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Conserved domains on  [gi|1958642725|ref|XP_038957724|]
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proprotein convertase subtilisin/kexin type 6 isoform X1 [Rattus norvegicus]

Protein Classification

S8 family peptidase( domain architecture ID 13872809)

S8 family peptidase is a subtilisin-like serine protease containing an Asp/His/Ser catalytic triad that is not homologous to trypsin; similar to Homo sapiens furin, a ubiquitous endoprotease within constitutive secretory pathways capable of cleavage at the RX(K/R)R consensus motif

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
141-435 4.33e-172

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


:

Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 502.09  E-value: 4.33e-172
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 141 FNDPIWSNMWYMH-CADKNSRCRSEMNVQAAWKRGYTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSPRY 219
Cdd:cd04059     1 PNDPLFPYQWYLKnTGQAGGTPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 220 DasNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRMLDGDVTDVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGP 299
Cdd:cd04059    81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 300 GRLAKQAFEYGIKKGRQGLGSIFVWASGNGGREGDHCSCDGYTNSIYTISVSSTTENGHKPWYLEECASTLATTYSSGA- 378
Cdd:cd04059   159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSg 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958642725 379 FYERKIVTTDLR--QRCTDGHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSR 435
Cdd:cd04059   239 NPEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
520-610 6.94e-41

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


:

Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 144.72  E-value: 6.94e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 520 LEHVVVRISISHPRRGDLQIHLISPSGTKSQLLAKRLLDFSNEGFTNWEFMTVHCWGEKAEGEWTLEVQDipsqvRNPEK 599
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTD-----TAPGD 75
                          90
                  ....*....|.
gi 1958642725 600 QGKLKEWSLIL 610
Cdd:pfam01483  76 TGTLNSWQLTL 86
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
56-132 7.28e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


:

Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.11  E-value: 7.28e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958642725  56 HWAVQVLGGPGAADRVAAAHGYLNLGQIGNLDDYYHFYHSKTFKRSTLSSRGPHTFLRMDPQVKWLQQQEVKRRVKR 132
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
GF_recep_IV super family cl37890
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
675-785 6.76e-20

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


The actual alignment was detected with superfamily member pfam14843:

Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 86.66  E-value: 6.76e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 675 VCHPECGDKGCDGPSADQCLNCVHFSLGNSktnrkCVSECPLGYFGD---TAARRCRRCHKGCE------TCTGRSPTQC 745
Cdd:pfam14843   1 VCDPLCSSEGCWGPGPDQCLSCRNFSRGGT-----CVESCNILQGEPreyVVNSTCVPCHPECLpqngtaTCSGPGADNC 75
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1958642725 746 LSCRrgfyHHQETNTCVTLCPAGL---------YADEsQRLCLRCHPSC 785
Cdd:pfam14843  76 TKCA----HFRDGPHCVSSCPSGVlgendliwkYADA-NGVCQPCHPNC 119
FU smart00261
Furin-like repeats;
825-867 5.82e-09

Furin-like repeats;


:

Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 52.51  E-value: 5.82e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1958642725  825 RCGECHHTCRTCVGPSREECIHCAKSFHFQDWKCVPACGEGFY 867
Cdd:smart00261   3 ECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKCVSECPPGTY 45
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
781-826 3.05e-08

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


:

Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 50.60  E-value: 3.05e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1958642725 781 CHPSCQKCVDE-PEKCTVCKEGFSLARGSCIPDCEPGTYFDSELIRC 826
Cdd:cd00064     2 CHPSCATCTGPgPDQCTSCRHGFYLDGGTCVSECPEGTYADTEGGVC 48
PLAC pfam08686
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ...
923-946 4.07e-04

PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.


:

Pssm-ID: 462560  Cd Length: 31  Bit Score: 38.29  E-value: 4.07e-04
                          10        20
                  ....*....|....*....|....
gi 1958642725 923 FCEMVKSNRLCERKLFIQFCCRTC 946
Cdd:pfam08686   7 NCSLVVQARLCSHKYYRQFCCRSC 30
FU smart00261
Furin-like repeats;
877-911 5.72e-03

Furin-like repeats;


:

Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 35.56  E-value: 5.72e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1958642725  877 KVCRRCDENCLSCEGS-SRNCSRCKAGFTQLGTSCI 911
Cdd:smart00261   2 GECKPCHPECATCTGPgPDDCTSCKHGFFLDGGKCV 37
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
141-435 4.33e-172

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 502.09  E-value: 4.33e-172
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 141 FNDPIWSNMWYMH-CADKNSRCRSEMNVQAAWKRGYTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSPRY 219
Cdd:cd04059     1 PNDPLFPYQWYLKnTGQAGGTPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 220 DasNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRMLDGDVTDVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGP 299
Cdd:cd04059    81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 300 GRLAKQAFEYGIKKGRQGLGSIFVWASGNGGREGDHCSCDGYTNSIYTISVSSTTENGHKPWYLEECASTLATTYSSGA- 378
Cdd:cd04059   159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSg 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958642725 379 FYERKIVTTDLR--QRCTDGHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSR 435
Cdd:cd04059   239 NPEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
177-460 4.35e-67

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 226.19  E-value: 4.35e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 177 GKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDY----DPSPRYDASNENKHGTRCAGEVAASANNSYCIVGIAYNA 252
Cdd:pfam00082   1 GKGVVVAVLDTGIDPNHPDLSGNLDNDPSDDPEASVDfnneWDDPRDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 253 KIGGIRML-DGDVTDVVEAKSLG-IRPNYIDIYSASWGPDddgKTVDGPGRLAKQAFEYGikkGRQGLGSIFVWASGNGG 330
Cdd:pfam00082  81 KILGVRVFgDGGGTDAITAQAISwAIPQGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 331 REGDHCSCDGY-TNSIYTISVSSTTEnghkpwyleeCASTLATTYSSG------------AFY-----------ERKIVT 386
Cdd:pfam00082 155 PGGNNGSSVGYpAQYKNVIAVGAVDE----------ASEGNLASFSSYgptldgrlkpdiVAPggnitggnissTLLTTT 224
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958642725 387 TDLRQRCTDGHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRPAHLKASDwkvngaghkvsHLYGFG 460
Cdd:pfam00082 225 SDPPNQGYDSMSGTSMATPHVAGAAALLKQAYPNLTPETLKALLVNTATDLGDAGLD-----------RLFGYG 287
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
174-467 3.76e-41

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 157.95  E-value: 3.76e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 174 GYTGKNVVVTILDDGIERNHPDLAPNYDsyASYDVNGNDYDPSprydasNENKHGTRCAGEVAASANNSYCIVGIAYNAK 253
Cdd:COG1404   105 GLTGAGVTVAVIDTGVDADHPDLAGRVV--GGYDFVDGDGDPS------DDNGHGTHVAGIIAANGNNGGGVAGVAPGAK 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 254 IGGIRMLD----GDVTDVVE----AKSLGIrpnyiDIYSASWGPDDDGKTvdgpgRLAKQAFEYGIKKGrqglgSIFVWA 325
Cdd:COG1404   177 LLPVRVLDdngsGTTSDIAAaidwAADNGA-----DVINLSLGGPADGYS-----DALAAAVDYAVDKG-----VLVVAA 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 326 SGNggrEGDHCSCDGYTNSIY-TISVSSTTENGHKPWYleecaStlattySSGAFYE-----RKIVTTDLRQRcTDGHTG 399
Cdd:COG1404   242 AGN---SGSDDATVSYPAAYPnVIAVGAVDANGQLASF-----S------NYGPKVDvaapgVDILSTYPGGG-YATLSG 306
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958642725 400 TSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRPAHLKASDwkvngaghkvshlYGFGLVDAEAL 467
Cdd:COG1404   307 TSMAAPHVAGAAALLLSANPDLTPAQVRAILLNTATPLGAPGPY-------------YGYGLLADGAA 361
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
520-610 6.94e-41

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 144.72  E-value: 6.94e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 520 LEHVVVRISISHPRRGDLQIHLISPSGTKSQLLAKRLLDFSNEGFTNWEFMTVHCWGEKAEGEWTLEVQDipsqvRNPEK 599
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTD-----TAPGD 75
                          90
                  ....*....|.
gi 1958642725 600 QGKLKEWSLIL 610
Cdd:pfam01483  76 TGTLNSWQLTL 86
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
56-132 7.28e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.11  E-value: 7.28e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958642725  56 HWAVQVLGGPGAADRVAAAHGYLNLGQIGNLDDYYHFYHSKTFKRSTLSSRGPHTFLRMDPQVKWLQQQEVKRRVKR 132
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
675-785 6.76e-20

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 86.66  E-value: 6.76e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 675 VCHPECGDKGCDGPSADQCLNCVHFSLGNSktnrkCVSECPLGYFGD---TAARRCRRCHKGCE------TCTGRSPTQC 745
Cdd:pfam14843   1 VCDPLCSSEGCWGPGPDQCLSCRNFSRGGT-----CVESCNILQGEPreyVVNSTCVPCHPECLpqngtaTCSGPGADNC 75
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1958642725 746 LSCRrgfyHHQETNTCVTLCPAGL---------YADEsQRLCLRCHPSC 785
Cdd:pfam14843  76 TKCA----HFRDGPHCVSSCPSGVlgendliwkYADA-NGVCQPCHPNC 119
FU smart00261
Furin-like repeats;
724-770 3.31e-10

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 55.98  E-value: 3.31e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1958642725  724 ARRCRRCHKGCETCTGRSPTQCLSCRRGFYHHQetNTCVTLCPAGLY 770
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLDG--GKCVSECPPGTY 45
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
730-779 1.38e-09

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 54.45  E-value: 1.38e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1958642725 730 CHKGCETCTGRSPTQCLSCRRGFYHHQetNTCVTLCPAGLYADESQRLCL 779
Cdd:cd00064     2 CHPSCATCTGPGPDQCTSCRHGFYLDG--GTCVSECPEGTYADTEGGVCL 49
FU smart00261
Furin-like repeats;
825-867 5.82e-09

