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Concise Results
Standard Results
Full Results
proline and serine-rich protein 1 isoform X2 [Homo sapiens]
Protein Classification
DUF4476 domain-containing protein ( domain architecture ID 10632145 )
DUF4476 domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
DUF4476
pfam14771 Domain of unknown function (DUF4476);
12-99
8.53e-17
Domain of unknown function (DUF4476);
Pssm-ID: 434196
Cd Length: 91
Bit Score: 76.07
E-value: 8.53e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 12 EIRKV V DL L RY FS WAEPQ LK AMKA -- L QHKMVAV Q pte VVNI L NC F T F SK D K L V AL E LL AS NI I D A QN SRP I E D L F RVN m 89
Cdd:pfam14771 6 DFDQL V EK L KR FS FDDDK LK LLEQ al L NNYFTCS Q --- AAQL L KI F S F DD D R L K AL K LL YP NI V D K QN YEV I I D V F TFS - 81
90
....*....|
gi 2217295128 90 S E K KRCKR IL 99
Cdd:pfam14771 82 S D K DKARE IL 91
PHA03247 super family
cl33720 large tegument protein UL36; Provisional
486-888
8.41e-07
large tegument protein UL36; Provisional
PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.40
E-value: 8.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 486 LF P GLPS P V A NST S T P LTL P VQS P LAT A ASASTSV P VSCGS SA sll R GPH P GTS dlhi SST P AATTL P VMIKTEPTS P T P 565
Cdd:PHA03247 2554 PL P PAAP P A A PDR S V P PPR P APR P SEP A VTSRARR P DAPPQ SA --- R PRA P VDD ---- RGD P RGPAP P SPLPPDTHA P D P 2626
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 566 SAFKGPSHSGN P SHGTLGLSGTLG R AYTSTSVPISLSACLNPA L SGLSSL S T P LNGSN --------- P L S S ISL PP HGSS 636
Cdd:PHA03247 2627 PPPSPSPAANE P DPHPPPTVPPPE R PRDDPAPGRVSRPRRARR L GRAAQA S S P PQRPR rraarptvg S L T S LAD PP PPPP 2706
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 637 TP IAPVFTALPSFTSLTNNFPLTGNPSLN P SVSL P GSLI A TSS T AATSTSLPH P SS TA AVLSGLSAS AP VSAA P FP L NLS 716
Cdd:PHA03247 2707 TP EPAPHALVSATPLPPGPAAARQASPAL P AAPA P PAVP A GPA T PGGPARPAR P PT TA GPPAPAPPA AP AAGP P RR L TRP 2786
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 717 TAVPSLF S VTQG P LSSSNPSY P GFSVSNTPSVT PA LPSFPG L QA P STVAAVT P L P VAATA P SPA P ---- V L PG -- FASAF 790
Cdd:PHA03247 2787 AVASLSE S RESL P SPWDPADP P AAVLAPAAALP PA ASPAGP L PP P TSAQPTA P P P PPGPP P PSL P lggs V A PG gd VRRRP 2866
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 791 S S NFNS A LV A QAGLSSGLQA A GSS V FPGLL S LPGI P GF P QN P S Q S slqelqhn A A AQSALL Q QVHSASALESY P AQ P DGF 870
Cdd:PHA03247 2867 P S RSPA A KP A APARPPVRRL A RPA V SRSTE S FALP P DQ P ER P P Q P -------- Q A PPPPQP Q PQPPPPPQPQP P PP P PPR 2938
410
....*....|....*...
