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Conserved domains on  [gi|1034590030|ref|XP_011519668|]
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bromo adjacent homology domain-containing 1 protein isoform X1 [Homo sapiens]

Protein Classification

BAH_BAHCC1 domain-containing protein( domain architecture ID 10140545)

BAH_BAHCC1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BAH_BAHCC1 cd04714
BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. ...
 675-785 3.20e-52

BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


:

Pssm-ID: 240065  Cd Length: 121  Bit Score: 177.59  E-value: 3.20e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 675 GETIRVRDTVLLKSGPRKtSTPYVAKISALWENPEsGELMMSLLWYYRPEHLQGGRSPSMHEplqNEVFASRHQDQNSVA 754
Cdd:cd04714     1 KEIIRVGDCVLFKSPGRP-SLPYVARIESLWEDPE-GNMVVRVKWYYRPEETKGGRKPNHGE---KELFASDHQDENSVQ 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1034590030 755 CIEEKCYVLTFAEY---------------CRFCAMAKRRGEGLPSR 785
Cdd:cd04714    76 TIEHKCYVLTFAEYerlarvkkkpqdgvdFYYCAGTYNPDTGMLKC 121
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 329-597 7.63e-03

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 7.63e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  329 GCPDEPWPSATPCGPSVQPSHQPLSKALES--------PLGLRPHLPLLMGGQAALKPEPGRPGEESPAPKQELHQ---- 396
Cdd:PHA03247  2590 DAPPQSARPRAPVDDRGDPRGPAPPSPLPPdthapdppPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRrarr 2669

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  397 PSFPTPQLSPLPMPGNPADYNGlcVGPeLTALGSFYLYCGQEGLQCGGYSPCPMLPEGKLSPVAAPHEEGLLLAPSSVPS 476
Cdd:PHA03247  2670 LGRAAQASSPPQRPRRRAARPT--VGS-LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPA 2746

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  477 GTPFqhpPWGSSRYCSSEDTGVngysicgvlPLSVTHAGTTCGGCPYKMPFAAEGCRSLGQLEFPLPEAghPASPAHPLL 556
Cdd:PHA03247  2747 GPAT---PGGPARPARPPTTAG---------PPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWD--PADPPAAVL 2812

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....
gi 1034590030  557 GcPVPSVPPAAEPVPHLQTPTSEPQT---VARACPQSAKPPSGS 597
Cdd:PHA03247  2813 A-PAAALPPAASPAGPLPPPTSAQPTappPPPGPPPPSLPLGGS 2855
 
Name Accession Description Interval E-value
BAH_BAHCC1 cd04714
BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. ...
 675-785 3.20e-52

BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240065  Cd Length: 121  Bit Score: 177.59  E-value: 3.20e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 675 GETIRVRDTVLLKSGPRKtSTPYVAKISALWENPEsGELMMSLLWYYRPEHLQGGRSPSMHEplqNEVFASRHQDQNSVA 754
Cdd:cd04714     1 KEIIRVGDCVLFKSPGRP-SLPYVARIESLWEDPE-GNMVVRVKWYYRPEETKGGRKPNHGE---KELFASDHQDENSVQ 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1034590030 755 CIEEKCYVLTFAEY---------------CRFCAMAKRRGEGLPSR 785
Cdd:cd04714    76 TIEHKCYVLTFAEYerlarvkkkpqdgvdFYYCAGTYNPDTGMLKC 121
BAH pfam01426
BAH domain; This domain has been called BAH (Bromo adjacent homology) domain and has also been ...
 676-792 2.38e-16

BAH domain; This domain has been called BAH (Bromo adjacent homology) domain and has also been called ELM1 and BAM (Bromo adjacent motif) domain. The function of this domain is unknown but may be involved in protein-protein interaction.