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 52.51  E-value: 5.82e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1958642725  825 RCGECHHTCRTCVGPSREECIHCAKSFHFQDWKCVPACGEGFY 867
Cdd:smart00261   3 ECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKCVSECPPGTY 45
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
781-826 3.05e-08

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 50.60  E-value: 3.05e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1958642725 781 CHPSCQKCVDE-PEKCTVCKEGFSLARGSCIPDCEPGTYFDSELIRC 826
Cdd:cd00064     2 CHPSCATCTGPgPDQCTSCRHGFYLDGGTCVSECPEGTYADTEGGVC 48
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
828-870 8.20e-08

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 49.44  E-value: 8.20e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1958642725 828 ECHHTCRTCVGPSREECIHCAKSFHFQDWKCVPACGEGFYPEE 870
Cdd:cd00064     1 PCHPSCATCTGPGPDQCTSCRHGFYLDGGTCVSECPEGTYADT 43
PTZ00262 PTZ00262
subtilisin-like protease; Provisional
182-430 8.68e-08

subtilisin-like protease; Provisional


Pssm-ID: 240338 [Multi-domain]  Cd Length: 639  Bit Score: 56.13  E-value: 8.68e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 182 VTILDDGIERNHPDLAPNY----------------------DSYASYDVNGNDydpspryDASNENKHGTRCAGEVAASA 239
Cdd:PTZ00262  320 ICVIDSGIDYNHPDLHDNIdvnvkelhgrkgidddnngnvdDEYGANFVNNDG-------GPMDDNYHGTHVSGIISAIG 392
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 240 NNSYCIVGIAYNAKIGGIRMLD----GDVTDVVEAKSLGIRPNyIDIYSASWGPDDDGKTVDgpgrlakQAFEYgikkgR 315
Cdd:PTZ00262  393 NNNIGIVGVDKRSKLIICKALDshklGRLGDMFKCFDYCISRE-AHMINGSFSFDEYSGIFN-------ESVKY-----L 459
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 316 QGLGSIFVWASGN----GGREGDHCSCDGYTNSIY----------TISVSSTTE--NGHKPWYLEECASTLattYSSGAF 379
Cdd:PTZ00262  460 EEKGILFVVSASNcshtKESKPDIPKCDLDVNKVYppilskklrnVITVSNLIKdkNNQYSLSPNSFYSAK---YCQLAA 536
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1958642725 380 YERKIVTTDLRQRCTDGhTGTSVSAPMVAGIIALALEANNQLTWRDVQHLL 430
Cdd:PTZ00262  537 PGTNIYSTFPKNSYRKL-NGTSMAAPHVAAIASLILSINPSLSYEEVIRIL 586
FU smart00261
Furin-like repeats;
778-818 1.59e-07

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 48.66  E-value: 1.59e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1958642725  778 CLRCHPSCQKCVD-EPEKCTVCKEGFSLARGSCIPDCEPGTY 818
Cdd:smart00261   4 CKPCHPECATCTGpGPDDCTSCKHGFFLDGGKCVSECPPGTY 45
Furin-like_2 pfam15913
Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a ...
807-866 7.97e-05

Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a variety of proteins from eukaryotes that are involved in the mechanism of signal transduction by receptor tyrosine kinases, which involves receptor aggregation.


Pssm-ID: 464939 [Multi-domain]  Cd Length: 102  Bit Score: 42.42  E-value: 7.97e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958642725 807 GSCIPDCEPGtYF---DSELIRCGECH-HTCRTCVgpSREECIHCAKSFHFQDWKCVPACGEGF 866
Cdd:pfam15913  33 GVCLHSCPPG-YFgirGQEVNRCTKCKaENCESCF--SKDFCTKCKEGFYLHKGKCLDTCPEGT 93
PLAC pfam08686
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ...
923-946 4.07e-04

PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.


Pssm-ID: 462560  Cd Length: 31  Bit Score: 38.29  E-value: 4.07e-04
                          10        20
                  ....*....|....*....|....
gi 1958642725 923 FCEMVKSNRLCERKLFIQFCCRTC 946
Cdd:pfam08686   7 NCSLVVQARLCSHKYYRQFCCRSC 30
FU smart00261
Furin-like repeats;
877-911 5.72e-03

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 35.56  E-value: 5.72e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1958642725  877 KVCRRCDENCLSCEGS-SRNCSRCKAGFTQLGTSCI 911
Cdd:smart00261   2 GECKPCHPECATCTGPgPDDCTSCKHGFFLDGGKCV 37
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
141-435 4.33e-172

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 502.09  E-value: 4.33e-172
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 141 FNDPIWSNMWYMH-CADKNSRCRSEMNVQAAWKRGYTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSPRY 219
Cdd:cd04059     1 PNDPLFPYQWYLKnTGQAGGTPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 220 DasNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRMLDGDVTDVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGP 299
Cdd:cd04059    81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 300 GRLAKQAFEYGIKKGRQGLGSIFVWASGNGGREGDHCSCDGYTNSIYTISVSSTTENGHKPWYLEECASTLATTYSSGA- 378
Cdd:cd04059   159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSg 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958642725 379 FYERKIVTTDLR--QRCTDGHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSR 435
Cdd:cd04059   239 NPEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
177-460 4.35e-67

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 226.19  E-value: 4.35e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 177 GKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDY----DPSPRYDASNENKHGTRCAGEVAASANNSYCIVGIAYNA 252
Cdd:pfam00082   1 GKGVVVAVLDTGIDPNHPDLSGNLDNDPSDDPEASVDfnneWDDPRDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 253 KIGGIRML-DGDVTDVVEAKSLG-IRPNYIDIYSASWGPDddgKTVDGPGRLAKQAFEYGikkGRQGLGSIFVWASGNGG 330
Cdd:pfam00082  81 KILGVRVFgDGGGTDAITAQAISwAIPQGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 331 REGDHCSCDGY-TNSIYTISVSSTTEnghkpwyleeCASTLATTYSSG------------AFY-----------ERKIVT 386
Cdd:pfam00082 155 PGGNNGSSVGYpAQYKNVIAVGAVDE----------ASEGNLASFSSYgptldgrlkpdiVAPggnitggnissTLLTTT 224
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958642725 387 TDLRQRCTDGHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRPAHLKASDwkvngaghkvsHLYGFG 460
Cdd:pfam00082 225 SDPPNQGYDSMSGTSMATPHVAGAAALLKQAYPNLTPETLKALLVNTATDLGDAGLD-----------RLFGYG 287
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
174-467 3.76e-41

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 157.95  E-value: 3.76e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 174 GYTGKNVVVTILDDGIERNHPDLAPNYDsyASYDVNGNDYDPSprydasNENKHGTRCAGEVAASANNSYCIVGIAYNAK 253
Cdd:COG1404   105 GLTGAGVTVAVIDTGVDADHPDLAGRVV--GGYDFVDGDGDPS------DDNGHGTHVAGIIAANGNNGGGVAGVAPGAK 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 254 IGGIRMLD----GDVTDVVE----AKSLGIrpnyiDIYSASWGPDDDGKTvdgpgRLAKQAFEYGIKKGrqglgSIFVWA 325
Cdd:COG1404   177 LLPVRVLDdngsGTTSDIAAaidwAADNGA-----DVINLSLGGPADGYS-----DALAAAVDYAVDKG-----VLVVAA 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 326 SGNggrEGDHCSCDGYTNSIY-TISVSSTTENGHKPWYleecaStlattySSGAFYE-----RKIVTTDLRQRcTDGHTG 399
Cdd:COG1404   242 AGN---SGSDDATVSYPAAYPnVIAVGAVDANGQLASF-----S------NYGPKVDvaapgVDILSTYPGGG-YATLSG 306
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958642725 400 TSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRPAHLKASDwkvngaghkvshlYGFGLVDAEAL 467
Cdd:COG1404   307 TSMAAPHVAGAAALLLSANPDLTPAQVRAILLNTATPLGAPGPY-------------YGYGLLADGAA 361
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
520-610 6.94e-41

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 144.72  E-value: 6.94e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 520 LEHVVVRISISHPRRGDLQIHLISPSGTKSQLLAKRLLDFSNEGFTNWEFMTVHCWGEKAEGEWTLEVQDipsqvRNPEK 599
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTD-----TAPGD 75
                          90
                  ....*....|.
gi 1958642725 600 QGKLKEWSLIL 610
Cdd:pfam01483  76 TGTLNSWQLTL 86
Peptidases_S8_15 cd07498
Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the ...
180-433 1.33e-38

Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173822 [Multi-domain]  Cd Length: 242  Bit Score: 144.02  E-value: 1.33e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 180 VVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSprydasNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRM 259
Cdd:cd07498     1 VVVAIIDTGVDLNHPDLSGKPKLVPGWNFVSNNDPTS------DIDGHGTACAGVAAAVGNNGLGVAGVAPGAKLMPVRI 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 260 LDGDVTDVVEAKSLGIR---PNYIDIYSASWGpdddGKTVDGPGRLakqAFEYGIKKGRQGLGSIFVWASGNGGREGDhc 336
Cdd:cd07498    75 ADSLGYAYWSDIAQAITwaaDNGADVISNSWG----GSDSTESISS---AIDNAATYGRNGKGGVVLFAAGNSGRSVS-- 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 337 scDGYTNSIYTISVSSTTENGHK-PW-----YLEECA--STLATTYSSGafyerkIVTTDLRQRCTDGHTGTSVSAPMVA 408
Cdd:cd07498   146 --SGYAANPSVIAVAATDSNDARaSYsnygnYVDLVApgVGIWTTGTGR------GSAGDYPGGGYGSFSGTSFASPVAA 217
                         250       260
                  ....*....|....*....|....*
gi 1958642725 409 GIIALALEANNQLTWRDVQHLLVKT 433
Cdd:cd07498   218 GVAALILSANPNLTPAEVEDILTST 242
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
56-132 7.28e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.11  E-value: 7.28e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958642725  56 HWAVQVLGGPGAADRVAAAHGYLNLGQIGNLDDYYHFYHSKTFKRSTLSSRGPHTFLRMDPQVKWLQQQEVKRRVKR 132
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
Peptidases_S8_S53 cd00306
Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and ...
180-433 2.35e-35

Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173787 [Multi-domain]  Cd Length: 241  Bit Score: 134.63  E-value: 2.35e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 180 VVVTILDDGIERNHPDLapnyDSYASYDVNGNDYDPSPRY--DASNENKHGTRCAGEVAASANNSYCiVGIAYNAKIGGI 257
Cdd:cd00306     1 VTVAVIDTGVDPDHPDL----DGLFGGGDGGNDDDDNENGptDPDDGNGHGTHVAGIIAASANNGGG-VGVAPGAKLIPV 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 258 RMLDGDVTDVVEAKSLGIR----PNYIDIYSASWGPDDDGktvdgPGRLAKQAFEYGIKKgrqgLGSIFVWASGNGGREG 333
Cdd:cd00306    76 KVLDGDGSGSSSDIAAAIDyaaaDQGADVINLSLGGPGSP-----PSSALSEAIDYALAK----LGVLVVAAAGNDGPDG 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 334 DHCScDGYTNSIYTISVSSTTENGHKPWYleecASTLATTYSSGAFYERKIVTTDLRQRCTDGHTGTSVSAPMVAGIIAL 413
Cdd:cd00306   147 GTNI-GYPAASPNVIAVGAVDRDGTPASP----SSNGGAGVDIAAPGGDILSSPTTGGGGYATLSGTSMAAPIVAGVAAL 221
                         250       260
                  ....*....|....*....|
gi 1958642725 414 ALEANNQLTWRDVQHLLVKT 433
Cdd:cd00306   222 LLSANPDLTPAQVKAALLST 241
Peptidases_S8_Subtilisin_like cd07473
Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the ...
178-435 1.08e-33

Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173799 [Multi-domain]  Cd Length: 259  Bit Score: 130.39  E-value: 1.08e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 178 KNVVVTILDDGIERNHPDLAPN-------------------Y-DSYASYDVNGNDYDPSPrydasnENKHGTRCAGEVAA 237
Cdd:cd07473     2 GDVVVAVIDTGVDYNHPDLKDNmwvnpgeipgngidddgngYvDDIYGWNFVNNDNDPMD------DNGHGTHVAGIIGA 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 238 SANNSYCIVGIAYNAKIGGIRMLD----GDVTDVVEAkslgIrpNY-----IDIYSASWGPdddgktvDGPGRLAKQAFE 308
Cdd:cd07473    76 VGNNGIGIAGVAWNVKIMPLKFLGadgsGTTSDAIKA----I--DYavdmgAKIINNSWGG-------GGPSQALRDAIA 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 309 YGIKKgrqglGSIFVWASGNGGREGDH-----CScdgYTNSiYTISVSSTTENGHKPWYLEECAST--LA-------TTY 374
Cdd:cd07473   143 RAIDA-----GILFVAAAGNDGTNNDKtptypAS---YDLD-NIISVAATDSNDALASFSNYGKKTvdLAapgvdilSTS 213
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958642725 375 SSGAfYERKivttdlrqrctdghTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSR 435
Cdd:cd07473   214 PGGG-YGYM--------------SGTSMATPHVAGAAALLLSLNPNLTAAQIKDAILSSAD 259
Peptidases_S8_Thermitase_like cd07484
Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, ...
142-436 1.85e-28

Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173810 [Multi-domain]  Cd Length: 260  Bit Score: 115.44  E-value: 1.85e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 142 NDPIWSNMWYMHcadknsrcrsEMNVQAAWKRGyTGKNVVVTILDDGIERNHPDLApNYDSYASYDVNGNDYDPSpryda 221
Cdd:cd07484     3 NDPYYSYQWNLD----------QIGAPKAWDIT-GGSGVTVAVVDTGVDPTHPDLL-KVKFVLGYDFVDNDSDAM----- 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 222 sNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRMLD----GDVTDVVEakslGIRpnyidiysasWGPDDDGKTV- 296
Cdd:cd07484    66 -DDNGHGTHVAGIIAAATNNGTGVAGVAPKAKIMPVKVLDangsGSLADIAN----GIR----------YAADKGAKVIn 130
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 297 -----DGPGRLAKQAFEYGIKKgrqglGSIFVWASGNGGREgdhcSCDgYTNSI-YTISVSSTTENGHKPWYleecaSTL 370
Cdd:cd07484   131 lslggGLGSTALQEAINYAWNK-----GVVVVAAAGNEGVS----SVS-YPAAYpGAIAVAATDQDDKRASF-----SNY 195
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958642725 371 ATTYSSGAFYErKIVTTDLRQRcTDGHTGTSVSAPMVAGIIALaLEANNQLTWRDVQHLLVKTSRP 436
Cdd:cd07484   196 GKWVDVSAPGG-GILSTTPDGD-YAYMSGTSMATPHVAGVAAL-LYSQGPLSASEVRDALKKTADD 258
Peptidases_S8_Fervidolysin_like cd07485
Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans ...
169-417 1.23e-26

Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173811 [Multi-domain]  Cd Length: 273  Bit Score: 110.65  E-value: 1.23e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 169 AAWKRGYTGKNVVVTILDDGIERNHPDLAPNYDSYA-SYDVNGNDYDPSPRYDA---SNENKHGTRCAGEVAASANNSYC 244
Cdd:cd07485     1 AAWEFGTGGPGIIVAVVDTGVDGTHPDLQGNGDGDGyDPAVNGYNFVPNVGDIDndvSVGGGHGTHVAGTIAAVNNNGGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 245 IVGIAYN------AKIGGIRMLDGD--VTDVVEAKSLG-IRPNYIDIYSASWGpdddGKTVDGPGRLAKQAFEYGIKKGR 315
Cdd:cd07485    81 VGGIAGAggvapgVKIMSIQIFAGRyyVGDDAVAAAIVyAADNGAVILQNSWG----GTGGGIYSPLLKDAFDYFIENAG 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 316 QGL--GSIFVWASGNGGREGDH--CSCDGytnsiyTISVSSTTENGHKPWYleecaSTLATTYSSGAFYERKIVTTDLRQ 391
Cdd:cd07485   157 GSPldGGIVVFSAGNSYTDEHRfpAAYPG------VIAVAALDTNDNKASF-----SNYGRWVDIAAPGVGTILSTVPKL 225
                         250       260       270
                  ....*....|....*....|....*....|.
gi 1958642725 392 RCTDGHT-----GTSVSAPMVAGIIALALEA 417
Cdd:cd07485   226 DGDGGGNyeylsGTSMAAPHVSGVAALVLSK 256
Peptidases_S8_Subtilisin_subset cd07477
Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different ...
179-433 9.98e-25

Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173803 [Multi-domain]  Cd Length: 229  Bit Score: 103.77  E-value: 9.98e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 179 NVVVTILDDGIERNHPDLAPNYdsyasydVNGNDYDPSPRYDASNENKHGTRCAGEVAAsANNSYCIVGIAYNAKIGGIR 258
Cdd:cd07477     1 GVKVAVIDTGIDSSHPDLKLNI-------VGGANFTGDDNNDYQDGNGHGTHVAGIIAA-LDNGVGVVGVAPEADLYAVK 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 259 MLD----GDVTDVVEAKSLGIRpNYIDIYSASWGPDDDGKTVdgpgrlaKQAFEYGIKKGrqglgsIF-VWASGNggreg 333
Cdd:cd07477    73 VLNddgsGTYSDIIAGIEWAIE-NGMDIINMSLGGPSDSPAL-------REAIKKAYAAG------ILvVAAAGN----- 133
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 334 dhcscDGYTNSIYT--------ISVSSTTENGhkpwyleecasTLATTYSSGAFYE-----RKIVTTDLRQRCTDGhTGT 400
Cdd:cd07477   134 -----SGNGDSSYDypakypsvIAVGAVDSNN-----------NRASFSSTGPEVElaapgVDILSTYPNNDYAYL-SGT 196
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1958642725 401 SVSAPMVAGIIALALEANNQLTWRDVQHLLVKT 433
Cdd:cd07477   197 SMATPHVAGVAALVWSKRPELTNAQVRQALNKT 229
Peptidases_S8_13 cd07496
Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the ...
179-430 1.41e-23

Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173820 [Multi-domain]  Cd Length: 285  Bit Score: 101.99  E-value: 1.41e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 179 NVVVTILDDGIERNHPDLA----PNYD----SYASYDVNGNDYDPS----------------PRYDASNENKHGTRCAGE 234
Cdd:cd07496     1 GVVVAVLDTGVLFHHPDLAgvllPGYDfisdPAIANDGDGRDSDPTdpgdwvtgddvppggfCGSGVSPSSWHGTHVAGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 235 VAASANNSYCIVGIAYNAKIGGIRML---DGDVTDVVEakslGIRpnyidiYSAswgpdddGKTVDG---PGRLAK---- 304
Cdd:cd07496    81 IAAVTNNGVGVAGVAWGARILPVRVLgkcGGTLSDIVD----GMR------WAA-------GLPVPGvpvNPNPAKvinl 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 305 ---------QAFEYGIKKGRQgLGSIFVWASGNGGREGDH---CSCDGytnsiyTISVSSTTENGHKPWYLE-------- 364
Cdd:cd07496   144 slggdgacsATMQNAINDVRA-RGVLVVVAAGNEGSSASVdapANCRG------VIAVGATDLRGQRASYSNygpavdvs 216
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958642725 365 ----ECASTL---------ATTYSSGAFYERkivttdlrqrctdGHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLL 430
Cdd:cd07496   217 apggDCASDVngdgypdsnTGTTSPGGSTYG-------------FLQGTSMAAPHVAGVAALMKSVNPSLTPAQIESLL 282
Peptidases_S8_Autotransporter_serine_protease_like cd04848
Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine ...
176-435 1.54e-23

Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.


