGN 210
Cdd:COG5184    1 TQVAAGGSHSCALKSDGTVWCWGDNSYGQLGDGTTTDRSTPVRVPG-LSN--VVAVAAGGDHTCALKADGTVWCWGNNSY 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 211 GQLGLGSSGNQPTPCRVAALQGIRvqRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIA 290
Cdd:COG5184   78 GQLGDGTTTDRTTPVKVPGLTGVV--AVAAGYYHSCALKSDGTVWCWGDNSSGQLGDGTTTNRLTPVQVDAGLSGVVAIA 155

                        170       180
                 ....*....|....*....|.
gi 672078681 291 AchSAHTSAAKSQGGHVYMWG 311
Cdd:COG5184  156 A--GGYHTCALKSDGTVWCWG 174
BACK_RCBTB2 cd18529
BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing protein 2 ...
 463-527 8.40e-40

BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing protein 2 (RCBTB2); RCBTB2, also called chromosome condensation 1-like (CHC1-L), or RCC1-like G exchanging factor, or regulator of chromosome condensation and BTB domain-containing protein 2, is a chromosome condensation regulator-like guanine nucleotide exchange factor (GEF) protein for the Ras-related GTPase Ran.


Pssm-ID: 350604  Cd Length: 65  Bit Score: 138.51  E-value: 8.40e-40
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672078681 463 ICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFISKASRVGAFKN 527
Cdd:cd18529    1 ISEENAIALLSAAVKYEAQDLEEFCFKFCINHMTVVTQTQAFADMDHDLLKNFISKASKVGAFKN 65
BACK_RCBTB1_2 cd18498
BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing proteins, ...
 463-526 1.58e-30

BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing proteins, RCBTB1 and RCBTB2; The RCC1-related guanine nucleotide exchange factor (GEF) family includes RCC1 and BTB domain-containing proteins, RCBTB1 and RCBTB2, both of which are chromosome condensation regulator-like guanine nucleotide exchange factors.


Pssm-ID: 350573  Cd Length: 64  Bit Score: 113.14  E-value: 1.58e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 672078681 463 ICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFISKASRVGAFK 526
Cdd:cd18498    1 ITVENAAFLYAAAIKYNAKELEEFCFKFAVNHLTAVVQTEAFSKLDESTLKDFIVKAAEAGAFK 64
BACK_RCBTB1 cd18528
BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing protein 1 ...
 462-527 5.05e-30

BACK (BTB and C-terminal Kelch) domain found in RCC1 and BTB domain-containing protein 1 (RCBTB1); RCBTB1, also called chronic lymphocytic leukemia deletion region gene 7 protein (CLLD7), or CLL deletion region gene 7 protein, or regulator of chromosome condensation and BTB domain-containing protein 1, or E4.5, is a novel chromosome condensation regulator-like guanine nucleotide exchange factor (GEF) that may be involved in cell cycle regulation by chromatin remodeling. It may also function as a tumor suppressor that regulates pathways of DNA damage/repair and apoptosis. Moreover, RCBTB1 acts as a putative substrate adaptor for a cullin3 (CUL3) E3 ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Biallelic mutations in RCBTB1 may cause isolated and syndromic retinal dystrophy.


Pssm-ID: 350603  Cd Length: 66  Bit Score: 111.92  E-value: 5.05e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672078681 462 GICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFISKASRVGAFKN 527
Cdd:cd18528    1 GITVENAFSLLSAAVRYDAEDLEEFCFKFCVNHLTEVTQTAAFWQMDGNLLKEFIAKASKCGAFKN 66
BTB_POZ_ABTB2-like cd18297
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 364-467 3.31e-21

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 2 (ABTB2) and similar proteins; This family includes ABTB2, BTBD11, plant ARM repeat protein interacting with ABF2 (ARIA), and similar proteins. ABTB2, also called bood POZ containing gene type 2 (BPOZ-2), is a scaffold protein that controls the degradation of many biological proteins ranging from embryonic development to tumor progression. It may be involved in the initiation of hepatocyte growth. ABTB2 functions as an adaptor protein for the E3 ubiquitin ligase scaffold protein Cullin-3. It directly binds to eukaryotic elongation factor 1A1 (eEF1A1) to promote eEF1A1 ubiquitylation and degradation, and prevent translation. The BTBD11 gene has been recently identified as an all-trans retinoic acid (atRA)-responsive gene that lies downstream of atRA and its receptors in the regulation of neurite outgrowth and cell adhesion in neural as well as non-neural tissues. ARIA is an armadillo (ARM) repeat and BTB domain-containing protein that acts as a positive regulator of ABA response via the modulation of the transcriptional activity of ABF2. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349606 [Multi-domain]  Cd Length: 117  Bit Score: 88.87  E-value: 3.31e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 364 FDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRS-----SLEDSEDDIvEMSEFSYPVFRAFLEYLYT---DNISLPPEE 435
Cdd:cd18297    7 VNNPEMSDVTFLVEGRPFYAHKIVLVTASDRFKSmlssgSTEAQTPVI-EIPDIRYDIFQLMMQYLYTggvESLDVAQDD 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 672078681 436 AVGLLDLATFYSETRLKKLCQQTIKQGICEEN 467
Cdd:cd18297   86 ALELLRAASFFQLDGLKRHCEILLSQQIDLDN 117
BTB smart00225
Broad-Complex, Tramtrack and Bric a brac; Domain in Broad-Complex, Tramtrack and Bric a brac. ...
 371-463 1.05e-20

Broad-Complex, Tramtrack and Bric a brac; Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.


Pssm-ID: 197585 [Multi-domain]  Cd Length: 97  Bit Score: 86.98  E-value: 1.05e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681   371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSLED----SEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFY 446
Cdd:smart00225   1 DVTLVVGGKKFHAHKAVLAAHSPYFKALFSSdfkeSDKSEIYLDDVSPEDFRALLNFLYTGKLDLPEENVEELLELADYL 80

                           90
                   ....*....|....*..
gi 672078681   447 SETRLKKLCQQTIKQGI 463
Cdd:smart00225  81 QIPGLVELCEEFLLKLL 97
BTB_POZ_BTBD19 cd18294
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 357-459 8.91e-20

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 19 (BTBD19); BTBD19 is a BTB domain-containing protein. Its function remains unclear. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349603 [Multi-domain]  Cd Length: 111  Bit Score: 84.60  E-value: 8.91e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 357 AESLKREFDNPDTADLKFLV--DGKYIYAHKVLLKIRCEHFRSSL-----EDSEDDIVEMSEFSYPVFRAFLEYLYTDNI 429
Cdd:cd18294    2 AADMKSLINNPEFSDVKFLVgpERQEIFAHKCILAARCEVFRAMFltgpqKESTQSPLVLSDIEPEVFRAVLEFIYTNCV 81

                         90       100       110
                 ....*....|....*....|....*....|
gi 672078681 430 SLPPEEAVGLLDLATFYSETRLKKLCQQTI 459
Cdd:cd18294   82 TLSNHTVIEVLAAAVEYGLDELRKLCERFI 111
BTB2_POZ_RhoBTB cd18300
second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 364-459 9.35e-20

second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Rho-related BTB domain-containing proteins (RhoBTB); RhoBTB proteins constitute a subfamily of atypical members within the Rho family of small guanosine triphosphatases (GTPases), which is characterized by containing a GTPase domain (in most cases, non-functional) followed by a proline-rich region, a tandem of 2 BTB domains, and a conserved C-terminal region. In humans, the RhoBTB subfamily consists of 3 isoforms: RhoBTB1, RhoBTB2, and RhoBTB3. Orthologs are present in several other eukaryotes, such as Drosophila and Dictyostelium, but have been lost in plants and fungi. This model corresponds to the second BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349609 [Multi-domain]  Cd Length: 108  Bit Score: 84.60  E-value: 9.35e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 364 FDNPDTADLKFLVDGKYIYAHKVLLKIRCEH----FRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPE-EAVG 438
Cdd:cd18300    4 LNKGLFSDVTFIVEDGTIPAHKALLVARCDVmaamFGGNFRESSAKEVELPGVSKETFLALLEYLYTDQAPILEDgDCVG 83

                         90       100
                 ....*....|....*....|.
gi 672078681 439 LLDLATFYSETRLKKLCQQTI 459
Cdd:cd18300   84 LIVLANRLCLPRLVALCEQYI 104
BTB pfam00651
BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain ...
 360-461 4.90e-18

BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is present near the N-terminus of a fraction of zinc finger (pfam00096) proteins and in proteins that contain the pfam01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerization and in some instances heteromeric dimerization. The structure of the dimerized PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.