gi 2217295128 871 P SY P S AP G T PFSLQPSL S 888
Cdd:PHA03247 2939 P QP P L AP T T DPAGAGEP S 2956
PHA03247 super family
cl33720 large tegument protein UL36; Provisional
124-552
1.06e-06
large tegument protein UL36; Provisional
PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.02
E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 124 P Y P KGRPSRINGIF P GT P LKKDGEECTNEGK G IAARILG PS KP PP S T YN P HK P V P Y P I P ---- P CRPHATIA P KN E DLSN 199
Cdd:PHA03247 2575 P R P SEPAVTSRARR P DA P PQSARPRAPVDDR G DPRGPAP PS PL PP D T HA P DP P P P S P S P aane P DPHPPPTV P PP E RPRD 2654
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 200 PSK P IQNQTFSTPASQLFSPHG S N P S --- TPA A TP v PT ASPVKAINH P SASAAATVSGMNL L NTVL P VF PG QVSSAVHT P 276
Cdd:PHA03247 2655 DPA P GRVSRPRRARRLGRAAQA S S P P qrp RRR A AR - PT VGSLTSLAD P PPPPPTPEPAPHA L VSAT P LP PG PAAARQAS P 2733
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 277 QP sipn P TVIRT P SL P TA P V T SI h STTTTPV P SIFS G lvsl P GPS A T P T A ATPT P GPTPRSTLGS S EAFAST S A P fts L P 356
Cdd:PHA03247 2734 AL ---- P AAPAP P AV P AG P A T PG - GPARPAR P PTTA G ---- P PAP A P P A A PAAG P PRRLTRPAVA S LSESRE S L P --- S P 2801
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 357 FSTSSSA A STSN P NS A SLSSVFAGL PLP L P PTS Q GLSN P T P ------------- V IA GG ------- S TPSV A G P LGVNS P 416
Cdd:PHA03247 2802 WDPADPP A AVLA P AA A LPPAASPAG PLP P P TSA Q PTAP P P P pgppppslplggs V AP GG dvrrrpp S RSPA A K P AAPAR P 2881
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 417 LLSA L KGFLT S ND T NLINSSALSSAVTSGLASLSSLTL Q NSDSSASA P NKCYA P SAI P T P QRTS T PGL A LFPG l PS PVAN 496
Cdd:PHA03247 2882 PVRR L ARPAV S RS T ESFALPPDQPERPPQPQAPPPPQP Q PQPPPPPQ P QPPPP P PPR P Q P PLAP T TDP A GAGE - PS GAVP 2960
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217295128 497 STSTPLTL P -- V QS P LATAASAST S VPVSCG S SAS L LRGPHPGT S D ------ LH ISST P AATT L 552
Cdd:PHA03247 2961 QPWLGALV P gr V AV P RFRVPQPAP S REAPAS S TPP L TGHSLSRV S S wassla LH EETD P PPVS L 3024
Name
Accession
Description
Interval
E-value
DUF4476
pfam14771 Domain of unknown function (DUF4476);
12-99
8.53e-17
Domain of unknown function (DUF4476);
Pssm-ID: 434196
Cd Length: 91
Bit Score: 76.07
E-value: 8.53e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 12 EIRKV V DL L RY FS WAEPQ LK AMKA -- L QHKMVAV Q pte VVNI L NC F T F SK D K L V AL E LL AS NI I D A QN SRP I E D L F RVN m 89
Cdd:pfam14771 6 DFDQL V EK L KR FS FDDDK LK LLEQ al L NNYFTCS Q --- AAQL L KI F S F DD D R L K AL K LL YP NI V D K QN YEV I I D V F TFS - 81
90
....*....|
gi 2217295128 90 S E K KRCKR IL 99
Cdd:pfam14771 82 S D K DKARE IL 91
PHA03247
PHA03247 large tegument protein UL36; Provisional
486-888
8.41e-07
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.40
E-value: 8.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 486 LF P GLPS P V A NST S T P LTL P VQS P LAT A ASASTSV P VSCGS SA sll R GPH P GTS dlhi SST P AATTL P VMIKTEPTS P T P 565
Cdd:PHA03247 2554 PL P PAAP P A A PDR S V P PPR P APR P SEP A VTSRARR P DAPPQ SA --- R PRA P VDD ---- RGD P RGPAP P SPLPPDTHA P D P 2626
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 566 SAFKGPSHSGN P SHGTLGLSGTLG R AYTSTSVPISLSACLNPA L SGLSSL S T P LNGSN --------- P L S S ISL PP HGSS 636
Cdd:PHA03247 2627 PPPSPSPAANE P DPHPPPTVPPPE R PRDDPAPGRVSRPRRARR L GRAAQA S S P PQRPR rraarptvg S L T S LAD PP PPPP 2706
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 637 TP IAPVFTALPSFTSLTNNFPLTGNPSLN P SVSL P GSLI A TSS T AATSTSLPH P SS TA AVLSGLSAS AP VSAA P FP L NLS 716
Cdd:PHA03247 2707 TP EPAPHALVSATPLPPGPAAARQASPAL P AAPA P PAVP A GPA T PGGPARPAR P PT TA GPPAPAPPA AP AAGP P RR L TRP 2786
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 717 TAVPSLF S VTQG P LSSSNPSY P GFSVSNTPSVT PA LPSFPG L QA P STVAAVT P L P VAATA P SPA P ---- V L PG -- FASAF 790
Cdd:PHA03247 2787 AVASLSE S RESL P SPWDPADP P AAVLAPAAALP PA ASPAGP L PP P TSAQPTA P P P PPGPP P PSL P lggs V A PG gd VRRRP 2866
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 791 S S NFNS A LV A QAGLSSGLQA A GSS V FPGLL S LPGI P GF P QN P S Q S slqelqhn A A AQSALL Q QVHSASALESY P AQ P DGF 870
Cdd:PHA03247 2867 P S RSPA A KP A APARPPVRRL A RPA V SRSTE S FALP P DQ P ER P P Q P -------- Q A PPPPQP Q PQPPPPPQPQP P PP P PPR 2938
410
....*....|....*...