Pssm-ID: 173794 [Multi-domain]  Cd Length: 267  Bit Score: 101.25  E-value: 1.54e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 176 TGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSPRydasNENKHGTRCAGEVAASANNSYcIVGIAYNAKIG 255
Cdd:cd04848     1 TGAGVKVGVIDSGIDLSHPEFAGRVSEASYYVAVNDAGYASNG----DGDSHGTHVAGVIAAARDGGG-MHGVAPDATLY 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 256 GIRMLDGDVTDVVEAkslGIRPNY-------IDIYSASWGPDDDGKTVDGPGRL---AKQAFEYGIKKGRQGLGSIFVWA 325
Cdd:cd04848    76 SARASASAGSTFSDA---DIAAAYdflaasgVRIINNSWGGNPAIDTVSTTYKGsaaTQGNTLLAALARAANAGGLFVFA 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 326 SGNggregdhcscDGYTNSIYT---------------ISVSSTTENGHKP--WYLEECAST----LAttyssgAFYERKI 384
Cdd:cd04848   153 AGN----------DGQANPSLAaaalpylepeleggwIAVVAVDPNGTIAsySYSNRCGVAanwcLA------APGENIY 216
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1958642725 385 VTTDLRQRCTDGHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSR 435
Cdd:cd04848   217 STDPDGGNGYGRVSGTSFAAPHVSGAAALLAQKFPWLTADQVRQTLLTTAT 267
Peptidases_S8_subtilisin_Vpr-like cd07474
Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic ...
177-438 1.43e-21

Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173800 [Multi-domain]  Cd Length: 295  Bit Score: 96.25  E-value: 1.43e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 177 GKNVVVTILDDGIERNHPDLA----PNYDSYASYDVNGNDYDPSPR---------YDASNENKHGTRCAGEVAASANNSY 243
Cdd:cd07474     1 GKGVKVAVIDTGIDYTHPDLGgpgfPNDKVKGGYDFVDDDYDPMDTrpypsplgdASAGDATGHGTHVAGIIAGNGVNVG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 244 CIVGIAYNAKIGGIRMLDGD---VTDVVEAK--------------SLGIRPNYIDiysaswgpDDDGKTVDgpgRLAKqa 306
Cdd:cd07474    81 TIKGVAPKADLYAYKVLGPGgsgTTDVIIAAieqavddgmdvinlSLGSSVNGPD--------DPDAIAIN---NAVK-- 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 307 feygikkgrqgLGSIFVWASGNGGreGDHCSCDGYTNSIYTISVSSTTenGHKPWYleecASTLATTYSSGAFYERKIVT 386
Cdd:cd07474   148 -----------AGVVVVAAAGNSG--PAPYTIGSPATAPSAITVGAST--VADVAE----ADTVGPSSSRGPPTSDSAIK 208
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958642725 387 TDL----------RQRCTDG---HTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRPAH 438
Cdd:cd07474   209 PDIvapgvdimstAPGSGTGyarMSGTSMAAPHVAGAAALLKQAHPDWSPAQIKAALMNTAKPLY 273
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
675-785 6.76e-20

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 86.66  E-value: 6.76e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 675 VCHPECGDKGCDGPSADQCLNCVHFSLGNSktnrkCVSECPLGYFGD---TAARRCRRCHKGCE------TCTGRSPTQC 745
Cdd:pfam14843   1 VCDPLCSSEGCWGPGPDQCLSCRNFSRGGT-----CVESCNILQGEPreyVVNSTCVPCHPECLpqngtaTCSGPGADNC 75
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1958642725 746 LSCRrgfyHHQETNTCVTLCPAGL---------YADEsQRLCLRCHPSC 785
Cdd:pfam14843  76 TKCA----HFRDGPHCVSSCPSGVlgendliwkYADA-NGVCQPCHPNC 119
COG4935 COG4935
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ...
167-612 1.15e-19

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443962 [Multi-domain]  Cd Length: 641  Bit Score: 94.50  E-value: 1.15e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 167 VQAAWKRGYTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSPRYDASNENKHGTRCAGEVAASANNSYCIV 246
Cdd:COG4935   198 VAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGVGGLGAAATAAAADGGGGGGAGAAGAGGSAGAAA 277
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 247 GIAYNAKIGGIRMLDGDVTDVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGPGRLAKQAFEYGIKKGRQGLGSIFVWAS 326
Cdd:COG4935   278 GGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGSAAAAGAAAAAAAAAAGAAAGVSGAASVVAGASG 357
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 327 GNGGREGDHCSCDGYTNSIYTISVSSTTENGHKPWYLEECASTLATTYSSGAFYERKIVTTDLRQRCTDGHTGTSVSAPM 406
Cdd:COG4935   358 GGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASAAGAVGAGTAAGASATAAVSTGAASGSSTTSSTG 437
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 407 VAGIIALALEANNQLTWRDVQHLLV--------------KTSRPAHLKASDWKVNGAGHKVSHLYGFGLVDAEALVLEAR 472
Cdd:COG4935   438 TTATATGLGGGADAGSTSTGTGSAAgaaggtttatsglaSSTTAAAAAAAAGLATTAAVAAGAAGAAAAAATAASVGGAT 517
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 473 KWTAVPSQHMCVATADkrPRSIP---VVQVLRTTALTNACAdhsdqrvvyLEHVVVRISISHPRRGDLQIHLISPSGTKS 549
Cdd:COG4935   518 GAAGTTNSTATFSNTT--DVAIPdngPAGVTSTITVSGGGA---------VEDVTVTVDITHTYRGDLVITLISPDGTTV 586
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958642725 550 QLLAKRLLDFSNEgftNWEFMTVHCWGEKAEGEWTLEVQDipsqvRNPEKQGKLKEWSLILYG 612
Cdd:COG4935   587 VLKNRSGGSADNI---NATFDVANFSGESANGTWTLRVVD-----TAGGDTGTLNSWSLTFTG 641
Peptidases_S8_Kp43_protease cd04842
Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 ...
172-441 4.17e-19

Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases


Pssm-ID: 173791 [Multi-domain]  Cd Length: 293  Bit Score: 88.93  E-value: 4.17e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 172 KRGYTGKNVVVTILDDGIERNHPDLapnydsyasYDVNGNDYDPSPR----YDASNENK-----HGTRCAGEVAASANNS 242
Cdd:cd04842     1 GLGLTGKGQIVGVADTGLDTNHCFF---------YDPNFNKTNLFHRkivrYDSLSDTKddvdgHGTHVAGIIAGKGNDS 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 243 YCIV---GIAYNAKIGGIRMLDG--------DVTDVVE-AKSLGIRpnyidIYSASWGPDDDG------KTVDgpgrlaK 304
Cdd:cd04842    72 SSISlykGVAPKAKLYFQDIGDTsgnlssppDLNKLFSpMYDAGAR-----ISSNSWGSPVNNgytllaRAYD------Q 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 305 QAFEYgikkgrQGLgsIFVWASGNGGREGdhcscdgyTNSIYT-------ISVSSTT----ENGHKPWYLEECASTLATT 373
Cdd:cd04842   141 FAYNN------PDI--LFVFSAGNDGNDG--------SNTIGSpataknvLTVGASNnpsvSNGEGGLGQSDNSDTVASF 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 374 YSSGAFYERKI----------VTTDLRQRCTDGHT---------GTSVSAPMVAGIIALALEAnnqltWRDVQHLLVKTS 434
Cdd:cd04842   205 SSRGPTYDGRIkpdlvapgtgILSARSGGGGIGDTsdsaytsksGTSMATPLVAGAAALLRQY-----FVDGYYPTKFNP 279

                  ....*..
gi 1958642725 435 RPAHLKA 441
Cdd:cd04842   280 SAALLKA 286
Peptidases_S8_1 cd07487
Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the ...
177-433 7.38e-19

Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173812 [Multi-domain]  Cd Length: 264  Bit Score: 87.64  E-value: 7.38e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 177 GKNVVVTILDDGIERNHPDLAPNYDSYAsYDVNGNDYDPSPrYDasnENKHGTRCAGEVA---ASANNSYCivGIAYNAK 253
Cdd:cd07487     1 GKGITVAVLDTGIDAPHPDFDGRIIRFA-DFVNTVNGRTTP-YD---DNGHGTHVAGIIAgsgRASNGKYK--GVAPGAN 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 254 IGGIRMLD----GDVTDVVEA--------KSLGIRpnyidIYSASWGPDDDGKTVDGPGRLA-KQAFEYGIkkgrqglgs 320
Cdd:cd07487    74 LVGVKVLDdsgsGSESDIIAGidwvvennEKYNIR-----VVNLSLGAPPDPSYGEDPLCQAvERLWDAGI--------- 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 321 IFVWASGNGGREGDHCSCDGytNSIYTISVSSTTENGHKPWYLeecastlaTTYSSG---AFYERK--IVT--------- 386
Cdd:cd07487   140 VVVVAAGNSGPGPGTITSPG--NSPKVITVGAVDDNGPHDDGI--------SYFSSRgptGDGRIKpdVVApgenivscr 209
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1958642725 387 -TDLRQRCTDGH-----TGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKT 433
Cdd:cd07487   210 sPGGNPGAGVGSgyfemSGTSMATPHVSGAIALLLQANPILTPDEVKCILRDT 262
Peptidases_S8_5 cd07489
Peptidase S8 family domain, uncharacterized subfamily 5; gap in seq This family is a member of ...
173-464 2.98e-15