Pssm-ID: 460207  Cd Length: 120  Bit Score: 75.81  E-value: 2.38e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 676 ETIRVRDTVLLKSGPrKTSTPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEplqNEVFASRHQDQNSVAC 755
Cdd:pfam01426   1 ETYSVGDFVLVEPDD-ADEPYYVARIEELFEDTKNGKKMVRVQWFYRPEETVHRAGKAFNK---DELFLSDEEDDVPLSA 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1034590030 756 IEEKCYVLTFAEYCRFCAMAKRRGEGL-------PSRKTALVPP 792
Cdd:pfam01426  77 IIGKCSVLHKSDLESLDPYKIKEPDDFfcellydPKTKSFKKLP 120
BAH smart00439
Bromo adjacent homology domain;
677-780 1.49e-15

Bromo adjacent homology domain;


Pssm-ID: 214664 [Multi-domain]  Cd Length: 121  Bit Score: 73.48  E-value: 1.49e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  677 TIRVRDTVLLKSgPRKTSTPYVAKISALWENPESGELMMSLL-WYYRPEHLQGGRSPSMHEplqNEVFASRHQDQNSVAC 755
Cdd:smart00439   1 TISVGDFVLVEP-DDADEPYYIGRIEEIFETKKNSESKMVRVrWFYRPEETVLEKAALFDK---NEVFLSDEYDTVPLSD 76

                           90       100
                   ....*....|....*....|....*
gi 1034590030  756 IEEKCYVLTFAEYCRFCAMAKRRGE 780
Cdd:smart00439  77 IIGKCNVLYKSDYPGLRPEGSIGEP 101
PHA03247 PHA03247
large tegument protein UL36; Provisional
 329-597 7.63e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 7.63e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  329 GCPDEPWPSATPCGPSVQPSHQPLSKALES--------PLGLRPHLPLLMGGQAALKPEPGRPGEESPAPKQELHQ---- 396
Cdd:PHA03247  2590 DAPPQSARPRAPVDDRGDPRGPAPPSPLPPdthapdppPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRrarr 2669

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  397 PSFPTPQLSPLPMPGNPADYNGlcVGPeLTALGSFYLYCGQEGLQCGGYSPCPMLPEGKLSPVAAPHEEGLLLAPSSVPS 476
Cdd:PHA03247  2670 LGRAAQASSPPQRPRRRAARPT--VGS-LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPA 2746

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  477 GTPFqhpPWGSSRYCSSEDTGVngysicgvlPLSVTHAGTTCGGCPYKMPFAAEGCRSLGQLEFPLPEAghPASPAHPLL 556
Cdd:PHA03247  2747 GPAT---PGGPARPARPPTTAG---------PPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWD--PADPPAAVL 2812

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....
gi 1034590030  557 GcPVPSVPPAAEPVPHLQTPTSEPQT---VARACPQSAKPPSGS 597
Cdd:PHA03247  2813 A-PAAALPPAASPAGPLPPPTSAQPTappPPPGPPPPSLPLGGS 2855
 
Name Accession Description Interval E-value
BAH_BAHCC1 cd04714
BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. ...
 675-785 3.20e-52

BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240065  Cd Length: 121  Bit Score: 177.59  E-value: 3.20e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 675 GETIRVRDTVLLKSGPRKtSTPYVAKISALWENPEsGELMMSLLWYYRPEHLQGGRSPSMHEplqNEVFASRHQDQNSVA 754
Cdd:cd04714     1 KEIIRVGDCVLFKSPGRP-SLPYVARIESLWEDPE-GNMVVRVKWYYRPEETKGGRKPNHGE---KELFASDHQDENSVQ 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1034590030 755 CIEEKCYVLTFAEY---------------CRFCAMAKRRGEGLPSR 785
Cdd:cd04714    76 TIEHKCYVLTFAEYerlarvkkkpqdgvdFYYCAGTYNPDTGMLKC 121
BAH cd04370
BAH, or Bromo Adjacent Homology domain (also called ELM1 and BAM for Bromo Adjacent Motif). ...
 675-781 4.05e-18

BAH, or Bromo Adjacent Homology domain (also called ELM1 and BAM for Bromo Adjacent Motif). BAH domains have first been described as domains found in the polybromo protein and Yeast Rsc1/Rsc2 (Remodeling of the Structure of Chromatin). They also occur in mammalian DNA methyltransferases and the MTA1 subunits of histone deacetylase complexes. A BAH domain is also found in Yeast Sir3p and in the origin receptor complex protein 1 (Orc1p), where it was found to interact with the N-terminal lobe of the silence information regulator 1 protein (Sir1p), confirming the initial hypothesis that BAH plays a role in protein-protein interactions.