Pssm-ID: 395526 [Multi-domain]  Cd Length: 107  Bit Score: 79.61  E-value: 4.90e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681  360 LKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFR----SSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNIsLPPEE 435
Cdd:pfam00651   1 LNELREQGELCDVTLVVGDKEFRAHKAVLAACSPYFKalfsGQESESSVSEITLDDVSPEDFEALLEFMYTGKL-ISEEN 79

                          90       100
                  ....*....|....*....|....*.
gi 672078681  436 AVGLLDLATFYSETRLKKLCQQTIKQ 461
Cdd:pfam00651  80 VDDLLAAADKLQIPSLVDKCEEFLIK 105
BTB_POZ_ZBTB_KLHL-like cd18186
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 370-446 7.88e-18

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing (ZBTB) proteins, Kelch-like (KLHL) proteins, and similar proteins; This family includes a variety of BTB/POZ domain-containing proteins, such as zinc finger and BTB domain-containing (ZBTB) proteins and Kelch-like (KLHL) proteins. They have diverse functions, such as transcriptional regulation, chromatin remodeling, protein degradation and cytoskeletal regulation. Many BTB/POZ proteins contain one or two additional domains, such as kelch repeats, zinc-finger domains, FYVE (Fab1, YOTB, Vac1, and EEA1) fingers, or ankyrin repeats. These special additional domains or interaction partners provide unique characteristics and functions to BTB/POZ proteins. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349497 [Multi-domain]  Cd Length: 82  Bit Score: 77.98  E-value: 7.88e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 370 ADLKFLVDGKYIYAHKVLLKIRCEHFR----SSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATF 445
Cdd:cd18186    2 CDVTLVVGGREFPAHRAVLAARSPYFRamfsSGMKESSSSEIELDDVSPEAFEALLDYIYTGELELSEENVEELLAAADK 81


                 .
gi 672078681 446 Y 446
Cdd:cd18186   82 L 82
BTB_POZ_ARIA_plant cd18352
BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in ...
 365-467 1.15e-15

BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in plant ARM repeat protein interacting with ABF2 (ARIA) and similar proteins; ARIA is an armadillo (ARM) repeat and BTB domain-containing protein that acts as a positive regulator of ABA response via the modulation of the transcriptional activity of ABF2, a transcription factor which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements. ARIA is a novel abscisic acid signaling component. It negatively regulates seed germination and young seedling growth. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349661 [Multi-domain]  Cd Length: 116  Bit Score: 73.28  E-value: 1.15e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 365 DNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLE----DSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLL 440
Cdd:cd18352    9 NNATLSDVTFLVEGRRFYAHRIALLASSDAFRAMFDggyrEKEARDIEIPNIRWEVFELMMRFIYTGSVDITNDIAKDLL 88

                         90       100
                 ....*....|....*....|....*..
gi 672078681 441 DLATFYSETRLKKLCQQTIKQGICEEN 467
Cdd:cd18352   89 RAADQYLLEGLKRLCEYTIAQDLTLEN 115
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
200-248 1.92e-15

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 70.24  E-value: 1.92e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 672078681  200 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
Cdd:pfam00415   2 GRVYTWGRNDYGQLGLGTTENVLVPQKVEGLSGNKVVQVACGGDHTVAL 50
BTB2_POZ_ABTB1_BPOZ1 cd18296
second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 365-464 2.92e-15

second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1); ABTB1, also called elongation factor 1A-binding protein or bood POZ containing gene type 1 (BPOZ-1), is an anti-proliferative factor that may act as a mediator of the phosphatase and tensin homolog (PTEN) growth-suppressive signaling pathway. It may play a role in developmental processes. ABTB1 contains an ankyrin repeat and two BTB domains. This model corresponds to the second BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349605 [Multi-domain]  Cd Length: 121  Bit Score: 71.94  E-value: 2.92e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 365 DNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLED---------SEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEE 435
Cdd:cd18296   13 QELSFPDVCFQVEGHRFPCHKAFFCGRSDYFKALLRDhfaeseennGSIPVVTLHDVSPEVFAIVLYYIYTDDTDLPPEN 92

                         90       100
                 ....*....|....*....|....*....
gi 672078681 436 AVGLLDLATFYSETRLKKLCQQTIKQGIC 464
Cdd:cd18296   93 AYDVLYVADMYLLPGLKRLCGTVLAQSLD 121
BTB_POZ_BTBD17 cd18292
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 353-457 1.05e-14

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17); BTBD17, also called galectin-3-binding protein-like, is a BTB domain-containing protein. Its function remains unclear. It may be associated with hepatocellular carcinoma. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349601 [Multi-domain]  Cd Length: 114  Bit Score: 70.39  E-value: 1.05e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 353 HLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSL-----EDSEDDIVEMSE--FSYPVFRAFLEYLY 425
Cdd:cd18292    1 SREFLQDIAQLYNNEELSDIVLRVGGKVFHAHRLILAKSSDVFRVMLsndwwSESKQSEIELVEdpECAAVFEKFLRYLY 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 672078681 426 TDNISLPPEEAVGLLDLATFYSETRLKKLCQQ 457
Cdd:cd18292   81 TGQISVNLETALPLLMLADKYNVTDLKQLCVD 112
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
146-196 2.83e-14

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 67.16  E-value: 2.83e-14
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 672078681  146 DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVmSIACGQMCSMAV 196
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTTENVLVPQKVEGLSGNKVV-QVACGGDHTVAL 50
BTB_POZ_BTBD9 cd18287
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 352-485 2.09e-13

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 9 (BTBD9); BTBD9 is a risk factor for Restless Legs Syndrome (RLS) encoding a Cullin-3 substrate adaptor. The BTBD9 gene may be associated with antipsychotic-induced RLS in schizophrenia. Mutations in BTBD9 lead to reduced dopamine, increased locomotion and sleep fragmentation. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349596 [Multi-domain]  Cd Length: 119  Bit Score: 66.88  E-value: 2.09e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 352 DHLT-VAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRS----SLEDSEDDIVEMSEFSYPVFRAFLEYLYT 426
Cdd:cd18287    4 DHVHfLSEDIGALFLNEEYSDVTFVVEEKRFPAHRVILAARSEYFRAllygGMRESQQSEIELKDTNAEAFKALLKYIYT 83

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 672078681 427 dnislppeeavGLLDLATFYsetrlkklcqqtikqgicEENAIALLSAAVKYDAQDLEE 485
Cdd:cd18287   84 -----------GRLTLTDLK------------------EDVLLDVLGLAHQYGFEELEA 113
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
93-143 2.27e-13

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 64.46  E-value: 2.27e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 672078681   93 DGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKqVIEVACGSYHSLVL 143
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTTENVLVPQKVEGLSGNK-VVQVACGGDHTVAL 50
BTB_POZ_ABTB2_BPOZ2 cd18350
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 365-469 4.39e-13

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 2 (ABTB2); ABTB2, also called bood POZ containing gene type 2 (BPOZ-2), is a scaffold protein that controls the degradation of many biological proteins with various functions ranging from embryonic development to tumor progression. It may be involved in the initiation of hepatocyte growth. It inhibits the aggregation of alpha-synuclein, with implications for Parkinson's disease. ABTB2 functions as an adaptor protein for the E3 ubiquitin ligase scaffold protein Cullin-3. It directly binds to eukaryotic elongation factor 1A1 (eEF1A1) to promote eEF1A1 ubiquitylation and degradation, and prevent translation. It is also involved in the growth suppressive effect of the phosphatase and tensin homolog (PTEN). It contains an ankyrin repeat, BTB/POZ, and BACK domains. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349659 [Multi-domain]  Cd Length: 134  Bit Score: 66.41  E-value: 4.39e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 365 DNPDTADLKFLVDGKYIYAHKVLLKIRCEHF------RSSLEDSEDDIVEMSEFSYPVFRAFLEYLY---TDNISLPPEE 435
Cdd:cd18350   20 NNKEMSDVTFLVEGKLFYAHKVLLVTASNRFkslltnKSEQESQGSKTIEISDIKYHIFQMLMQYLYyggTESMEIPIAD 99

                         90       100       110
                 ....*....|....*....|....*....|....
gi 672078681 436 AVGLLDLATFYSETRLKKLCQQTIKQGICEENAI 469
Cdd:cd18350  100 VLELLSAASLFQLDALQRHCEILCSQTINLENAV 133
BTB_POZ_BTBD11 cd18351
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 364-469 2.28e-12

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 11 (BTBD11); BTBD11, also called ankyrin repeat and BTB/POZ domain-containing protein BTBD11, is a BTB-domain-containing protein. The BTBD11 gene has been recently identified as an all-trans retinoic acid (atRA)-responsive gene that lies downstream of atRA and its receptors in the regulation of neurite outgrowth and cell adhesion in neural as well as non-neural tissues. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349660 [Multi-domain]  Cd Length: 131  Bit Score: 64.23  E-value: 2.28e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 364 FDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLED---SEDDIVEMSEFSYPVFRAFLEYLY---TDNISLPPEEAV 437
Cdd:cd18351   19 LNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSNkpsAENTCIEISYVKYHIFQLVMQYLYcggTESLLIKNNEIM 98