Peptidase S8 family domain, uncharacterized subfamily 5; gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173814 [Multi-domain]  Cd Length: 312  Bit Score: 77.64  E-value: 2.98e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 173 RGYTGKNVVVTILDDGIERNHPDLA----PNYDSYASYDVNGNDYDPS----PRYDASNENKHGTRCAGEVAASaNNSYC 244
Cdd:cd07489     8 EGITGKGVKVAVVDTGIDYTHPALGgcfgPGCKVAGGYDFVGDDYDGTnppvPDDDPMDCQGHGTHVAGIIAAN-PNAYG 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 245 IVGIAYNAKIGGIRMLD--GDVTDVVEAKSL------GirpnyIDIYSASWGpdDDGKTVDGPG-----RLAKQafeygi 311
Cdd:cd07489    87 FTGVAPEATLGAYRVFGcsGSTTEDTIIAAFlrayedG-----ADVITASLG--GPSGWSEDPWavvasRIVDA------ 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 312 kkgrqglGSIFVWASGNGGREGDHCSCDGyTNSIYTISVSSttenghkpwyleecastLATTYSS-GAFYE--------- 381
Cdd:cd07489   154 -------GVVVTIAAGNDGERGPFYASSP-ASGRGVIAVAS-----------------VDSYFSSwGPTNElylkpdvaa 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 382 --RKIVTTDLRQrcTDGH---TGTSVSAPMVAGIIALALEA-NNQLTWRDVQHLLVKTSRPahLKASDWKVNGAGHKVSH 455
Cdd:cd07489   209 pgGNILSTYPLA--GGGYavlSGTSMATPYVAGAAALLIQArHGKLSPAELRDLLASTAKP--LPWSDGTSALPDLAPVA 284

                  ....*....
gi 1958642725 456 LYGFGLVDA 464
Cdd:cd07489   285 QQGAGLVNA 293
Peptidases_S8_Lantibiotic_specific_protease cd07482
Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific ...
179-433 5.60e-15

Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases; Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173808 [Multi-domain]  Cd Length: 294  Bit Score: 76.64  E-value: 5.60e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 179 NVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPS-PRYDASNENK-----HGTRCAGEVAASANnsycIVGIAYNA 252
Cdd:cd07482     1 KVTVAVIDSGIDPDHPDLKNSISSYSKNLVPKGGYDGKeAGETGDINDIvdklgHGTAVAGQIAANGN----IKGVAPGI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 253 KIGGIRMLD------------------GDVTDVVEAkSLGirpNYIDIYSASWgpDDDGKTvdgpgRLAKQAFEYGIKKg 314
Cdd:cd07482    77 GIVSYRVFGscgsaesswiikaiidaaDDGVDVINL-SLG---GYLIIGGEYE--DDDVEY-----NAYKKAINYAKSK- 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 315 rqglGSIFVWASGNGGREG-------DHCSCDGY--TNSIY---------TISVSSTTENGhkpwYLEECAS------TL 370
Cdd:cd07482   145 ----GSIVVAAAGNDGLDVsnkqellDFLSSGDDfsVNGEVydvpaslpnVITVSATDNNG----NLSSFSNygnsriDL 216
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958642725 371 ATT---------YSSGAFYERKIVTTDLR-----QRCTDGHTGTSVSAPMVAGIIALALEANNQLTWRD-VQHLLVKT 433
Cdd:cd07482   217 AAPggdfllldqYGKEKWVNNGLMTKEQIlttapEGGYAYMYGTSLAAPKVSGALALIIDKNPLKKPPDeAIRILYNT 294
Peptidases_S8_Subtilisin_Novo-like cd07483
Peptidase S8 family domain in Subtilisin_Novo-like proteins; Subtilisins are a group of ...
178-434 3.25e-14

Peptidase S8 family domain in Subtilisin_Novo-like proteins; Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin.. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173809 [Multi-domain]  Cd Length: 291  Bit Score: 74.32  E-value: 3.25e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 178 KNVVVTILDDGIERNHPDLAP----NYDSYAS---------Y--DVNG----NDYDPSP-----RYDASNEN-------- 225
Cdd:cd07483     1 KTVIVAVLDSGVDIDHEDLKGklwiNKKEIPGngidddnngYidDVNGwnflGQYDPRRivgddPYDLTEKGygnndvng 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 226 -----KHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRM------LDGDVtdvveakSLGIR---PNYIDIYSASWgpdd 291
Cdd:cd07483    81 pisdaDHGTHVAGIIAAVRDNGIGIDGVADNVKIMPLRIvpngdeRDKDI-------ANAIRyavDNGAKVINMSF---- 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 292 dGKTVDGPGRLAKQAFEYGIKKgrqglGSIFVWASGNggregDHCSCDGYTNSIYTIS------VSSTTENGHKPWYLEE 365
Cdd:cd07483   150 -GKSFSPNKEWVDDAIKYAESK-----GVLIVHAAGN-----DGLDLDITPNFPNDYDknggepANNFITVGASSKKYEN 218
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958642725 366 casTLATTYSS-G-------AFYERKIVTTDLRQRCTDGhtGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTS 434
Cdd:cd07483   219 ---NLVANFSNyGkknvdvfAPGERIYSTTPDNEYETDS--GTSMAAPVVSGVAALIWSYYPNLTAKEVKQIILESG 290
Peptidases_S8_12 cd07480
Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the ...
175-450 3.86e-12

Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173806 [Multi-domain]  Cd Length: 297  Bit Score: 68.17  E-value: 3.86e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 175 YTGKNVVVTILDDGIERNHPDLApnydsyasyDVNGNDYDPSPRYDASNENKHGTRCAGEVAASANNSYCIvGIAYNAKI 254
Cdd:cd07480     5 FTGAGVRVAVLDTGIDLTHPAFA---------GRDITTKSFVGGEDVQDGHGHGTHCAGTIFGRDVPGPRY-GVARGAEI 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 255 GGIRML----DGDVTDVVEAKSLGIRpNYIDIYSASWGPDDDGKTVDG--PGRLAKQAFE--------------YGIKKG 314
Cdd:cd07480    75 ALIGKVlgdgGGGDGGILAGIQWAVA-NGADVISMSLGADFPGLVDQGwpPGLAFSRALEayrqrarlfdalmtLVAAQA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 315 RQGLGSIFVWASGN-GGREGdhcscdgytNSIYTISVSSttenghkpwyleeCASTLA----------TTYSSGAFYERK 383
Cdd:cd07480   154 ALARGTLIVAAAGNeSQRPA---------GIPPVGNPAA-------------CPSAMGvaavgalgrtGNFSAVANFSNG 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 384 IVT-----TDLRQRCTDGHT----GTSVSAPMVAGIIALALEANNQLTWRD----VQHLLVKTSRPAHLKASDWKVNGAG 450
Cdd:cd07480   212 EVDiaapgVDIVSAAPGGGYrsmsGTSMATPHVAGVAALWAEALPKAGGRAlaalLQARLTAARTTQFAPGLDLPDRGVG 291
Peptidases_S8_10 cd07494
Peptidase S8 family domain, uncharacterized subfamily 10; This family is a member of the ...
165-442 6.31e-11

Peptidase S8 family domain, uncharacterized subfamily 10; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173819 [Multi-domain]  Cd Length: 298  Bit Score: 64.42  E-value: 6.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 165 MNVQAAWKRGYTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDydpsPRYDasnENKHGTrcaGEvaaSANnsyc 244
Cdd:cd07494     8 LNATRVHQRGITGRGVRVAMVDTGFYAHPFFESRGYQVRVVLAPGATD----PACD---ENGHGT---GE---SAN---- 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 245 IVGIAYNAKIGGIRMLDGDVTDVVEA--KSLGIRPnyiDIYSASWGPDDDGKTVDGPGRL--AKQAFEYGIKKG-RQGLg 319
Cdd:cd07494    71 LFAIAPGAQFIGVKLGGPDLVNSVGAfkKAISLSP---DIISNSWGYDLRSPGTSWSRSLpnALKALAATLQDAvARGI- 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 320 sIFVWASGNGG------------------------REGDHCScdGYTNSIYTisvSSTTEN-----GHKPWyleecASTL 370
Cdd:cd07494   147 -VVVFSAGNGGwsfpaqhpeviaaggvfvdedgarRASSYAS--GFRSKIYP---GRQVPDvcglvGMLPH-----AAYL 215
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958642725 371 ATTYSSGAFYERKIVTTDLRQRCTDG---HTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRPAHLKAS 442
Cdd:cd07494   216 MLPVPPGSQLDRSCAAFPDGTPPNDGwgvFSGTSAAAPQVAGVCALMLQANPGLSPERARSLLNKTARDVTKGAS 290
Peptidases_S8_8 cd07492
Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the ...
180-435 1.38e-10

Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173817 [Multi-domain]  Cd Length: 222  Bit Score: 62.36  E-value: 1.38e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 180 VVVTILDDGIERNHPDLAPNydsyASYDVNGNDYDPSPRYD-ASNENKHGTRCAGEVAASAnnSYCIVGIAynakigGIR 258
Cdd:cd07492     2 VRVAVIDSGVDTDHPDLGNL----ALDGEVTIDLEIIVVSAeGGDKDGHGTACAGIIKKYA--PEAEIGSI------KIL 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 259 MLDGDVTDVVEAKSLG-IRPNYIDIYSASWGPDDDGKTVdgpgrLAKQAFEYGIKKGRqglgsIFVWASGNGGREGdhcS 337
Cdd:cd07492    70 GEDGRCNSFVLEKALRaCVENDIRIVNLSLGGPGDRDFP-----LLKELLEYAYKAGG-----IIVAAAPNNNDIG---T 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 338 CDGYTNSIytISVSSTTENGHKP-WYLEECASTLATTYSSGAFYERKIVTtdlrqrctdghTGTSVSAPMVAGIIALALE 416
Cdd:cd07492   137 PPASFPNV--IGVKSDTADDPKSfWYIYVEFSADGVDIIAPAPHGRYLTV-----------SGNSFAAPHVTGMVALLLS 203
                         250
                  ....*....|....*....
gi 1958642725 417 ANNQLTWRDVQHLLVKTSR 435
Cdd:cd07492   204 EKPDIDANDLKRLLQRLAV 222
Peptidases_S8_11 cd04843
Peptidase S8 family domain, uncharacterized subfamily 11; This family is a member of the ...
165-415 1.48e-10