Pssm-ID: 239835 [Multi-domain]  Cd Length: 123  Bit Score: 80.90  E-value: 4.05e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 675 GETIRVRDTVLLKSGPRKTS-TPYVAKISALWENPEsGELMMSLLWYYRPEHLQGGRSPSMhepLQNEVFASRHQDQNSV 753
Cdd:cd04370     1 GITYEVGDSVYVEPDDSIKSdPPYIARIEELWEDTN-GSKQVKVRWFYRPEETPKGLSPFA---LRRELFLSDHLDEIPV 76

                          90       100
                  ....*....|....*....|....*...
gi 1034590030 754 ACIEEKCYVLTFAEYCRFCAMAKRRGEG 781
Cdd:cd04370    77 ESIIGKCKVLFVSEFEGLKQRPNKIDTD 104
BAH pfam01426
BAH domain; This domain has been called BAH (Bromo adjacent homology) domain and has also been ...
 676-792 2.38e-16

BAH domain; This domain has been called BAH (Bromo adjacent homology) domain and has also been called ELM1 and BAM (Bromo adjacent motif) domain. The function of this domain is unknown but may be involved in protein-protein interaction.


Pssm-ID: 460207  Cd Length: 120  Bit Score: 75.81  E-value: 2.38e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 676 ETIRVRDTVLLKSGPrKTSTPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEplqNEVFASRHQDQNSVAC 755
Cdd:pfam01426   1 ETYSVGDFVLVEPDD-ADEPYYVARIEELFEDTKNGKKMVRVQWFYRPEETVHRAGKAFNK---DELFLSDEEDDVPLSA 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1034590030 756 IEEKCYVLTFAEYCRFCAMAKRRGEGL-------PSRKTALVPP 792
Cdd:pfam01426  77 IIGKCSVLHKSDLESLDPYKIKEPDDFfcellydPKTKSFKKLP 120
BAH smart00439
Bromo adjacent homology domain;
677-780 1.49e-15

Bromo adjacent homology domain;


Pssm-ID: 214664 [Multi-domain]  Cd Length: 121  Bit Score: 73.48  E-value: 1.49e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  677 TIRVRDTVLLKSgPRKTSTPYVAKISALWENPESGELMMSLL-WYYRPEHLQGGRSPSMHEplqNEVFASRHQDQNSVAC 755
Cdd:smart00439   1 TISVGDFVLVEP-DDADEPYYIGRIEEIFETKKNSESKMVRVrWFYRPEETVLEKAALFDK---NEVFLSDEYDTVPLSD 76

                           90       100
                   ....*....|....*....|....*
gi 1034590030  756 IEEKCYVLTFAEYCRFCAMAKRRGE 780
Cdd:smart00439  77 IIGKCNVLYKSDYPGLRPEGSIGEP 101
BAH_polybromo cd04717
BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human ...
 675-770 1.62e-13

BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human polybromo protein (BAF180) is a component of the SWI/SNF chromatin-remodeling complex PBAF. It is thought that polybromo participates in transcriptional regulation. Saccharomyces cerevisiae RSC1 and RSC2 are part of the 15-subunit nucleosome remodeling RSC complex. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240068  Cd Length: 121  Bit Score: 67.61  E-value: 1.62e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 675 GETIRVRDTVLLKSgPRKTSTPYVAKISALWENPEsGELMMSLLWYYRPEHlqggrspSMHEP----LQNEVFASRHQDQ 750
Cdd:cd04717     1 GLQYRVGDCVYVAN-PEDPSKPIIFRIERLWKDED-GEKFFFGCWFYRPEE-------TFHEPtrkfYKNEVFKSPLYET 71

                          90       100
                  ....*....|....*....|
gi 1034590030 751 NSVACIEEKCYVLTFAEYCR 770
Cdd:cd04717    72 VPVEEIVGKCAVMDVKDYIK 91
BAH_plant_3 cd04713
BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH ...
 665-821 9.82e-13

BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240064  Cd Length: 146  Bit Score: 66.33  E-value: 9.82e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 665 RKSYQAVERHGETIRVRDTVLLKsgPRKTSTPYVAKISALWENpESGELMMSLLWYYRPEHLQGGRSPSMHEPLQNEVFA 744
Cdd:cd04713     8 KCHYTSFEKDGNKYRLEDCVLLV--PEDDQKPYIAIIKDIYKQ-EEGSLKLEVQWLYRPEEIEKKKGGNWKAEDPRELFY 84

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034590030 745 SRHQDQNSVACIEEKCYVlTFAeycrfcamakRRGEGLPSRKTAlvpPSadystpphrtvpedtdpelvFLCRHVYD 821
Cdd:cd04713    85 SFHRDEVPAESVLHPCKV-AFV----------PKGKQIPLRKGH---SG--------------------FIVRRVYD 127
BAH_Orc1p_like cd04715
BAH, or Bromo Adjacent Homology domain, as present in the Schizosaccharomyces pombe homolog of ...
 666-770 5.21e-08

BAH, or Bromo Adjacent Homology domain, as present in the Schizosaccharomyces pombe homolog of Saccharomyces cerevisiae Orc1p and similar proteins. Orc1 is part of the Yeast Sir1-origin recognition complex, the Orc1p BAH doman functions in epigenetic silencing. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240066  Cd Length: 159  Bit Score: 52.89  E-value: 5.21e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 666 KSYQAVERHGETIRVRDTVLLKSGprkTSTPYVAKISALWENP-ESGELMMSLLWYYRPEHLQGGRSPsMHEPLQNEVFA 744
Cdd:cd04715    18 QFYRSFTYDGVEYRLYDDVYVHNG---DSEPYIGKIIKIYETAiDSGKKKVKVIWFFRPSEIRMELKG-EPKRHINEVFL 93

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1034590030 745 SRHQDQ-----NSVACIEEKCYVLTFAEYCR 770
Cdd:cd04715    94 ACGRGEglaniNLLESIIGKCNVVCISEDFR 124
BAH_plant_1 cd04721
BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH ...
 673-776 4.97e-05

BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240072  Cd Length: 130  Bit Score: 43.59  E-value: 4.97e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 673 RHGETIRVRDTVLLKSGPRKTstpYVAKISALWENpESGELMMSLLWYYRPEHLQGGRSPSMHEPlqNEVFASRHQDQNS 752
Cdd:cd04721     3 RNGVTISVHDFVYVLSEEEDR---YVAYIEDLYED-KKGSKMVKVRWFHTTDEVGAALSPDSVNP--REIFLSPNLQVIS 76

                          90       100
                  ....*....|....*....|....
gi 1034590030 753 VACIEEKCYVLTFAEYCRFCAMAK 776
Cdd:cd04721    77 VECIDGLATVLTREHYEKFQSVPK 100
BAH_plantDCM_I cd04716
BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5) ...
 675-763 2.31e-04

BAH, or Bromo Adjacent Homology domain, first copy present in DNA (Cytosine-5)-methyltransferases (DCM) from plants. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the genome. These effects include transcriptional repression via inhibition of transcription factor binding, the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting, and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240067  Cd Length: 122  Bit Score: 41.66  E-value: 2.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 675 GETIRVRDTVLLKSGPRKTstPYVAKISALWENPEsGELMMSLLWYYRPEHLQGGRSPSMHEPlqNEVFASRHQDQNSVA 754
Cdd:cd04716     1 GITYNLGDDAYVQGGEGEE--PFICKITEFFEGTD-GKTYFTAQWFYRAEDTVIERQATNHDK--KRVFYSEIKNDNPLD 75


                  ....*....
gi 1034590030 755 CIEEKCYVL 763
Cdd:cd04716    76 CLISKVKIL 84
BAH_MTA cd04709
BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The ...
 679-767 6.53e-04

BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240060  Cd Length: 164  Bit Score: 41.22  E-value: 6.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 679 RVRDTVLLKSGPrktSTPYV-AKISALWENPeSGELMMSLLWYYR----PEHL-------------QGGRSPSM--HEPL 738
Cdd:cd04709     5 RVGDYVYFESSP---NNPYLiRRIEELNKTA-RGHVEAKVVCYYRrrdiPDSLyqladqhrreleeKSDDLTPKqrHQLR 80

                          90       100
                  ....*....|....*....|....*....
gi 1034590030 739 QNEVFASRHQDQNSVACIEEKCYVLTFAE 767
Cdd:cd04709    81 HRELFLSRQVETLPATHIRGKCSVTLLND 109
BAH_Orc1p_Yeast cd04720
BAH, or Bromo Adjacent Homology domain, as present in Orc1p, which again is part of the ...
 675-821 1.91e-03

BAH, or Bromo Adjacent Homology domain, as present in Orc1p, which again is part of the Saccharomyces cerevisiae Sir1-origin recognition complex, and as present in Sir3p. The Orc1p BAH doman functions in epigenetic silencing. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240071  Cd Length: 179  Bit Score: 40.09  E-value: 1.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 675 GETIRVRDTVLLKSGPrkTSTPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMHEPL------QNEVFASRHQ 748
Cdd:cd04720    50 GLELSVGDTILVKDDV--ANSPSVYLIHEIRLNTLNNEVELWVMWFLRWFEINPARYYKQFDPEfrsesnKNELYLTAEL 127

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034590030 749 DQNSVACIEEKCYVLTFAEYcrfcamakrrgeglpsrktalvppsadystppHRTVPEDTDPELVFLCRHVYD 821
Cdd:cd04720   128 SEIKLKDIIDKANVLSESEF--------------------------------NDLSTDDKNGERTFFCRYACE 168
BAH_fungalPHD cd04710
BAH, or Bromo Adjacent Homology domain, as present in fungal proteins containing PHD domains. ...
 673-762 1.94e-03

BAH, or Bromo Adjacent Homology domain, as present in fungal proteins containing PHD domains. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.


Pssm-ID: 240061  Cd Length: 135  Bit Score: 39.28  E-value: 1.94e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030 673 RHGETIRVRDTVLLKSGPrkTSTPY-VAKISALWENPE-----------SGELMMSLLWYYRPEHLQggRSPSMHEPLqn 740
Cdd:cd04710     7 KNGELLKVNDHIYMSSEP--PGEPYyIGRIMEFVPKHEfpsgiharvfpASYFQVRLNWYYRPRDIS--RRVVADSRL-- 80

                          90       100
                  ....*....|....*....|..
gi 1034590030 741 eVFASRHQDQNSVACIEEKCYV 762
Cdd:cd04710    81 -LYASMHSDICPIGSVRGKCTV 101
PHA03247 PHA03247
large tegument protein UL36; Provisional
 329-597 7.63e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 7.63e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  329 GCPDEPWPSATPCGPSVQPSHQPLSKALES--------PLGLRPHLPLLMGGQAALKPEPGRPGEESPAPKQELHQ---- 396
Cdd:PHA03247  2590 DAPPQSARPRAPVDDRGDPRGPAPPSPLPPdthapdppPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRrarr 2669

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  397 PSFPTPQLSPLPMPGNPADYNGlcVGPeLTALGSFYLYCGQEGLQCGGYSPCPMLPEGKLSPVAAPHEEGLLLAPSSVPS 476
Cdd:PHA03247  2670 LGRAAQASSPPQRPRRRAARPT--VGS-LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPA 2746

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590030  477 GTPFqhpPWGSSRYCSSEDTGVngysicgvlPLSVTHAGTTCGGCPYKMPFAAEGCRSLGQLEFPLPEAghPASPAHPLL 556
Cdd:PHA03247  2747 GPAT---PGGPARPARPPTTAG---------PPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWD--PADPPAAVL 2812

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....
gi 1034590030  557 GcPVPSVPPAAEPVPHLQTPTSEPQT---VARACPQSAKPPSGS 597
Cdd:PHA03247  2813 A-PAAALPPAASPAGPLPPPTSAQPTappPPPGPPPPSLPLGGS 2855
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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