                         90       100       110
                 ....*....|....*....|....*....|..
gi 672078681 438 GLLDLATFYSETRLKKLCQQTIKQGICEENAI 469
Cdd:cd18351   99 ELLSAAKFFQLEALQRHCEIICAKSINTENCV 130
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
251-299 6.36e-11

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 57.53  E-value: 6.36e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 672078681  251 EGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTTENVLVPQKVEGLSGNKVVQVACGGDHTVA 49
BTB_POZ_Rank-5 cd18303
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 364-469 1.29e-10

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in rabankyrin-5 (Rank-5); Rank-5, also called ankyrin repeat and FYVE domain-containing protein 1 (ANKFY1) or ankyrin repeats hooked to a zinc finger motif (ANKHZN), is a Rab5 effector that regulates and coordinates different endocytic mechanisms. It contains an N-terminal BTB domain, followed by a BACK domain, several ankyrin (ANK) repeats and a C-terminal FYVE domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349612 [Multi-domain]  Cd Length: 120  Bit Score: 58.87  E-value: 1.29e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 364 FDNPDTADLKFLVDGKYIYAHKVLLKIRCEhFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEE--AVGLLD 441
Cdd:cd18303   13 FDKELYSDITIKLADKSIPAHKFVLAARSE-KWSNENLASTNELDLSDISYEVVLALLRWLYTDELDLTLDDefLLELMK 91

                         90       100
                 ....*....|....*....|....*...
gi 672078681 442 LATFYSETRLKKLCQQTIKQGICEENAI 469
Cdd:cd18303   92 AAKRFQLTDLVERCERALMSSVNVDNCI 119
BTB_POZ_BPM_plant cd18280
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 365-456 1.68e-10

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in plant BTB/POZ-MATH (BPM) protein family; The BPM protein family includes Arabidopsis thaliana BTB/POZ and MATH domain-containing proteins, AtBPM1-6, and similar proteins from other plants. BPM protein, also called protein BTB-POZ and MATH domain, may act as a substrate-specific adaptor of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349589 [Multi-domain]  Cd Length: 121  Bit Score: 58.49  E-value: 1.68e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 365 DNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRS----SLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNI----------- 429
Cdd:cd18280   10 ESEEGADVTFNVDGEKFRAHKLVLAARSPVFRSmlfgPMREENEGEIVIEDVEPPVFKALLHFIYKDELpddvepagsds 89

                         90       100
                 ....*....|....*....|....*...
gi 672078681 430 -SLPPEEAVGLLDLATFYSETRLKKLCQ 456
Cdd:cd18280   90 sSLDTTMAQHLLAAADRYALERLRLLCE 117
RCC1_2 pfam13540
Regulator of chromosome condensation (RCC1) repeat;
130-159 1.95e-10

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 463914 [Multi-domain]  Cd Length: 30  Bit Score: 55.51  E-value: 1.95e-10
                          10        20        30
                  ....*....|....*....|....*....|
gi 672078681  130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 159
Cdd:pfam13540   1 VVSVAAGDNHTLALTSDGRVYCWGDNSYGQ 30
BTB2_POZ_LZTR1 cd18309
second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 367-467 3.72e-10

second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in leucine-zipper-like transcriptional regulator 1 (LZTR-1); LZTR-1 is a golgi BTB-kelch protein that is degraded upon induction of apoptosis. It may also function as a transcriptional regulator that plays a crucial role in embryogenesis. Germline loss-of-function mutations in LZTR-1 predispose to an inherited disorder of multiple schwannomas. LZTR-1 contains two BTB domains. This model corresponds to the second domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349618 [Multi-domain]  Cd Length: 126  Bit Score: 57.78  E-value: 3.72e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 367 PDTADLKFLVDGKYIYAHKVLLKIRCEH----FRSSLedSEDDIVEMS--EF--SYPVFRAFLEYLYTDNISLPPEEAVG 438
Cdd:cd18309   18 GDFCDITLLLDGHPIPAHKAILAARCSYfeamFRSFM--PEDNTVNISigEMvpSRQAFDSLLRYIYYGDVTMPPEDSLY 95

                         90       100       110
                 ....*....|....*....|....*....|.
gi 672078681 439 LLDLATFY--SETRLKKLCQQTIKQGICEEN 467
Cdd:cd18309   96 LFSAPYFYgfTNNRLQAYCKQNLEMNVSFEN 126
BACK cd14733
BACK (BTB and C-terminal Kelch) domain; The BACK domain is found in architectures C-terminal ...
 464-517 7.07e-10

BACK (BTB and C-terminal Kelch) domain; The BACK domain is found in architectures C-terminal to a BTB domain, in a diverse set of architectures together with Kelch, MATH, and/or TAZ domains. It is involved in interactions with the Cullin3 (Cul3) ubiquitin ligase complex, as well as in homo-oligomerization. Most proteins containing the BACK domain are understood to function as adaptor proteins that play a role in ubiquitination of various substrates.


Pssm-ID: 350515 [Multi-domain]  Cd Length: 55  Bit Score: 54.59  E-value: 7.07e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 672078681 464 CEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFIS 517
Cdd:cd14733    1 DPENCLGILELADLYNLEELKEKALKFILENFEEVSKSEEFLELSVELLLELLS 54
BTB2_POZ_BTBD8 cd18286
second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 357-464 1.59e-09

second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8); BTBD8 is a BTB-domain-containing Kelch-like protein that may play a role in developmental processes. It may also act as a protein-protein adaptor in a transcription complex and thus be involved in brain development. BTBD8 contains two BTB domains. This model corresponds to the second domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349595 [Multi-domain]  Cd Length: 121  Bit Score: 55.73  E-value: 1.59e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 357 AESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLED----SEDDIVEMSEFSYPVFRAFLEYLYTDNISLP 432
Cdd:cd18286    5 GKDLLQLFLNGEDSDITIKVDGKTFKAHRCILCARSSYFAAMLSGswaeSNSSEITLTGVSHAAVSFVLLFIYGGVLDLP 84

                         90       100       110
                 ....*....|....*....|....*....|...
gi 672078681 433 PEEAVG-LLDLATFYSETRLKKLCQQTIKQGIC 464
Cdd:cd18286   85 DDVNLGeLLSLADMYGLDGLKDVVAYTLRRDYC 117
BTB_POZ cd01165
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 373-446 2.39e-09

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Proteins in this superfamily are characterized by the presence of a common protein-protein interaction motif of about 100 amino acids, known as the BTB/POZ domain. Members include transcription factors, oncogenic proteins, ion channel proteins, and potassium channel tetramerization domain (KCTD) proteins. They have been identified in poxviruses and many eukaryotes, and have diverse functions, such as transcriptional regulation, chromatin remodeling, protein degradation and cytoskeletal regulation. Many BTB/POZ proteins contain one or two additional domains, such as kelch repeats, zinc-finger domains, FYVE (Fab1, YOTB, Vac1, and EEA1) fingers, or ankyrin repeats, among others. These special additional domains or interaction partners provide unique characteristics and functions to BTB/POZ proteins. In ion channel proteins and KCTD proteins, the BTB/POZ domain is also called the tetramerization (T1) domain.


Pssm-ID: 349496 [Multi-domain]  Cd Length: 79  Bit Score: 53.82  E-value: 2.39e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 672078681 373 KFLVDGKYIYAHKVLLKIRCEHFR----SSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFY 446
Cdd:cd01165    2 VLVVEGEKFHVNKELLAQSSEYFRalfrGGFRESGQAEINLRDISPEDFRALLEFLYGGKRDLDASNLLELLEAANFL 79
BTB_POZ_trishanku-like cd18314
BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in ...
 364-455 2.45e-09

BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Dictyostelium discoideum trishanku and similar proteins; Trishanku is a novel regulator required for normal morphogenesis and cell-type stability in Dictyostelium discoideum. It contains a BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349623 [Multi-domain]  Cd Length: 96  Bit Score: 54.27  E-value: 2.45e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 364 FDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSL-----EDSEDDIVeMSEFSYPVFRAFLEYLYTDNISLPPEEAVG 438
Cdd:cd18314    1 YNDSEFSDVVLCVGDRKFFAHRIVLCARSPVFRSMLtgsmiESNLKEVT-LEDVEPEIFETVLKYMYTGQVTLSEENVLD 79