Peptidase S8 family domain, uncharacterized subfamily 11; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173792  Cd Length: 277  Bit Score: 63.10  E-value: 1.48e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 165 MNVQAAWKR-GYTGKNVVVTILDDGIERNHPDLAPNYDSyasydvngndydPSPRYDASNENKHGTRCAGEVAAsANNSY 243
Cdd:cd04843     2 INARYAWTKpGGSGQGVTFVDIEQGWNLNHEDLVGNGIT------------LISGLTDQADSDHGTAVLGIIVA-KDNGI 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 244 CIVGIAYNAKIG--GIRMLDGDVTDVVEAKSLgIRPNYIDIYSASWGPDDDGkTVDGPGRLAKQAFEyGIKKGRQgLGSI 321
Cdd:cd04843    69 GVTGIAHGAQAAvvSSTRVSNTADAILDAADY-LSPGDVILLEMQTGGPNNG-YPPLPVEYEQANFD-AIRTATD-LGII 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 322 FVWASGNGGREGDHCS-CDGYTNSIYTISVS---------STTENGHKPWYLE------ECAS---TLATTYSSGAFYER 382
Cdd:cd04843   145 VVEAAGNGGQDLDAPVyNRGPILNRFSPDFRdsgaimvgaGSSTTGHTRLAFSnygsrvDVYGwgeNVTTTGYGDLQDLG 224
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1958642725 383 kivttDLRQRCTDGHTGTSVSAPMVAGiiALAL 415
Cdd:cd04843   225 -----GENQDYTDSFSGTSSASPIVAG--AAAS 250
Peptidases_S8_6 cd07490
Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the ...
180-435 2.95e-10

Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173815 [Multi-domain]  Cd Length: 254  Bit Score: 61.80  E-value: 2.95e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 180 VVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSPrydaSNENKHGTRCAGEVAASANNSYCIvGIAYNAKIGGIRM 259
Cdd:cd07490     2 VTVAVLDTGVDADHPDLAGRVAQWADFDENRRISATEV----FDAGGHGTHVSGTIGGGGAKGVYI-GVAPEADLLHGKV 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 260 LDGD---VTDVVEAKSLGIRPNyIDIYSASWGPDD--DGKTVDGPGRLAKQAfeygikkgrqglGSIFVWASGNGGreGD 334
Cdd:cd07490    77 LDDGggsLSQIIAGMEWAVEKD-ADVVSMSLGGTYysEDPLEEAVEALSNQT------------GALFVVSAGNEG--HG 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 335 HCSCDGYTNSiyTISVSSTTENGHKPWYlEECASTLATTYSSGAFYERKIVTTDL-----------RQRCTDGH----TG 399
Cdd:cd07490   142 TSGSPGSAYA--ALSVGAVDRDDEDAWF-SSFGSSGASLVSAPDSPPDEYTKPDVaapgvdvysarQGANGDGQytrlSG 218
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1958642725 400 TSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSR 435
Cdd:cd07490   219 TSMAAPHVAGVAALLAAAHPDLSPEQIKDALTETAY 254
Peptidases_S8_PCSK9_ProteinaseK_like cd04077
Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of ...
175-436 3.22e-10

Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.


Pssm-ID: 173790 [Multi-domain]  Cd Length: 255  Bit Score: 61.76  E-value: 3.22e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 175 YTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPsprydasneNKHGTRCAGEVAASannsycIVGIAYNAKI 254
Cdd:cd04077    22 STGSGVDVYVLDTGIRTTHVEFGGRAIWGADFVGGDPDSDC---------NGHGTHVAGTVGGK------TYGVAKKANL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 255 GGIRMLD----GDVTDVVEAkslgirpnyIDiYSASWGPDDDGKTV-----DGPG-----RLAKQAFEYGIkkgrqglgs 320
Cdd:cd04077    87 VAVKVLDcngsGTLSGIIAG---------LE-WVANDATKRGKPAVanmslGGGAstaldAAVAAAVNAGV--------- 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 321 IFVWASGNGGRegDHCscdGYT--NSIYTISVSSTTENGHKPWYLE--ECASTLAttysSGAfyerKIVTTDLRQ-RCTD 395
Cdd:cd04077   148 VVVVAAGNSNQ--DAC---NYSpaSAPEAITVGATDSDDARASFSNygSCVDIFA----PGV----DILSAWIGSdTATA 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1958642725 396 GHTGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRP 436
Cdd:cd04077   215 TLSGTSMAAPHVAGLAAYLLSLGPDLSPAEVKARLLNLATK 255
FU smart00261
Furin-like repeats;
724-770 3.31e-10

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 55.98  E-value: 3.31e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1958642725  724 ARRCRRCHKGCETCTGRSPTQCLSCRRGFYHHQetNTCVTLCPAGLY 770
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLDG--GKCVSECPPGTY 45
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
730-779 1.38e-09

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 54.45  E-value: 1.38e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1958642725 730 CHKGCETCTGRSPTQCLSCRRGFYHHQetNTCVTLCPAGLYADESQRLCL 779
Cdd:cd00064     2 CHPSCATCTGPGPDQCTSCRHGFYLDG--GTCVSECPEGTYADTEGGVCL 49
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
676-728 2.39e-09

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 53.68  E-value: 2.39e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1958642725 676 CHPECgdKGCDGPSADQCLNCVHFSLGNsktNRKCVSECPLGYFGDTAARRCR 728
Cdd:cd00064     2 CHPSC--ATCTGPGPDQCTSCRHGFYLD---GGTCVSECPEGTYADTEGGVCL 49
Peptidases_S8_14 cd07497
Peptidase S8 family domain, uncharacterized subfamily 14; This family is a member of the ...
177-433 4.78e-09

Peptidase S8 family domain, uncharacterized subfamily 14; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173821 [Multi-domain]  Cd Length: 311  Bit Score: 59.02  E-value: 4.78e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 177 GKNVVVTILDDGIERNHPDLAP--NYDSYASYDVNGNDY---DPSPRYDA--SNENKHGTRCAGEVAASANNSY------ 243
Cdd:cd07497     1 GEGVVIAIVDTGVDYSHPDLDIygNFSWKLKFDYKAYLLpgmDKWGGFYVimYDFFSHGTSCASVAAGRGKMEYnlygyt 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 244 ---CIVGIAYNAKIGGIRMLDGDVTDVVEAKSLGIRPNY------------IDIYSASWGPDDDGKTVDGPGRLAKQAFE 308
Cdd:cd07497    81 gkfLIRGIAPDAKIAAVKALWFGDVIYAWLWTAGFDPVDrklswiytggprVDVISNSWGISNFAYTGYAPGLDISSLVI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 309 YGIKKGRqglGSIFVWASGNGGRegdhcscdGYTN------SIYTISVSSTTENGHKPWYLeecasTLATTYSSG---AF 379
Cdd:cd07497   161 DALVTYT---GVPIVSAAGNGGP--------GYGTitapgaASLAISVGAATNFDYRPFYL-----FGYLPGGSGdvvSW 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 380 YER-----KIVTTDLRQ---------RCTDGHT------------GTSVSAPMVAGIIALALEANNQLTWRD-VQHLLVK 432
Cdd:cd07497   225 SSRgpsiaGDPKPDLAAigafawapgRVLDSGGaldgneafdlfgGTSMATPMTAGSAALVISALKEKEGVGeYDPFLVR 304

                  .
gi 1958642725 433 T 433
Cdd:cd07497   305 T 305
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
663-746 5.22e-09

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 55.46  E-value: 5.22e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 663 SIQGSPNTLQTSV----CHPEC----GDKGCDGPSADQCLNCVHFslgnsKTNRKCVSECPLGYFGD--------TAARR 726
Cdd:pfam14843  37 ILQGEPREYVVNStcvpCHPEClpqnGTATCSGPGADNCTKCAHF-----RDGPHCVSSCPSGVLGEndliwkyaDANGV 111
                          90       100
                  ....*....|....*....|.
gi 1958642725 727 CRRCHKGC-ETCTGRSPTQCL 746
Cdd:pfam14843 112 CQPCHPNCtQGCTGPGLTGCP 132
FU smart00261
Furin-like repeats;
825-867 5.82e-09

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 52.51  E-value: 5.82e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1958642725  825 RCGECHHTCRTCVGPSREECIHCAKSFHFQDWKCVPACGEGFY 867
Cdd:smart00261   3 ECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKCVSECPPGTY 45
VSP pfam03302
Giardia variant-specific surface protein;
673-918 1.45e-08

Giardia variant-specific surface protein;


Pssm-ID: 146106 [Multi-domain]  Cd Length: 397  Bit Score: 58.06  E-value: 1.45e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 673 TSVCHPECGDKGC--DGPSADQCLNCVHFSLGNSKT--NRKCVSECPLGYFGDTAArrCRRCHKGCETCTGRSPTQCLSC 748
Cdd:pfam03302  51 TSQCIDDCAKIGNyyYTTNANNKKICKECTVANCKTceDQGQCQACNDGFYKSGDA--CSPCHESCKTCSGGTASDCTEC 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 749 RRGF---YHHQETN-----TCVTLCPAGlyADESQRLCLRCHPSCQKCVDEPE--KCTVCKEGFSLARGSC----IPDCE 814
Cdd:pfam03302 129 LTGKalrYGNDGTKgtcgeGCTTGTGAG--ACKTCGLTIDGTSYCSECATETEypQNGVCTSTAARATATCkassVANGM 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 815 PGTYFDSELIRCGECHHTCR-----TCVG-PSREECIHCAKSFHFQDWKCVP---------------ACGEGFYPEEmpg 873
Cdd:pfam03302 207 CSSCANGYFRMNGGCYETTKfpgksVCEEaNSGGTCQKEAPGYKLNNGDLVTcspgcktctsntvctTCMDGYVKTS--- 283
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1958642725 874 lphKVCRRCDENCLSCEGSSRNCSRCKAGFTQLGTSCITNHTCSN 918
Cdd:pfam03302 284 ---DSCTKCDSSCETCTGATTTCKTCATGYYKSGTGCVSCTSSES 325
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
781-826 3.05e-08