gi 2217295128 871 P SY P S AP G T PFSLQPSL S 888
Cdd:PHA03247 2939 P QP P L AP T T DPAGAGEP S 2956
PHA03247
PHA03247 large tegument protein UL36; Provisional
124-552
1.06e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.02
E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 124 P Y P KGRPSRINGIF P GT P LKKDGEECTNEGK G IAARILG PS KP PP S T YN P HK P V P Y P I P ---- P CRPHATIA P KN E DLSN 199
Cdd:PHA03247 2575 P R P SEPAVTSRARR P DA P PQSARPRAPVDDR G DPRGPAP PS PL PP D T HA P DP P P P S P S P aane P DPHPPPTV P PP E RPRD 2654
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 200 PSK P IQNQTFSTPASQLFSPHG S N P S --- TPA A TP v PT ASPVKAINH P SASAAATVSGMNL L NTVL P VF PG QVSSAVHT P 276
Cdd:PHA03247 2655 DPA P GRVSRPRRARRLGRAAQA S S P P qrp RRR A AR - PT VGSLTSLAD P PPPPPTPEPAPHA L VSAT P LP PG PAAARQAS P 2733
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 277 QP sipn P TVIRT P SL P TA P V T SI h STTTTPV P SIFS G lvsl P GPS A T P T A ATPT P GPTPRSTLGS S EAFAST S A P fts L P 356
Cdd:PHA03247 2734 AL ---- P AAPAP P AV P AG P A T PG - GPARPAR P PTTA G ---- P PAP A P P A A PAAG P PRRLTRPAVA S LSESRE S L P --- S P 2801
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 357 FSTSSSA A STSN P NS A SLSSVFAGL PLP L P PTS Q GLSN P T P ------------- V IA GG ------- S TPSV A G P LGVNS P 416
Cdd:PHA03247 2802 WDPADPP A AVLA P AA A LPPAASPAG PLP P P TSA Q PTAP P P P pgppppslplggs V AP GG dvrrrpp S RSPA A K P AAPAR P 2881
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 417 LLSA L KGFLT S ND T NLINSSALSSAVTSGLASLSSLTL Q NSDSSASA P NKCYA P SAI P T P QRTS T PGL A LFPG l PS PVAN 496
Cdd:PHA03247 2882 PVRR L ARPAV S RS T ESFALPPDQPERPPQPQAPPPPQP Q PQPPPPPQ P QPPPP P PPR P Q P PLAP T TDP A GAGE - PS GAVP 2960
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217295128 497 STSTPLTL P -- V QS P LATAASAST S VPVSCG S SAS L LRGPHPGT S D ------ LH ISST P AATT L 552
Cdd:PHA03247 2961 QPWLGALV P gr V AV P RFRVPQPAP S REAPAS S TPP L TGHSLSRV S S wassla LH EETD P PPVS L 3024
Name
Accession
Description
Interval
E-value
DUF4476
pfam14771 Domain of unknown function (DUF4476);
12-99
8.53e-17
Domain of unknown function (DUF4476);
Pssm-ID: 434196
Cd Length: 91
Bit Score: 76.07
E-value: 8.53e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 12 EIRKV V DL L RY FS WAEPQ LK AMKA -- L QHKMVAV Q pte VVNI L NC F T F SK D K L V AL E LL AS NI I D A QN SRP I E D L F RVN m 89
Cdd:pfam14771 6 DFDQL V EK L KR FS FDDDK LK LLEQ al L NNYFTCS Q --- AAQL L KI F S F DD D R L K AL K LL YP NI V D K QN YEV I I D V F TFS - 81
90
....*....|
gi 2217295128 90 S E K KRCKR IL 99
Cdd:pfam14771 82 S D K DKARE IL 91
PHA03247