                         90
                 ....*....|....*..
gi 672078681 439 LLDLATFYSETRLKKLC 455
Cdd:cd18314   80 LLMLASKYQVPDLEKLC 96
BTB2_POZ_RHOBTB3 cd18360
second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 360-459 7.59e-09

second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Rho-related BTB domain-containing protein 3 (RhoBTB3); RhoBTB3 is an atypical Rho family small guanosine triphosphatase (GTPase) and is a member of the RhoBTB subfamily, which is characterized by containing a GTPase domain (in most cases, non-functional) followed by a proline-rich region, tandem BTB domains, and a conserved C-terminal region. The carboxyl terminal extension that harbors two BTB domains is capable of assembling cullin 3-dependent ubiquitin ligase complexes. RhoBTB3 is a Golgi-associated Rho-related ATPase that regulates the S/G2 transition of the cell cycle by targeting cyclin E for ubiquitylation. It is involved in vesicle trafficking and in targeting proteins for degradation in the proteasome. It binds directly to Rab9 GTPase and functions with Rab9 in protein transport from endosomes to the trans Golgi network. It also promotes proteasomal degradation of Hypoxia-inducible factor alpha (HIFalpha) through facilitating hydroxylation and suppresses the Warburg effect. This model corresponds to the second BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349669 [Multi-domain]  Cd Length: 110  Bit Score: 53.70  E-value: 7.59e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 360 LKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCE----HFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDniSLPPE- 434
Cdd:cd18360    1 LGLFFNSPLLADVVFKIQGTTVPAHRAVLVARCEvmaaMFNGNYAEAKSFLVPIYGVSKDTFLSFLEYLYTD--SCCPAs 78

                         90       100
                 ....*....|....*....|....*..
gi 672078681 435 --EAVGLLDLATFYSETRLKKLCQQTI 459
Cdd:cd18360   79 ilQAMALLICAEMYQVSRLQHICELYI 105
RCC1_2 pfam13540
Regulator of chromosome condensation (RCC1) repeat;
235-264 1.00e-08

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 463914 [Multi-domain]  Cd Length: 30  Bit Score: 50.89  E-value: 1.00e-08
                          10        20        30
                  ....*....|....*....|....*....|
gi 672078681  235 VQRVACGYAHTLVLTDEGQIYAWGANSYGQ 264
Cdd:pfam13540   1 VVSVAAGDNHTLALTSDGRVYCWGDNSYGQ 30
BTB_POZ_NPR_plant cd18310
BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in ...
 359-441 3.57e-08

BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in plant regulatory proteins, NPR1-4, and similar proteins; NPR1 and NPR2 are essential for pathogenicity and the utilization of many nitrogen sources. NPR1 is also called nitrogen pathogenicity regulation protein NPR1, non-inducible immunity protein 1 (Nim1), nonexpresser of PR genes 1, or salicylic acid insensitive 1 (Sai1). It acts as a transcription coactivator that plays dual roles in regulating plant immunity. NPR3 and NPR4 are involved in negative regulation of defense responses against pathogens in plant. NPR proteins contain a BTB domain, DUF3420, ankyrin (ANK) repeats, and a conserved C-terminal domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349619 [Multi-domain]  Cd Length: 145  Bit Score: 52.69  E-value: 3.57e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 359 SLKREFDNPDT--ADLKFLVD-GKYIYAHKVLLKIRCEHFRSSLEDSEDD------------IVEMSEFSYPVFRAFLEY 423
Cdd:cd18310    6 DLENLLDSPDLfySDAEIIVEgGRPVPVHRCILAARSPFFRDIFASAKAEgantkpklelreLIPGGIVGYDAFMLVLSY 85

                         90
                 ....*....|....*...
gi 672078681 424 LYTDNISLPPEEAVGLLD 441
Cdd:cd18310   86 LYSGRLRLVPKEGSACVD 103
BTB2_POZ_IBtk cd18302
second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 365-463 3.63e-08

second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in inhibitor of Bruton tyrosine kinase (IBtk); IBtk is an inhibitor or negative regulator of Bruton tyrosine kinase (Btk), which is required for B-cell differentiation and development. IBtk binds to the PH domain of Btk and down-regulates the Btk kinase activity. It contains two BTB domains. This model corresponds to the second BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349611 [Multi-domain]  Cd Length: 113  Bit Score: 51.60  E-value: 3.63e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 365 DNPDTADLKFL-VDGKYIYAHKVLLKIRCEHFRSSL-----EDSEDDIVEMsEFSYPVFRAFLEYLYTDNISLPPE---- 434
Cdd:cd18302    1 KHSDLYDVTIVsEDGKEFPCHKCVLVARLEYFHSMLssswiEASSCSALTM-PIPSDILEIILDYLYTDEASAVKEsqnv 79

                         90       100       110
                 ....*....|....*....|....*....|
gi 672078681 435 EAV-GLLDLATFYSETRLKKLCQQTIKQGI 463
Cdd:cd18302   80 EFLcNVLVIADQLLITRLKEICEVALVELL 109
BTB_POZ_SPOPL cd18343
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 356-467 2.58e-07

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in speckle-type POZ protein-like (SPOPL); SPOPL, also called HIB homolog 2 or Roadkill homolog 2, is a component of a cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complexes that mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The complexes may contain homodimeric SPOPL or the heterodimers formed by speckle-type POZ protein (SPOP) and SPOPL, which are less efficient than ubiquitin ligase complexes containing only SPOP. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349652 [Multi-domain]  Cd Length: 123  Bit Score: 49.62  E-value: 2.58e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 356 VAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRC----EHFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISL 431
Cdd:cd18343    8 LAEDLGNLWENSRFTDCSLFVGGQEFKAHKSILAARSpvfnAMFEHEMEESKKNRVEINDVDPEVFKEMMRFIYTGKAPN 87

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 672078681 432 PPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEEN 467
Cdd:cd18343   88 LDKMADNLLAAADKYALERLKVMCEEALCNNLSVEN 123
BTB_POZ_roadkill-like cd18345
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 353-468 3.22e-07

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Drosophila melanogaster protein roadkill and similar proteins; Drosophila melanogaster protein roadkill, also called Hh-induced MATH and BTB domain-containing protein (HIB), is a hedgehog-induced BTB protein that modulates hedgehog signaling by degrading Ci/Gli transcription factor. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349654 [Multi-domain]  Cd Length: 121  Bit Score: 49.08  E-value: 3.22e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 353 HLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCE----HFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDN 428
Cdd:cd18345    2 ECRLSDDLGLLFERSAFSDVTLCVGGREFQAHKAILAARSPvfnaMFEHEMEERKQNRVEITDVDHEVMREMLRFIYTGK 81

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 672078681 429 ISLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEENA 468
Cdd:cd18345   82 APNLDKMADDLLAAADKYALERLKVMCEEALCSNLSVENV 121
BTB1_POZ_ABTB1_BPOZ1 cd18295
first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 358-457 4.99e-07

first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1); ABTB1, also called elongation factor 1A-binding protein or bood POZ containing gene type 1 (BPOZ-1), is an anti-proliferative factor that may act as a mediator of the phosphatase and tensin homolog (PTEN) growth-suppressive signaling pathway. It may play a role in developmental processes. ABTB1 contains an ankyrin repeat and two BTB domains. This model corresponds to the first BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349604 [Multi-domain]  Cd Length: 119  Bit Score: 48.40  E-value: 4.99e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 358 ESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLED--SEDDIVEMSE--FSYPVFRAFLEYLYTDNISLPP 433
Cdd:cd18295    8 EFLRRLLEQGSYSDVTFNVHGESFPAHRCILSARSPYFAEMFETkwKDKREINLKHplVNPDAFRALLQYLYTGRLEIHV 87

                         90       100
                 ....*....|....*....|....
gi 672078681 434 EEAVGLLDLAtfySETRLKKLCQQ 457
Cdd:cd18295   88 DDVEDCKRLA---KQCRLEELIEE 108
BTB_POZ_BTBD1_2 cd18281
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 355-467 6.32e-07

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing proteins, BTBD1 and BTBD2; This family includes BTB/POZ domain-containing proteins BTBD1 and BTBD2, both of which are BTB-domain-containing Kelch-like proteins that interact with DNA topoisomerase 1 (Topo1), a key enzyme of cell survival. BTBD1 and BTBD2 colocalize to cytoplasmic bodies with the RBCC/tripartite motif protein, TRIM5delta. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349590 [Multi-domain]  Cd Length: 127  Bit Score: 48.59  E-value: 6.32e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 355 TVAESLKREFDNPDTADLKFLVdGK-----YIYAHKVLLKIRC----EHFRSSLEDSEDDIvEMSEFSYPVFRAFLEYLY 425
Cdd:cd18281    8 TVKERFAFLFNNETLSDVHFIV-GKgdneqRIPAHKFVLSIGSavfdAMFNGGMATTSAEI-ELPDVEPAAFLALLRFLY 85

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 672078681 426 TDNISLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEEN 467
Cdd:cd18281   86 SDEVQIGPETVMTTLYTAKKYAVPALESACVEFLKKNLSSDN 127
BTB_POZ_SPOP-like cd18279
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 356-467 7.88e-07