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 50.60  E-value: 3.05e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1958642725 781 CHPSCQKCVDE-PEKCTVCKEGFSLARGSCIPDCEPGTYFDSELIRC 826
Cdd:cd00064     2 CHPSCATCTGPgPDQCTSCRHGFYLDGGTCVSECPEGTYADTEGGVC 48
Peptidases_S8_C5a_Peptidase cd07475
Peptidase S8 family domain in Streptococcal C5a peptidases; Streptococcal C5a peptidase (SCP), ...
169-438 3.47e-08

Peptidase S8 family domain in Streptococcal C5a peptidases; Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173801 [Multi-domain]  Cd Length: 346  Bit Score: 56.51  E-value: 3.47e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 169 AAW-KRGYTGKNVVVTILDDGIERNHPDLA---------------------PNYDSYAS------YDVNGNDYDPSPRYD 220
Cdd:cd07475     1 PLWdKGGYKGEGMVVAVIDSGVDPTHDAFRldddskakyseefeakkkkagIGYGKYYNekvpfaYNYADNNDDILDEDD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 221 ASNenkHGTRCAGEVAASANNSYC---IVGIAYNAKIGGIRMLD-----GDVTDVV-----EAKSLGirpnyIDIYSASW 287
Cdd:cd07475    81 GSS---HGMHVAGIVAGNGDEEDNgegIKGVAPEAQLLAMKVFSnpeggSTYDDAYakaieDAVKLG-----ADVINMSL 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 288 GPDDDGKTVDGPGrlaKQAFEYGIKKGrqglgsIFVWAS-GNGGREG-DHCSCDGYTNSIY-----------TISVSSTT 354
Cdd:cd07475   153 GSTAGFVDLDDPE---QQAIKRAREAG------VVVVVAaGNDGNSGsGTSKPLATNNPDTgtvgspataddVLTVASAN 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 355 ENGHKPwyleeCASTLATTYSSGafyerkiVTTDLRQR-------------CTDGH----TGTSVSAPMVAGIIALALEA 417
Cdd:cd07475   224 KKVPNP-----NGGQMSGFSSWG-------PTPDLDLKpditapggniystVNDNTygymSGTSMASPHVAGASALVKQR 291
                         330       340
                  ....*....|....*....|....*....
gi 1958642725 418 ----NNQLTWRD----VQHLLVKTSRPAH 438
Cdd:cd07475   292 lkekYPKLSGEElvdlVKNLLMNTATPPL 320
Furin-like_2 pfam15913
Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a ...
709-778 4.92e-08

Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a variety of proteins from eukaryotes that are involved in the mechanism of signal transduction by receptor tyrosine kinases, which involves receptor aggregation.


Pssm-ID: 464939 [Multi-domain]  Cd Length: 102  Bit Score: 51.66  E-value: 4.92e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958642725 709 KCVSECPLGYFG--DTAARRCRRCH-KGCETCTGRspTQCLSCRRGFYHHQetNTCVTLCPAGLYADESQRLC 778
Cdd:pfam15913  34 VCLHSCPPGYFGirGQEVNRCTKCKaENCESCFSK--DFCTKCKEGFYLHK--GKCLDTCPEGTAAQNSTMEC 102
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
828-870 8.20e-08

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 49.44  E-value: 8.20e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1958642725 828 ECHHTCRTCVGPSREECIHCAKSFHFQDWKCVPACGEGFYPEE 870
Cdd:cd00064     1 PCHPSCATCTGPGPDQCTSCRHGFYLDGGTCVSECPEGTYADT 43
PTZ00262 PTZ00262
subtilisin-like protease; Provisional
182-430 8.68e-08

subtilisin-like protease; Provisional


Pssm-ID: 240338 [Multi-domain]  Cd Length: 639  Bit Score: 56.13  E-value: 8.68e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 182 VTILDDGIERNHPDLAPNY----------------------DSYASYDVNGNDydpspryDASNENKHGTRCAGEVAASA 239
Cdd:PTZ00262  320 ICVIDSGIDYNHPDLHDNIdvnvkelhgrkgidddnngnvdDEYGANFVNNDG-------GPMDDNYHGTHVSGIISAIG 392
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 240 NNSYCIVGIAYNAKIGGIRMLD----GDVTDVVEAKSLGIRPNyIDIYSASWGPDDDGKTVDgpgrlakQAFEYgikkgR 315
Cdd:PTZ00262  393 NNNIGIVGVDKRSKLIICKALDshklGRLGDMFKCFDYCISRE-AHMINGSFSFDEYSGIFN-------ESVKY-----L 459
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 316 QGLGSIFVWASGN----GGREGDHCSCDGYTNSIY----------TISVSSTTE--NGHKPWYLEECASTLattYSSGAF 379
Cdd:PTZ00262  460 EEKGILFVVSASNcshtKESKPDIPKCDLDVNKVYppilskklrnVITVSNLIKdkNNQYSLSPNSFYSAK---YCQLAA 536
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1958642725 380 YERKIVTTDLRQRCTDGhTGTSVSAPMVAGIIALALEANNQLTWRDVQHLL 430
Cdd:PTZ00262  537 PGTNIYSTFPKNSYRKL-NGTSMAAPHVAAIASLILSINPSLSYEEVIRIL 586
FU smart00261
Furin-like repeats;
778-818 1.59e-07

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 48.66  E-value: 1.59e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1958642725  778 CLRCHPSCQKCVD-EPEKCTVCKEGFSLARGSCIPDCEPGTY 818
Cdd:smart00261   4 CKPCHPECATCTGpGPDDCTSCKHGFFLDGGKCVSECPPGTY 45
Peptidases_S53 cd04056
Peptidase domain in the S53 family; Members of the peptidases S53 (sedolisin) family include ...
174-420 2.10e-07

Peptidase domain in the S53 family; Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.


Pssm-ID: 173788 [Multi-domain]  Cd Length: 361  Bit Score: 54.24  E-value: 2.10e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 174 GYTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSprYDASNENKHGTRCAGEvaASANNSYcIVGIAYNAK 253
Cdd:cd04056    17 GYTGSGQTIGIIEFGGGYYNPSDLQTFFQLFGLPAPTVFIVVV--IGGGNAPGTSSGWGGE--ASLDVEY-AGAIAPGAN 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 254 I----GGIRMLDGDVTDVVEAksLGIRPNYIDIYSASWG------PDDDGKTVDgpgRLAKQAfeygikkGRQGLgSIFV 323
Cdd:cd04056    92 ItlyfAPGTVTNGPLLAFLAA--VLDNPNLPSVISISYGepeqslPPAYAQRVC---NLFAQA-------AAQGI-TVLA 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 324 wASGNGGREGDHCSCDGYTNSI-------YTISVSSTT---ENGHKPWYLEECASTLATTYSSGAF--------YERKIV 385
Cdd:cd04056   159 -ASGDSGAGGCGGDGSGTGFSVsfpasspYVTAVGGTTlytGGTGSSAESTVWSSEGGWGGSGGGFsnyfprpsYQSGAV 237
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958642725 386 TTDLRQ-------RCT-------DGHT--------------GTSVSAPMVAGIIALALEANNQ 420
Cdd:cd04056   238 LGLPPSglyngsgRGVpdvaanaDPGTgylvvvngqwylvgGTSAAAPLFAGLIALINQARLA 300
FU smart00261
Furin-like repeats;
676-719 3.93e-07

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 47.50  E-value: 3.93e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 1958642725  676 CHPECgdKGCDGPSADQCLNCVHfslGNSKTNRKCVSECPLGYF 719
Cdd:smart00261   7 CHPEC--ATCTGPGPDDCTSCKH---GFFLDGGKCVSECPPGTY 45
Furin-like pfam00757
Furin-like cysteine rich region;
676-787 4.86e-07

Furin-like cysteine rich region;


Pssm-ID: 395614 [Multi-domain]  Cd Length: 143  Bit Score: 50.13  E-value: 4.86e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 676 CHPEC-GdkGCDGPSADQCLNCVHFSLGNSktnrkCVSECPLGYFgdTAARRCrrchkgcetctgRSPTQCLSCRRGFYH 754
Cdd:pfam00757  49 CHEQClG--GCTGPNDSDCLACRHFNDEGT-----CVDQCPPGTY--QFGWRC------------VTFKECPKSHLPGYN 107
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1958642725 755 H--QETNTCVTLCPAGLYADESQ-RLCLRCHPSCQK 787
Cdd:pfam00757 108 PlvIHNGECVRECPSGYTEVENNsRKCEPCEGLCPK 143
Peptidases_S8_2 cd07488
Peptidase S8 family domain, uncharacterized subfamily 2; This family is a member of the ...
199-416 8.91e-07

Peptidase S8 family domain, uncharacterized subfamily 2; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173813  Cd Length: 247  Bit Score: 51.32  E-value: 8.91e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 199 NYD----SYASYDVNGNDYDPSPRYDASN-ENKHGTRCAGeVAASANNSYCIVGIaYNAKIG-----GIRMldgdvtdvv 268
Cdd:cd07488     6 LWDkndsKNAPNTLAAVFIRNNPRFGRNNtFDDHATLVAS-IMGGRDGGLPAVNL-YSSAFGiksnnGQWQ--------- 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 269 EAKSLGIRPNYIDIYSASWGpddDGKTVDGPGRLAKQAFE-YGIKKGRQGLGSIFVWASGNGGREG-DHCSCDGYTNSIY 346
Cdd:cd07488    75 ECLEAQQNGNNVKIINHSYG---EGLKRDPRAVLYGYALLsLYLDWLSRNYEVINVFSAGNQGKEKeKFGGISIPTLAYN 151
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958642725 347 TISVSSTTENGHkPWYleecASTLATTYSSGAFYERKIVT-------TDLRQRCTDGHTGTSVSAPMVAGIIALALE 416
Cdd:cd07488   152 SIVVGSTDRNGD-RFF----ASDVSNAGSEINSYGRRKVLivapgsnYNLPDGKDDFVSGTSFSAPLVTGIIALLLE 223
Furin-like_2 pfam15913
Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a ...
732-817 9.41e-07

Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a variety of proteins from eukaryotes that are involved in the mechanism of signal transduction by receptor tyrosine kinases, which involves receptor aggregation.