PHA03247 large tegument protein UL36; Provisional
486-888
8.41e-07
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.40
E-value: 8.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 486 LF P GLPS P V A NST S T P LTL P VQS P LAT A ASASTSV P VSCGS SA sll R GPH P GTS dlhi SST P AATTL P VMIKTEPTS P T P 565
Cdd:PHA03247 2554 PL P PAAP P A A PDR S V P PPR P APR P SEP A VTSRARR P DAPPQ SA --- R PRA P VDD ---- RGD P RGPAP P SPLPPDTHA P D P 2626
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 566 SAFKGPSHSGN P SHGTLGLSGTLG R AYTSTSVPISLSACLNPA L SGLSSL S T P LNGSN --------- P L S S ISL PP HGSS 636
Cdd:PHA03247 2627 PPPSPSPAANE P DPHPPPTVPPPE R PRDDPAPGRVSRPRRARR L GRAAQA S S P PQRPR rraarptvg S L T S LAD PP PPPP 2706
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 637 TP IAPVFTALPSFTSLTNNFPLTGNPSLN P SVSL P GSLI A TSS T AATSTSLPH P SS TA AVLSGLSAS AP VSAA P FP L NLS 716
Cdd:PHA03247 2707 TP EPAPHALVSATPLPPGPAAARQASPAL P AAPA P PAVP A GPA T PGGPARPAR P PT TA GPPAPAPPA AP AAGP P RR L TRP 2786
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 717 TAVPSLF S VTQG P LSSSNPSY P GFSVSNTPSVT PA LPSFPG L QA P STVAAVT P L P VAATA P SPA P ---- V L PG -- FASAF 790
Cdd:PHA03247 2787 AVASLSE S RESL P SPWDPADP P AAVLAPAAALP PA ASPAGP L PP P TSAQPTA P P P PPGPP P PSL P lggs V A PG gd VRRRP 2866
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 791 S S NFNS A LV A QAGLSSGLQA A GSS V FPGLL S LPGI P GF P QN P S Q S slqelqhn A A AQSALL Q QVHSASALESY P AQ P DGF 870
Cdd:PHA03247 2867 P S RSPA A KP A APARPPVRRL A RPA V SRSTE S FALP P DQ P ER P P Q P -------- Q A PPPPQP Q PQPPPPPQPQP P PP P PPR 2938
410
....*....|....*...
gi 2217295128 871 P SY P S AP G T PFSLQPSL S 888
Cdd:PHA03247 2939 P QP P L AP T T DPAGAGEP S 2956
PHA03247
PHA03247 large tegument protein UL36; Provisional
124-552
1.06e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.02
E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 124 P Y P KGRPSRINGIF P GT P LKKDGEECTNEGK G IAARILG PS KP PP S T YN P HK P V P Y P I P ---- P CRPHATIA P KN E DLSN 199
Cdd:PHA03247 2575 P R P SEPAVTSRARR P DA P PQSARPRAPVDDR G DPRGPAP PS PL PP D T HA P DP P P P S P S P aane P DPHPPPTV P PP E RPRD 2654
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 200 PSK P IQNQTFSTPASQLFSPHG S N P S --- TPA A TP v PT ASPVKAINH P SASAAATVSGMNL L NTVL P VF PG QVSSAVHT P 276
Cdd:PHA03247 2655 DPA P GRVSRPRRARRLGRAAQA S S P P qrp RRR A AR - PT VGSLTSLAD P PPPPPTPEPAPHA L VSAT P LP PG PAAARQAS P 2733
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 277 QP sipn P TVIRT P SL P TA P V T SI h STTTTPV P SIFS G lvsl P GPS A T P T A ATPT P GPTPRSTLGS S EAFAST S A P fts L P 356