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in speckle-type POZ protein (SPOP) and similar proteins; This family includes speckle-type POZ protein (SPOP), speckle-type POZ protein-like (SPOPL), TD and POZ domain-containing proteins (TDPOZ), Drosophila melanogaster protein roadkill and similar proteins. Both, SPOP and SPOPL, serve as adaptors of cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complexes that mediate the ubiquitination and proteasomal degradation of target proteins. TDPOZ is a family of bipartite animal and plant proteins that contain a tumor necrosis factor receptor-associated factor (TRAF) domain (TD) and a POZ/BTB domains. TDPOZ proteins may be nuclear scaffold proteins probably involved in transcription regulation in early development and other cellular processes. Drosophila melanogaster protein roadkill, also called Hh-induced MATH and BTB domain-containing protein (HIB), is a hedgehog-induced BTB protein that modulates hedgehog signaling by degrading Ci/Gli transcription factor. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349588 [Multi-domain]  Cd Length: 120  Bit Score: 47.91  E-value: 7.88e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 356 VAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRS----SLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISL 431
Cdd:cd18279    5 LAEDLGNLWENSRFTDCCLCVGGQEFQAHKAILAARSPVFSAmfehEMEESKKNRVEINDVDPEVFKEMMRFIYTGKAPN 84

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 672078681 432 PPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEEN 467
Cdd:cd18279   85 LDKMADDLLAAADKYALERLKVMCEDALCSNLSVEN 120
BTB_POZ_KLHL7 cd18237
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-467 1.60e-06

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 7 (KLHL7); KLHL7 is a component of a Cul3-based E3 ubiquitin ligase complex and is involved in the ubiquitination of target proteins for proteasome-mediated degradation. Mutations in KLHL7 causes autosomal-dominant retinitis pigmentosa. It contains a BTB domain and kelch repeats, characteristics of a kelch family protein. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349546 [Multi-domain]  Cd Length: 126  Bit Score: 47.48  E-value: 1.60e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIrCEH-----FRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATF 445
Cdd:cd18237   23 DVILIVEGREIKAHRVVLAA-ASHffhlmFTSNMTESKSSEVELKDAEPDIIELLVEFAYTARISVNSNNVQSLLDAANQ 101

                         90       100
                 ....*....|....*....|..
gi 672078681 446 YSETRLKKLCQQTIKQGICEEN 467
Cdd:cd18237  102 YQIEPVKKMCVDFLKEQLDASN 123
BTB_POZ_KLHL16_gigaxonin cd18245
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 365-455 1.85e-06

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in gigaxonin; Gigaxonin, also called Kelch-like protein 16 (KLHL16), may be a cytoskeletal component that directly or indirectly plays an important role in neurofilament architecture. It may also act as a substrate-specific adaptor of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins, including tubulin folding cofactor B (TBCB), microtubule-associated protein MAP1B, and glial fibrillary acidic protein (GFAP). Gigaxonin is mutated in giant axonal neuropathy. It contains a BTB domain and kelch repeats, characteristics of a kelch family protein. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349554 [Multi-domain]  Cd Length: 111  Bit Score: 46.56  E-value: 1.85e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 365 DNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSL------EDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVG 438
Cdd:cd18245   10 EEPHLCDATLVVGGEEIPVQKNVLAAASPYFRAKLnynppkDDGSTYKIELEGISVEVMEEILDYIYTGQIKLSEDNIQD 89

                         90
                 ....*....|....*..
gi 672078681 439 LLDLATFYSETRLKKLC 455
Cdd:cd18245   90 IVQAADLLLMTDLKDLC 106
BTB_POZ_ZBTB41 cd18226
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-445 3.62e-06

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 41 (ZBTB41); ZBTB41, also called FRBZ1, may be involved in transcriptional regulation. Its specific function is as yet unknown. It contains a BTB/POZ domain, a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349535 [Multi-domain]  Cd Length: 114  Bit Score: 45.95  E-value: 3.62e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSL-EDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATF 445
Cdd:cd18226   24 DLVITVEGKEFSAHKVVVAVGSSYFHACLsKNPNTDAVTLDHVSYSVFQHLLEFLYTSEFFVYENEIPLVLEAAKF 99
BTB_POZ_SPOP cd18342
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 356-468 5.19e-06

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in speckle-type POZ protein (SPOP); SPOP, also called HIB homolog 1 or Roadkill homolog 1, is a novel nuclear speckle-type protein which serves as an adaptor of a cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex that mediates the ubiquitination and proteasomal degradation of target proteins, such as BRMS1, DAXX, PDX1/IPF1, GLI2 and GLI3. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349651 [Multi-domain]  Cd Length: 125  Bit Score: 45.86  E-value: 5.19e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 356 VAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRC----EHFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISL 431
Cdd:cd18342    9 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSpvfsAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPN 88

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 672078681 432 PPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEENA 468
Cdd:cd18342   89 LDKMADDLLAAADKYALERLKVMCEDALCSNLSVENA 125
BTB1_POZ_RhoBTB cd18299
first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 364-426 1.58e-05

first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Rho-related BTB domain-containing proteins (RhoBTB); RhoBTB proteins constitute a subfamily of atypical members within the Rho family of small guanosine triphosphatases (GTPases), which is characterized by containing a GTPase domain (in most cases, non-functional) followed by a proline-rich region, tandem BTB domains, and a conserved C-terminal region. In vertebrates, the RhoBTB subfamily consists of 3 isoforms: RhoBTB1, RhoBTB2, and RhoBTB3. Orthologs are present in several other eukaryotes, such as Drosophila and Dictyostelium, but have been lost in plants and fungi. This model corresponds to the first BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349608 [Multi-domain]  Cd Length: 103  Bit Score: 43.74  E-value: 1.58e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672078681 364 FDNPDTADLKFLVDGKY-IYAHKVLLKIRCEHFRSSLedSEDDIVEMSE-FSYPVFRAFLEYLYT 426
Cdd:cd18299    7 LHSPSCADVVFILQGGVrIFAHRIVLAAASSVFADLF--LMMTVVTLDSdITPEAFRRVLEFLYT 69
BTB_POZ_BAB-like cd18315
BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in ...
 370-443 2.14e-05

BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Drosophila melanogaster proteins bric-a-brac 1 (BAB1), bric-a-brac 2 (BAB2), modifier of mdg4 (doom), and similar proteins; BAB1 and BAB2 probably act as transcriptional regulators that are required for specification of the tarsal segment and are involved in antenna development. Doom is a product of the Drosophila mod(mdg4) gene. It induces apoptosis and binds to baculovirus inhibitor-of-apoptosis proteins. This subfamily also includes Drosophila melanogaster sex determination protein fruitless (FRU), protein jim lovell (LOV), zinc finger protein chinmo, transcription factor GAGA, transcription factor Ken, and longitudinals lacking proteins (LOLA). FRU probably acts as a transcriptional regulator that plays a role in male courtship behavior and sexual orientation, and enhances male-specific expression of takeout in brain-associated fat body. LOV, also called tyrosine kinase-related (TKR), has a regulatory role during midline cell development. Chinmo is a functional effector of the JAK/STAT pathway that regulates eye development, tumor formation, and stem cell self-renewal in Drosophila. GAGA is a transcriptional activator that functions by regulating chromatin structure. Ken, also termed protein Ken and Barbie, is a transcription factor required for Terminalia development. LOLA proteins are putative transcription factors required for axon growth and guidance in the central and peripheral nervous systems. Proteins in this subfamily contain a BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349624 [Multi-domain]  Cd Length: 85  Bit Score: 42.92  E-value: 2.14e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 672078681 370 ADLKFLVDGKYIYAHKVLLKIRCEHFRSSLED---SEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLA 443
Cdd:cd18315    2 VDVTLACEGGSLKAHKLVLAAASPYFAALLKEtppDEHPVIILPDVPYSELKALLDFIYTGEVNVSQEQLESLLKLA 78
BTB_POZ_KLHL35 cd18265
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-455 2.65e-05

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 35 (KLHL35); KLHL35 contains a BTB domain and kelch repeats, characteristics of a kelch family protein. Its function remains unclear. Significant differences in DNA methylation of the KLHL35 gene in abdominal aortic aneurysm (AAA) patients compared to non-AAA controls suggest a potential role in AAA pathology. Hypermethylation of the KLHL35 gene has also been associated with the development of hepatocellular carcinoma. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349574 [Multi-domain]  Cd Length: 128  Bit Score: 43.99  E-value: 2.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFRS----SLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFY 446
Cdd:cd18265   25 DVVLLVDGKDFPCHRATLSANSAYFRAmfggHLKESRQAVVEIQKVSAAAMEVLLDYMYGGGLRIQEDNVESVLEASDLL 104


                 ....*....
gi 672078681 447 SETRLKKLC 455
Cdd:cd18265  105 QVSKLREAC 113
BTB_POZ_ZBTB19_PATZ1 cd18207
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 383-461 4.09e-05