Pssm-ID: 464939 [Multi-domain]  Cd Length: 102  Bit Score: 48.20  E-value: 9.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 732 KGCETCTGRSptQCLSCRRGFYHHQETN------TCVTLCPAGLYADESQRL--CLRCH-PSCQKCVDEpEKCTVCKEGF 802
Cdd:pfam15913   2 SGCVLCSEEN--GCLTCQPRLFLLLERNgirqygVCLHSCPPGYFGIRGQEVnrCTKCKaENCESCFSK-DFCTKCKEGF 78
                          90
                  ....*....|....*
gi 1958642725 803 SLARGSCIPDCEPGT 817
Cdd:pfam15913  79 YLHKGKCLDTCPEGT 93
Peptidases_S53_like cd05562
Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include ...
174-470 5.27e-06

Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.


Pssm-ID: 173798 [Multi-domain]  Cd Length: 275  Bit Score: 49.21  E-value: 5.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 174 GYTGKNVVVTILDDGIERnhpdLAPNYDSYASYDVNGNDYDPSPRYDASNENKHGTRCAG---EVAASANNSYCIVGIAY 250
Cdd:cd05562     1 GVDGTGIKIGVISDGFDG----LGDAADDQASGDLPGNVNVLGDLDGGSGGGDEGRAMLEiihDIAPGAELAFHTAGGGE 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 251 NAKIGGIRML-DGDVTDVVEakslgirpnyiDIYSASWGPDDDGKTVDGPGRLAKQAfeygikkgrqglGSIFVWASGNG 329
Cdd:cd05562    77 LDFAAAIRALaAAGADIIVD-----------DIGYLNEPFFQDGPIAQAVDEVVASP------------GVLYFSSAGND 133
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 330 GREGdhcSCDGYTNSIYTISVSSTtenGHKPWYLEECASTLATTYSSGAFYERKIVTTDLRQR---------------CT 394
Cdd:cd05562   134 GQSG---SIFGHAAAPGAIAVGAV---DYGNTPAFGSDPAPGGTPSSFDPVGIRLPTPEVRQKpdvtapdgvngtvdgDG 207
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958642725 395 DGH---TGTSVSAPMVAGIIALALEANNQLTWRDVQHLLVKTSRPAHlkasdwkvngaGHKVSHLYGFGLVDAEALVLE 470
Cdd:cd05562   208 DGPpnfFGTSAAAPHAAGVAALVLSANPGLTPADIRDALRSTALDMG-----------EPGYDNASGSGLVDADRAVAA 275
VSP pfam03302
Giardia variant-specific surface protein;
712-900 2.07e-05

Giardia variant-specific surface protein;


Pssm-ID: 146106 [Multi-domain]  Cd Length: 397  Bit Score: 48.04  E-value: 2.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 712 SECPLGYFGDTAARRCRRCHK----GCETCTGRSPTQCLSCRRGFYhHQETNTCVTLC---PAGLYADESQ--RLCLRCH 782
Cdd:pfam03302   2 DECKPGYELSADKTKCTSSAPckteNCKACSNDKREVCEECNSNNY-LTPTSQCIDDCakiGNYYYTTNANnkKICKECT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 783 PSCQKCVDEPEKCTVCKEGFSLARGSCIPdcepgtyfdselircgeCHHTCRTCVGPSREECIHC--AKSFHFQDWKCVP 860
Cdd:pfam03302  81 VANCKTCEDQGQCQACNDGFYKSGDACSP-----------------CHESCKTCSGGTASDCTECltGKALRYGNDGTKG 143
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1958642725 861 ACGEGFYPEEMPGlphkVCRRCDencLSCEGSSRnCSRCK 900
Cdd:pfam03302 144 TCGEGCTTGTGAG----ACKTCG---LTIDGTSY-CSECA 175
Peptidases_S8_7 cd07491
Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the ...
176-415 5.09e-05

Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173816  Cd Length: 247  Bit Score: 45.79  E-value: 5.09e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 176 TGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYD-PSPRYDASneNKHGT---RCAGEVaasanNSYCIVGIA-- 249
Cdd:cd07491     1 LLKRIKVALIDDGVDILDSDLQGKIIGGKSFSPYEGDGNkVSPYYVSA--DGHGTamaRMICRI-----CPSAKLYVIkl 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 250 --YNAKIGGIRMLD-GDVTDVVEAkslGIRPNyIDIYSASWGPDDDGKTVDGPGRLAKqAFEYGIKKGRQGLGSifvwAS 326
Cdd:cd07491    74 edRPSPDSNKRSITpQSAAKAIEA---AVEKK-VDIISMSWTIKKPEDNDNDINELEN-AIKEALDRGILLFCS----AS 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 327 GNGGREGDHCSCDGYTNSIYTISVSSTTENGHKPWYLEEcastlATTY--------SSGAFYERKIVTTdlrqrctdgHT 398
Cdd:cd07491   145 DQGAFTGDTYPPPAARDRIFRIGAADEDGGADAPVGDED-----RVDYilpgenveARDRPPLSNSFVT---------HT 210
                         250
                  ....*....|....*..
gi 1958642725 399 GTSVSAPMVAGIIALAL 415
Cdd:cd07491   211 GSSVATALAAGLAALIL 227
Peptidases_S8_CspA-like cd07478
Peptidase S8 family domain in CspA-like proteins; GSP (germination-specific protease) converts ...
175-254 7.20e-05

Peptidase S8 family domain in CspA-like proteins; GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173804 [Multi-domain]  Cd Length: 455  Bit Score: 46.46  E-value: 7.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 175 YTGKNVVVTILDDGIERNHPD---------------------LAPNYDSYASYDV---------NGNDYDPSPRYDasnE 224
Cdd:cd07478     1 LTGKGVLVGIIDTGIDYLHPEfrnedgttrilyiwdqtipggPPPGGYYGGGEYTeeiinaalaSDNPYDIVPSRD---E 77
                          90       100       110
                  ....*....|....*....|....*....|
gi 1958642725 225 NKHGTRCAGEVAASANNSYCIVGIAYNAKI 254
Cdd:cd07478    78 NGHGTHVAGIAAGNGDNNPDFKGVAPEAEL 107
Furin-like_2 pfam15913
Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a ...
807-866 7.97e-05

Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a variety of proteins from eukaryotes that are involved in the mechanism of signal transduction by receptor tyrosine kinases, which involves receptor aggregation.


Pssm-ID: 464939 [Multi-domain]  Cd Length: 102  Bit Score: 42.42  E-value: 7.97e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958642725 807 GSCIPDCEPGtYF---DSELIRCGECH-HTCRTCVgpSREECIHCAKSFHFQDWKCVPACGEGF 866
Cdd:pfam15913  33 GVCLHSCPPG-YFgirGQEVNRCTKCKaENCESCF--SKDFCTKCKEGFYLHKGKCLDTCPEGT 93
PLAC pfam08686
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ...
923-946 4.07e-04

PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.


Pssm-ID: 462560  Cd Length: 31  Bit Score: 38.29  E-value: 4.07e-04
                          10        20
                  ....*....|....*....|....
gi 1958642725 923 FCEMVKSNRLCERKLFIQFCCRTC 946
Cdd:pfam08686   7 NCSLVVQARLCSHKYYRQFCCRSC 30
Peptidases_S8_SKI-1_like cd07479
Peptidase S8 family domain in SKI-1-like proteins; SKI-1 (type I membrane-bound ...
171-415 5.71e-04

Peptidase S8 family domain in SKI-1-like proteins; SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173805 [Multi-domain]  Cd Length: 255  Bit Score: 42.83  E-value: 5.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 171 WKRGYTGKNVVVTILDDGIERNHPDLAPNYDsyasydvngndydpspRYDASNENK------HGTRCAGEVAASanNSYC 244
Cdd:cd07479     1 WQLGYTGAGVKVAVFDTGLAKDHPHFRNVKE----------------RTNWTNEKTlddglgHGTFVAGVIASS--REQC 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 245 iVGIAYNAKIGGIRMLDGDVTD----VVEAKSLGIRPNyIDIYSAS-WGPDddgkTVDGPgrLAKQAFEYGIKkgrqglG 319
Cdd:cd07479    63 -LGFAPDAEIYIFRVFTNNQVSytswFLDAFNYAILTK-IDVLNLSiGGPD----FMDKP--FVDKVWELTAN------N 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958642725 320 SIFVWASGNGG-------REGDHCSCDGYTNSIYTISVSSTTENGHKPWYLEECASTLA---TTYSSGafyerkIVTTDL 389
Cdd:cd07479   129 IIMVSAIGNDGplygtlnNPADQMDVIGVGGIDFDDNIARFSSRGMTTWELPGGYGRVKpdiVTYGSG------VYGSKL 202
                         250       260
                  ....*....|....*....|....*.
gi 1958642725 390 RQRCTdGHTGTSVSAPMVAGIIALAL 415
Cdd:cd07479   203 KGGCR-ALSGTSVASPVVAGAVALLL 227
FU smart00261
Furin-like repeats;
877-911 5.72e-03

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 35.56  E-value: 5.72e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1958642725  877 KVCRRCDENCLSCEGS-SRNCSRCKAGFTQLGTSCI 911
Cdd:smart00261   2 GECKPCHPECATCTGPgPDDCTSCKHGFFLDGGKCV 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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