Cdd:PHA03247 2734 AL ---- P AAPAP P AV P AG P A T PG - GPARPAR P PTTA G ---- P PAP A P P A A PAAG P PRRLTRPAVA S LSESRE S L P --- S P 2801
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 357 FSTSSSA A STSN P NS A SLSSVFAGL PLP L P PTS Q GLSN P T P ------------- V IA GG ------- S TPSV A G P LGVNS P 416
Cdd:PHA03247 2802 WDPADPP A AVLA P AA A LPPAASPAG PLP P P TSA Q PTAP P P P pgppppslplggs V AP GG dvrrrpp S RSPA A K P AAPAR P 2881
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 417 LLSA L KGFLT S ND T NLINSSALSSAVTSGLASLSSLTL Q NSDSSASA P NKCYA P SAI P T P QRTS T PGL A LFPG l PS PVAN 496
Cdd:PHA03247 2882 PVRR L ARPAV S RS T ESFALPPDQPERPPQPQAPPPPQP Q PQPPPPPQ P QPPPP P PPR P Q P PLAP T TDP A GAGE - PS GAVP 2960
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217295128 497 STSTPLTL P -- V QS P LATAASAST S VPVSCG S SAS L LRGPHPGT S D ------ LH ISST P AATT L 552
Cdd:PHA03247 2961 QPWLGALV P gr V AV P RFRVPQPAP S REAPAS S TPP L TGHSLSRV S S wassla LH EETD P PPVS L 3024
PHA03247
PHA03247 large tegument protein UL36; Provisional
464-880
6.67e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 50.32
E-value: 6.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 464 P NKCY AP SAIPT P Q R TSTP G L A LFPGL P S ----- PV A NS T STP LT L ------ P VQS P LATAASASTSV P VSC G SS A SLLR 532
Cdd:PHA03247 2652 P RDDP AP GRVSR P R R ARRL G R A AQASS P P qrprr RA A RP T VGS LT S ladppp P PPT P EPAPHALVSAT P LPP G PA A ARQA 2731
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 533 G P HPGTS dlhi SST PA ATTL P VMIKTEPTSPT P SAFK GP SHSGN P SHGTL G LSGT L G R AYTSTSVPISL S ACLNPALSGL 612
Cdd:PHA03247 2732 S P ALPAA ---- PAP PA VPAG P ATPGGPARPAR P PTTA GP PAPAP P AAPAA G PPRR L T R PAVASLSESRE S LPSPWDPADP 2807
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 613 SSLSTPLNGSN P LSSI --- S LPP HG S ST P I AP VFTAL P SFT SL TN ------ NFPLTGN P SLNPSVSL P GSLIATSSTAAT 683
Cdd:PHA03247 2808 PAAVLAPAAAL P PAAS pag P LPP PT S AQ P T AP PPPPG P PPP SL PL ggsvap GGDVRRR P PSRSPAAK P AAPARPPVRRLA 2887
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 684 STSLPHPSSTA A VLSGLSASA P VSA AP F P LNLSTAV P SLFSVTQG P LSSSN P SY P GFSVSNTPSVTPALPSF P GLQAPST 763
Cdd:PHA03247 2888 RPAVSRSTESF A LPPDQPERP P QPQ AP P P PQPQPQP P PPPQPQPP P PPPPR P QP P LAPTTDPAGAGEPSGAV P QPWLGAL 2967
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 764 V AAVTPL P v AATA P S PAP VLPGF AS AFSSNFNSA L VAQAGLS S G L q A AGSSVF P GLL SL PGIPGF P QNPSQ S SLQE L QHN 843
Cdd:PHA03247 2968 V PGRVAV P - RFRV P Q PAP SREAP AS STPPLTGHS L SRVSSWA S S L - A LHEETD P PPV SL KQTLWP P DDTED S DADS L FDS 3045
410 420 430
....*....|....*....|....*....|....*..