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1); PATZ1 is also called zinc finger and BTB domain-containing protein 19 (ZBTB19), BTB/POZ domain zinc finger transcription factor, protein kinase A RI subunit alpha-associated protein, zinc finger protein 278, or zinc finger sarcoma gene protein. It is an important transcriptional regulatory factor that regulates divergent pathways depending on the cellular context. For instance, it acts as a transcriptional suppressor that functions in T lymphocytes. It is also a DNA damage-responsive transcription factor that inhibits p53 function. It contains a BTB/POZ domain, a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349516 [Multi-domain]  Cd Length: 128  Bit Score: 43.41  E-value: 4.09e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 383 AHKVLLKIRCEHFRSSLEDSEDDI-----VEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFYSETRLKKLCQQ 457
Cdd:cd18207   41 AHRAVLAACSEYFESVFSAQEGDGgtpreLEMHTISSKVFGDILDFAYTSRIVVRLESFPELMTAAKFLLMRSVIDICQE 120


                 ....
gi 672078681 458 TIKQ 461
Cdd:cd18207  121 VIKQ 124
BTB_POZ_BTBD12_SLX4 cd18288
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 357-456 4.74e-05

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Structure-specific endonuclease subunit SLX4; SLX4, also called BTB/POZ domain-containing protein 12 (BTBD12), is a Holliday junction resolvase subunit that binds multiple DNA repair/recombination endonucleases and is required for DNA repair. Mutations of the SLX4 gene are found in Fanconi anemia. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349597 [Multi-domain]  Cd Length: 116  Bit Score: 42.84  E-value: 4.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 357 AESLKREFDNPDTADLKFLVD-GKYIYAHKVLLKIRCEHFRSSLEDS-----EDDI-----VEMSEFSYPVFRAFLEYLY 425
Cdd:cd18288    6 AADFSAMVNNPHLSDVQFQTDsGEVLYAHSFVLYARCPLLIQMVHSEgfsveEEGGvttrrVLLGDVSGEAARCFLQYLY 85

                         90       100       110
                 ....*....|....*....|....*....|.
gi 672078681 426 TDNISLPPEEAVGLLDLATFYSETRLKKLCQ 456
Cdd:cd18288   86 TADTGLPPGLSPHVSELADRFGVSELVHLCE 116
BTB_POZ_ZBTB17_MIZ1 cd18206
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-456 5.86e-05

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 17 (ZBTB17); ZBTB1 is also called c-Myc-interacting zinc finger protein 1 (Miz-1), zinc finger protein 151, or zinc finger protein 60. It is a poly-Cys2His2 zinc finger (ZF) transcription factor that can function as an activator or repressor depending on its binding partners, and by targeting negative regulators of cell cycle progression. ZBTB17 has been implicated in cardiomyopathy and is important in cardiac stress response. It contains a BTB/POZ domain, a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349515 [Multi-domain]  Cd Length: 112  Bit Score: 42.61  E-value: 5.86e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDsEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFYSETR 450
Cdd:cd18206   24 DCTFVVDGVDFKAHKAVLAACSEYFRMLFVD-QKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD 102


                 ....*.
gi 672078681 451 LKKLCQ 456
Cdd:cd18206  103 IVTACH 108
BTB_POZ_TDPOZ cd18344
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 351-468 5.93e-05

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in TD and POZ domain-containing proteins (TDPOZ); TDPOZ is a family of bipartite animal and plant proteins that contains a tumor necrosis factor receptor-associated factor (TRAF) domain (TD) and a POZ/BTB domain. TDPOZ proteins may be nuclear scaffold proteins probably involved in transcription regulation in early development and other cellular processes. This subfamily contains only mammalian members. Plant TDPOZ proteins contain a MATH domain at the N-terminal region and are named "BTB/POZ and MATH domain-containing proteins (BPM)", not included in this subfamily. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349653 [Multi-domain]  Cd Length: 128  Bit Score: 43.02  E-value: 5.93e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 351 DDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRS----SLEDSEDDIVEMSEFSYPVFRAFLEYLYT 426
Cdd:cd18344    5 DPRHMLTDDLGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAmfehEMEERLKNPIEIHDLDPQVFKEMMGFIYT 84

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 672078681 427 DNISLPPEE--AVGLLDLATFYSETRLKKLCQQTIKQGICEENA 468
Cdd:cd18344   85 GKAPHLHSHsmACDVLAAADKYGLEGLKVLCEDALCRNLSVENA 128
BTB_POZ_KBTBD2_BKLHD1 cd18270
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 354-472 6.37e-05

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch repeat and BTB domain-containing protein 2 (KBTBD2); KBTBD2, also called BTB and kelch domain-containing protein 1 (BKLHD1), plays an essential role in the regulation of insulin-signaling pathway. It is a BTB-Kelch family substrate recognition subunit of the Cullin-3-based E3 ubiquitin ligase, which targets p85alpha, the regulatory subunit of the phosphoinositol-3-kinase (PI3K) heterodimer, causing p85alpha ubiquitination and proteasome-mediated degradation. It contains a BTB domain and kelch repeats, characteristics of a kelch family protein. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349579 [Multi-domain]  Cd Length: 133  Bit Score: 43.07  E-value: 6.37e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 354 LTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFR----SSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNI 429
Cdd:cd18270   11 VSLLEQLKFFYEQQLLTDIVLIVEGTEFPCHKMVLATCSSYFRamfmSGLSESKQTHVHLRNVDAATLQIIITYAYTGNL 90

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 672078681 430 SLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEENAIALL 472
Cdd:cd18270   91 AINDSTVEQLYETACFLQVEDVLQRCREYLIKKINAENCVRLL 133
BTB_POZ_KBTBD4 cd18272
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 370-457 6.54e-05

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch repeat and BTB domain-containing protein 4 (KBTBD4); KBTBD4, also called BTB and kelch domain-containing protein 4 (BKLHD4), is a BTB-BACK-Kelch domain protein belonging to a large family of cullin-RING ubiquitin ligase adaptors that facilitate the ubiquitination of target substrates. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349581 [Multi-domain]  Cd Length: 140  Bit Score: 42.96  E-value: 6.54e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 370 ADLKFLVDGKYIYAHKVLLKIRCEHFRS----SLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATF 445
Cdd:cd18272   33 ADVTISVEGKEFQLHRLVLSAQSCFFRSmftsNLKEARNRVIELKDVSESVFQLLVDYIYHGTVKLRVEELQETYEVADM 112

                         90
                 ....*....|..
gi 672078681 446 YSETRLKKLCQQ 457
Cdd:cd18272  113 YQLTALFEECSR 124
BTB_POZ_BTBD3_6 cd18282
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 364-457 7.30e-05

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing proteins, BTBD3 and BTBD6; This family includes BTB/POZ domain-containing proteins BTBD3 and BTBD6, both of which are BTB-domain-containing Kelch-like proteins. BTBD3 controls dendrite orientation toward active axons in mammalian neocortex. BTBD6 is required for proper embryogenesis and plays an essential evolutionary conserved role during neuronal development. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349591 [Multi-domain]  Cd Length: 108  Bit Score: 42.00  E-value: 7.30e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 364 FDNPDTADLKFLVDGKY----IYAHKVLLKIRCE----HFRSSLEDSEDDIvEMSEFSYPVFRAFLEYLYTDNISLPPEE 435
Cdd:cd18282    2 FNNELMADVHFIVGPPGgtqrIPAHKYVLATGSSvfyaMFYGGLAENKNEI-EIPDVEPAAFLNLLRYLYCDEIDLEPDT 80

                         90       100
                 ....*....|....*....|..
gi 672078681 436 AVGLLDLATFYSETRLKKLCQQ 457
Cdd:cd18282   81 VLATLYAAKKYLVPHLARACVQ 102
BACK_IBtk cd18500
BACK (BTB and C-terminal Kelch) domain found in inhibitor of Bruton tyrosine kinase (IBtk); ...
 467-521 7.57e-05

BACK (BTB and C-terminal Kelch) domain found in inhibitor of Bruton tyrosine kinase (IBtk); IBtk is an inhibitor of Bruton's tyrosine kinase (Btk), thereby playing a role in B-cell development.


Pssm-ID: 350575  Cd Length: 60  Bit Score: 40.57  E-value: 7.57e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 672078681 467 NAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNfISKASR 521
Cdd:cd18500    5 NVAELLEFADIYNADQLKESCLQFICLNLETLLESRLLDNLDEDLLKE-LSKYYR 58
BTB_POZ_KBTBD11 cd18275
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-472 1.85e-04

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch repeat and BTB domain-containing protein 11 (KBTBD11); KBTBD11 is also called chronic myelogenous leukemia-associated protein (CMLAP) or Kelch domain-containing protein 7B, or KLHDC7C. It is a BTB-Kelch family protein whose function remains unclear. A novel polymorphism rs11777210 in KBTBD11 is significantly associated with colorectal cancer risk. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349584 [Multi-domain]  Cd Length: 104  Bit Score: 40.93  E-value: 1.85e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSLedsEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFYSETR 450
Cdd:cd18275    6 DLVIEVSGQRIRAHKSVLAAKSDYFRARL---SRDILKVKGLSYATLRLLVDYVYSGRMAVSKDNVVEVVAGARFLQMPC 82

                         90       100
                 ....*....|....*....|..
gi 672078681 451 LKKLCQQTIKQGICEENAIALL 472
Cdd:cd18275   83 AAQCAVDAVRAQLCLGNCYEVL 104
BTB_POZ_ZBTB44 cd18228
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-463 2.16e-04

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44); ZBTB44, also called BTB/POZ domain-containing protein 15 (BTBD15) or zinc finger protein 851 (ZNF851), may be involved in transcriptional regulation. Single-nucleotide polymorphisms of ZBTB44 showed a suggestive association with disease progression of Crohn's disease. ZBTB44 has also preferentially been recognized by sera of patients with peripheral T-cell lymphoma (PTCL). It contains a BTB/POZ domain, a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349537 [Multi-domain]  Cd Length: 126  Bit Score: 41.38  E-value: 2.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSL-----------EDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGL 439
Cdd:cd18228   21 DVTIRVQDKIFRAHKVVLAACSDFFRSKLvgqasprlvlvSPAGKCVLDLHHVTVTGFAPLLEYAYTSTLSINTENIIDV 100

                         90       100
                 ....*....|....*....|....
gi 672078681 440 LDLATFYSETRLKKLCQQTIKQGI 463
Cdd:cd18228  101 LAAASYMQMFNVANTCSEFMKSSI 124
BACK_ABTB1_BPOZ cd18497
BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing ...
 463-507 2.20e-04

BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1); ABTB1, also called elongation factor 1A-binding protein, or Bood POZ containing gene type 1 (BPOZ-1), is an anti-proliferative factor that may act as a mediator of the phosphatase and tensin homologue (PTEN) growth-suppressive signaling pathway. It may play a role in developmental processes.


Pssm-ID: 350572  Cd Length: 72  Bit Score: 39.84  E-value: 2.20e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 672078681 463 ICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEM 507
Cdd:cd18497    1 LDEDNVIDVLRTARLFNLPRLEDQCTEFMAKNLEELVDDEEFAEL 45
PHA03098 PHA03098
kelch-like protein; Provisional
 374-513 2.25e-04

kelch-like protein; Provisional


Pssm-ID: 222983 [Multi-domain]  Cd Length: 534  Bit Score: 43.99  E-value: 2.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 374 FLVDGKYIYAHKVLLKIRCEHFRSSLED--SEDDIveMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFYSETRL 451
Cdd:PHA03098  16 IVNGGGIIKVHKIILSSSSEYFKKMFKNnfKENEI--NLNIDYDSFNEVIKYIYTGKINITSNNVKDILSIANYLIIDFL 93

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672078681 452 KKLCQQTIKQGICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVtqtsgfaEMDHDLLK 513
Cdd:PHA03098  94 INLCINYIIKIIDDNNCIDIYRFSFFYGCKKLYSAAYNYIRNNIELI-------YNDPDFIY 148
BTB_POZ_ZBTB35_ZNF131 cd18221
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 361-437 2.44e-04

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131); ZNF131, also called zinc finger and BTB domain-containing protein 35 (ZBTB35), is a transcriptional activator implicated as a regulator of Kaiso-mediated biological processes. It regulates cell growth of developing and mature T cells. It inhibits estrogen signaling by suppressing estrogen receptor alpha homo-dimerization, and plays a role in breast cancer cell proliferation. It contains a BTB/POZ domain, a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349530 [Multi-domain]  Cd Length: 113  Bit Score: 40.75  E-value: 2.44e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 672078681 361 KREFDNpdTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLED-SEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAV 437
Cdd:cd18221   12 QRELDQ--FTDITLIVDGHQFKAHKAVLAACSQFFYKFFQDfTQEPLVEIEGVSNMAFRHLIEFTYTAKLMVQGEEEA 87
BTB2_POZ_RHOBTB1 cd18358
second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 353-457 3.79e-04

second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Rho-related BTB domain-containing protein 1 (RhoBTB1); RhoBTB1 is an atypical Rho family small guanosine triphosphatase (GTPase) and is a member of the RhoBTB subfamily, which is characterized by containing a GTPase domain (in most cases, non-functional) followed by a proline-rich region, tandem BTB domains, and a conserved C-terminal region. The carboxyl terminal extension that harbors two BTB domains is capable of assembling cullin 3-dependent ubiquitin ligase complexes. RhoBTB1 functions as a tumor suppressor that regulates the integrity of the Golgi complex through the methyltransferase METTL7B. It also acts an adaptor of the Cullin-3-dependent E3 ubiquitin ligase complex. This model corresponds to the second BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349667 [Multi-domain]  Cd Length: 126  Bit Score: 40.33  E-value: 3.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 353 HLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCE----HFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDN 428
Cdd:cd18358    4 HVRKANRIKECLSKGTFSDVTFKLDDGTINAHKPLLICSCEwmaaMFGGSFIESANSEVVLPNISKVSMQAVLDYLYTKQ 83

                         90       100       110
                 ....*....|....*....|....*....|...
gi 672078681 429 IS----LPPEEavgLLDLATFYSETRLKKLCQQ 457
Cdd:cd18358   84 LSptadLDPLE---LIALANRFCLPHLVALTEQ 113
BTB_POZ_ZBTB37 cd18222
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-463 4.58e-04

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 37 (ZBTB37); ZBTB37 may be involved in transcriptional regulation. It is differentially expressed in aryl hydrocarbon receptor (AhR)-KO mice compared with WT mice, and may potentially contribute to the aging phenotype of AhR-KO mice. It contains a BTB/POZ domain, a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349531 [Multi-domain]  Cd Length: 123  Bit Score: 40.03  E-value: 4.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDSEDDIVEMSEFSYP-VFRAFLEYLYTDNISLPPEEAVGLLDLATFYSET 449
Cdd:cd18222   27 DIVVNVQGQSFRAHKVVLAASSPYFRDHMSLNEMSTVSISVIKNPtVFEQLLSFCYTGRICLQLADIISYLTAASFLQMQ 106

                         90
                 ....*....|....
gi 672078681 450 RLKKLCQQtIKQGI 463
Cdd:cd18222  107 HIIDKCTQ-ILEGI 119
BTB_POZ_M2BP cd18304
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 354-457 6.89e-04

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Mac-2-binding protein (MAC2BP/M2BP); M2BP is also called galectin-3-binding protein, basement membrane autoantigen p105, lectin galactoside-binding soluble 3-binding protein (LGALS3BP), or tumor-associated antigen 90K. It promotes integrin-mediated cell adhesion and may stimulate host defense against viruses and tumor cells. It contains a scavenger receptor cysteine-rich domain, followed by BTB and BACK domains. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349613 [Multi-domain]  Cd Length: 114  Bit Score: 39.39  E-value: 6.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 354 LTVAESLKREFDNPDTADLKFLV-------DGKYIYAHKVLLKIRCEHFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYT 426
Cdd:cd18304    2 MELSEDLGLLYDSQQGCDFNISVltaggeeEELTFCAHRVILMLSPEANFLHKTGSSNITLDVDEECLPHVPDFLRYFYT 81

                         90       100       110
                 ....*....|....*....|....*....|.
gi 672078681 427 DNISLPPEEAVGLLDLATFYSETRLKKLCQQ 457
Cdd:cd18304   82 RQIDITLTSVKCFHKLASIYGVRKLREYCGQ 112
BTB_POZ_BTBD3 cd18348
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 355-472 7.67e-04

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 3 (BTBD3); BTBD3 is a BTB-domain-containing Kelch-like protein that controls dendrite orientation toward active axons in the mammalian neocortex. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349657 [Multi-domain]  Cd Length: 131  Bit Score: 39.62  E-value: 7.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 355 TVAESLKREFDNPDTADLKFLVD----GKYIYAHKVLLKIRCEHFRSSL--EDSED-DIVEMSEFSYPVFRAFLEYLYTD 427
Cdd:cd18348    7 TIRERNAVMFNNDLMADIHFVVGppggTQRLPGHKYVLAVGSSVFHAMFygELAEDkDEIRIPDVEPAAFLAMLKYIYCD 86

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 672078681 428 NISLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEENAIALL 472
Cdd:cd18348   87 EIDLAADTVLATLYAAKKYIVPHLARACVNFLETSLSAKNACVLL 131
BTB1_POZ_BTBD8 cd18285
first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 370-437 9.82e-04

first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8); BTBD8 is a BTB-domain-containing Kelch-like protein that may play a role in developmental processes. It may also act as a protein-protein adaptor in a transcription complex and thus be involved in brain development. BTBD8 contains two BTB domains. This model corresponds to the first domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349594 [Multi-domain]  Cd Length: 104  Bit Score: 38.87  E-value: 9.82e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 672078681 370 ADLKFLVDGKYIYAHKVLLKIRCEHF-------RSSLEDseDDIVEMSEFSYPVFRAFLEYLYTD--NISLPPEEAV 437
Cdd:cd18285   16 TDVTFYVGSTLFKAHKAILLARVPEFfshiigkLSSLED--QEPINIENLEASEFKTFLRQVYTSdkNIKMLEEEIL 90
BTB_POZ_BTBD6 cd18349
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 364-455 1.05e-03