gi 2217295128 844 AAAQ S allqqvh SAS AL ESY P AQ P DGFPSYPSA P G TP 880
Cdd:PHA03247 3046 DSER S ------- DLE AL DPL P PE P HDPFAHEPD P A TP 3075
PHA03247
PHA03247 large tegument protein UL36; Provisional
147-749
6.86e-05
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.86
E-value: 6.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 147 EE CTNEGK G IAARI L G P SK PP PS tyn P HKP VP Y P I P PC RP HATIAPKNE dl SN P SK P I Q NQTFST P AS qlfs PH G SNPST 226
Cdd:PHA03247 2541 EE LASDDA G DPPPP L P P AA PP AA --- P DRS VP P P R P AP RP SEPAVTSRA -- RR P DA P P Q SARPRA P VD ---- DR G DPRGP 2611
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 227 PAAT P V P TASPVKAINH PS A S A AA TVSGMNLLN TV L P VFPGQVSS A V htpq PSIPN P TVI R TPSLPTAP vtsi H S TTTT P 306
Cdd:PHA03247 2612 APPS P L P PDTHAPDPPP PS P S P AA NEPDPHPPP TV P P PERPRDDP A P ---- GRVSR P RRA R RLGRAAQA ---- S S PPQR P 2683
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 307 VP sifsglvslpgpsatptaatptpgptprstlgss E A FAS T SAPF TSL PFSTSSSAASTSN P NSAS lssvf AGL PLP LP 386
Cdd:PHA03247 2684 RR ---------------------------------- R A ARP T VGSL TSL ADPPPPPPTPEPA P HALV ----- SAT PLP PG 2724
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 387 P TSQGLSN P TPVI A GGSTPSV AGP lgvnspllsalkgfltsndtnlinssalssa V T S G laslssltlqnsdssasapnk 466
Cdd:PHA03247 2725 P AAARQAS P ALPA A PAPPAVP AGP ------------------------------- A T P G --------------------- 2752
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 467 cy A P SAIPT P QR T ST P GLALF P GL P SPVANSTS T P ltl P VQSP L ATAASAST S VPVSCGSS A SL L rgph PGTSD L HISST 546
Cdd:PHA03247 2753 -- G P ARPAR P PT T AG P PAPAP P AA P AAGPPRRL T R --- P AVAS L SESRESLP S PWDPADPP A AV L ---- APAAA L PPAAS 2823
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 547 PA ATTL P vmikte PTS PT P S A --- FK GP SHSGN P SH G TLGLS G TLG R AYT S T S VPISLS A CLN P ALSG L SSLSTP lngs N 623
Cdd:PHA03247 2824 PA GPLP P ------ PTS AQ P T A ppp PP GP PPPSL P LG G SVAPG G DVR R RPP S R S PAAKPA A PAR P PVRR L ARPAVS ---- R 2893
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 624 PLS S IS LPP HGSST P IA P vftalpsftsltnnf PLTGN P SLN P SVSL P GSLIATSSTAATSTSLPH P SSTA A vlsgl S A S 703
Cdd:PHA03247 2894 STE S FA LPP DQPER P PQ P --------------- QAPPP P QPQ P QPPP P PQPQPPPPPPPRPQPPLA P TTDP A ----- G A G 2953
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 2217295128 704 A P VS A A P F P l N L STA VP SLFS V TQGPLSSSN PS YPG f SV S N TP SV T 749
Cdd:PHA03247 2954 E P SG A V P Q P - W L GAL VP GRVA V PRFRVPQPA PS REA - PA S S TP PL T 2997
PRK14951
PRK14951 DNA polymerase III subunits gamma and tau; Provisional
162-289
4.57e-03
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain]
Cd Length: 618
Bit Score: 40.47
E-value: 4.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 162 GPSKP P PSTYN P HK P V --- P YPI P PCRPH A TI AP K nedlsn PSKPIQNQTFST P ASQLFSPHGSN P STP A ATPV P T A S P V 238
Cdd:PRK14951 370 AEAAA P AEKKT P AR P E aaa P AAA P VAQAA A AP AP A ------ AAPAAAASAPAA P PAAAPPAPVAA P AAA A PAAA P A A A P A 443
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2217295128 239 KAINH P SAS A A A TVSGMNLLNT V L P VFPGQVSSAVHTPQ P si PNPTVIR T P 289
Cdd:PRK14951 444 AVALA P APP A Q A APETVAIPVR V A P EPAVASAAPAPAAA P -- AAARLTP T E 492
PRK12727
PRK12727 flagellar biosynthesis protein FlhF;
167-307
8.37e-03
flagellar biosynthesis protein FlhF;
Pssm-ID: 237182 [Multi-domain]
Cd Length: 559
Bit Score: 39.59
E-value: 8.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217295128 167 PPSTYNPHK P V P Y P IP P CR P H A TIAPKNEDLS N p SKPI Q N Q TFSTP A SQLFSPHGSNPSTPAATPV P T A S PV K A INH PS A 246
Cdd:PRK12727 60 SDTPATAAA P A P A P QA P TK P A A PVHAPLKLSA N - ANMS Q R Q RVASA A EDMIAAMALRQPVSVPRQA P A A A PV R A ASI PS P 138
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217295128 247 S A A ----- A T V SGMNLLNTV L PVF P G Q VSSAVH T p QPSI P NPT V IRTPSLPT APV TS I HSTTTTPV 307
Cdd:PRK12727 139 A A Q alaha A A V RTAPRQEHA L SAV P E Q LFADFL T - TAPV P RAP V QAPVVAAP APV PA I AAALAAHA 203
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