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 6 (BTBD6); BTBD6, also termed lens BTB domain protein, is a BTB-domain-containing Kelch-like protein required for proper embryogenesis and plays an essential evolutionary conserved role during neuronal development. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349658 [Multi-domain]  Cd Length: 109  Bit Score: 38.81  E-value: 1.05e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 364 FDNPDTADLKFLV----DGKYIYAHKVLL----KIRCEHFRSSLEDSEDDIvEMSEFSYPVFRAFLEYLYTDNISLPPEE 435
Cdd:cd18349    3 FNNELMADVHFIVgppgASQRVPAHKYVLavgsSVFYAMFYGDLAEVKSEI-HIPDVEPAAFLILLKYMYSDEIDLEADT 81

                         90       100
                 ....*....|....*....|
gi 672078681 436 AVGLLDLATFYSETRLKKLC 455
Cdd:cd18349   82 VLATLYAAKKYIVPALAKAC 101
BTB_POZ_KLHL22 cd18251
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-467 1.19e-03

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 22 (KLHL22); KLHL22 is a substrate-specific adaptor of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex required for chromosome alignment and localization of polo-like kinase 1 (PLK1) at kinetochores. The BCR(KLHL22) ubiquitin ligase complex mediates mono-ubiquitination of PLK1, leading to PLK1 dissociation from phosphoreceptor proteins and subsequent removal from kinetochores, allowing silencing of the spindle assembly checkpoint (SAC) and chromosome segregation. It contains a BTB domain and kelch repeats, characteristics of a kelch family protein. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349560 [Multi-domain]  Cd Length: 125  Bit Score: 39.03  E-value: 1.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFR----SSLEDSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFY 446
Cdd:cd18251   25 DVVLVVEGKPIEAHRILLAASCDYFRgmfaGGLREMQQTEVLIHGVSYNAMCKILDFIYTSELELSLDNVQETLTAACQL 104

                         90       100
                 ....*....|....*....|.
gi 672078681 447 SETRLKKLCQQTIKQGICEEN 467
Cdd:cd18251  105 QIPEVIGFCCDFLMSWVDNEN 125
BTB_POZ_BTBD2 cd18347
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 355-467 1.35e-03

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 2 (BTBD2); BTBD2 is a BTB-domain-containing Kelch-like protein that interacts with DNA topoisomerase 1 (Topo1), a key enzyme of cell survival. BTBD1 and BTBD2 colocalize to cytoplasmic bodies with the RBCC/tripartite motif protein, TRIM5delta. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349656 [Multi-domain]  Cd Length: 127  Bit Score: 38.90  E-value: 1.35e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 355 TVAESLKREFDNPDTADLKFLV----DGKYIYAHKVLLKIRCEHFRSSLED---SEDDIVEMSEFSYPVFRAFLEYLYTD 427
Cdd:cd18347    8 TVQERFAFLFNNEVLSDVHFLVgkglGSQRIPAHRFVLAVGSAVFDAMFNGgmaTTSTEIELPDVEPAAFLALLKFLYSD 87

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 672078681 428 NISLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEEN 467
Cdd:cd18347   88 EVQIGPETVMTTLYTAKKYAVPALEAHCVEFLKKNLRADN 127
BACK smart00875
BTB And C-terminal Kelch; The BACK domain is found juxtaposed to the BTB domain; they are ...
 468-517 1.80e-03

BTB And C-terminal Kelch; The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues.


Pssm-ID: 197943 [Multi-domain]  Cd Length: 101  Bit Score: 38.09  E-value: 1.80e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 672078681   468 AIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFIS 517
Cdd:smart00875   1 CLGIRRFADAHGLEELAEKALRFILQNFSEVSSSEEFLELPLEQLLELLS 50
BTB1_POZ_IBtk cd18301
first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain ...
 371-437 2.94e-03

first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in inhibitor of Bruton tyrosine kinase (IBtk); IBtk is an inhibitor or negative regulator of Bruton tyrosine kinase (Btk), which is required for B-cell differentiation and development. IBtk binds to the PH domain of Btk and down-regulates the Btk kinase activity. It contains two BTB domains. This model corresponds to the first BTB domain. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349610 [Multi-domain]  Cd Length: 99  Bit Score: 37.27  E-value: 2.94e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFR----SSLEDSED----DIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAV 437
Cdd:cd18301   20 DVVFQVGGKTFPAHKFILASRSDYFRklflSSLLTSEDavgcDVVHIEKVPPEIFEQLLQFIYTDTCDLLTDGYK 94
BTB_POZ_KBTBD3_BKLHD3 cd18271
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-455 2.96e-03

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch repeat and BTB domain-containing protein 3 (KBTBD3); KBTBD3, also called BTB and kelch domain-containing protein 3 (BKLHD3), contains a BTB domain and kelch repeats, characteristics of a kelch family protein. Its function remains unclear. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349580 [Multi-domain]  Cd Length: 130  Bit Score: 37.89  E-value: 2.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSLE----DSEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFY 446
Cdd:cd18271   26 DFNIIVKDETIPCHRCVLAACSDFFRAMFEvnmkERDDGSVTISNLSPKAVKAFLDYAYTGKAEITDDNVEMFFQMSSFL 105


                 ....*....
gi 672078681 447 SETRLKKLC 455
Cdd:cd18271  106 QVSLLSKAC 114
RCC1_2 pfam13540
Regulator of chromosome condensation (RCC1) repeat;
185-212 3.46e-03

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 463914 [Multi-domain]  Cd Length: 30  Bit Score: 35.09  E-value: 3.46e-03
                          10        20
                  ....*....|....*....|....*...
gi 672078681  185 SIACGQMCSMAVVDTGEVYVWGYNGNGQ 212
Cdd:pfam13540   3 SVAAGDNHTLALTSDGRVYCWGDNSYGQ 30
BACK_BTBD19 cd18494
BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 19 (BTBD19); ...
 466-512 5.98e-03

BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 19 (BTBD19); BTBD19 is a BTB-domain-containing Kelch-like protein. Its function remains unclear.


Pssm-ID: 350569  Cd Length: 73  Bit Score: 35.75  E-value: 5.98e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 672078681 466 ENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLL 512
Cdd:cd18494    3 ETACEALQAAVTYGQDELKERCLAFIEEHTEEVFKTKGFHELSDEAL 49
RCC1_2 pfam13540
Regulator of chromosome condensation (RCC1) repeat;
76-106 6.83e-03

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 463914 [Multi-domain]  Cd Length: 30  Bit Score: 34.32  E-value: 6.83e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 672078681   76 IASLSYGSGpHIVLATTDGEVFTWGHNAYSQ 106
Cdd:pfam13540   1 VVSVAAGDN-HTLALTSDGRVYCWGDNSYGQ 30
BTB_POZ_ZBTB11 cd18202
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 354-430 7.96e-03

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 11 (ZBTB11); ZBTB11 is a transcriptional repressor of TP53. It is critical for basal and emergency granulopoiesis. It regulates neutrophil development through its integrase-like zinc finger domain. ZBTB11 contains a BTB/POZ domain, a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349511 [Multi-domain]  Cd Length: 118  Bit Score: 36.37  E-value: 7.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 354 LTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLED-----SEDDIVEMSEFSYPVFRAFLEYLYTDN 428
Cdd:cd18202    4 QTVLDQLNQQRLNNQFCDVTLLIEGEEYKAHKSVLAANSEYFRELFIEkgavsSHEAVVDLSGFCKSSFLPLLEFAYTSE 83


                 ..
gi 672078681 429 IS 430
Cdd:cd18202   84 LT 85
BTB_POZ_KLHL34 cd18264
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in ...
 371-469 8.12e-03

BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 34 (KLHL34); KLHL34 contains a BTB domain and kelch repeats, characteristics of a kelch family protein. Its function remains unclear. The methylation status of KLHL34 cg14232291 appears to be predictive of pathologic response to preoperative chemoradiation therapy in rectal cancer patients. The BTB/POZ domain is a common protein-protein interaction motif of about 100 amino acids.


Pssm-ID: 349573 [Multi-domain]  Cd Length: 136  Bit Score: 36.70  E-value: 8.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672078681 371 DLKFLVDGKYIYAHKVLLKIRCEHFRSSLED----SEDDIVEMSEFSYPVFRAFLEYLYTDNISLPPEEAVGLLDLATFY 446
Cdd:cd18264   30 DVVLEAEGNEFPAHRSLLACSSDYFRALFKDytqeSKARVIHLPVVSAAGLQRVLDFIYTSWLSLSLDTLEDTLEAASYL 109

                         90       100
                 ....*....|....*....|...
gi 672078681 447 SETRLKKLCQQTIKQGICEENAI 469
Cdd:cd18264  110 QVTEAIGLCSQYLINNLAPENCC 132
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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