|
Name |
Accession |
Description |
Interval |
E-value |
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
41-419 |
3.15e-75 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
:
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 246.36 E-value: 3.15e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 41 TQAQVVICGGGITGTSVAYHLSKMGWkDIVLLEQGRLAAGSTRFCAGILST---ARHLTIEQKMADYSNKLYHQLEQETG 117
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGL-DVTVLERGRPGSGASGRNAGQLRPglaALADRALVRLAREALDLWRELAAELG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 118 IQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALAS 197
Cdd:COG0665 80 IDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRALAR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 198 AASQNGVQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGlsNEEPVSIPLHACEHFYLLTRPLETPL 277
Cdd:COG0665 160 AARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLL--PMLGLRLPLRPVRGYVLVTEPLPDLP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 278 qssTPTIVDaDGRIYIRNWQGG--ILSGGFEKNPkpiftegknqleiQNLQEDWDHFEPLLSSLLRRMPELETLEIMKLV 355
Cdd:COG0665 238 ---LRPVLD-DTGVYLRPTADGrlLVGGTAEPAG-------------FDRAPTPERLEALLRRLRRLFPALADAEIVRAW 300
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217489109 356 NCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKR 419
Cdd:COG0665 301 AGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
463-687 |
8.98e-59 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
:
Pssm-ID: 460255 Cd Length: 254 Bit Score: 198.58 E-value: 8.98e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 463 YDRLDAQGARWMEKHGFERPKYFVPPDKDllaleqsktfykpdwfdiveSEVKCCKEAVCVIDMSSFTKFEITstGDQAL 542
Cdd:pfam01571 1 YDRHVALGAKFVEFAGWEMPVQYGSNGIL--------------------AEHRAVREAAGLFDVSHMGKIEVS--GPDAA 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 543 EVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDsNLLLEDVTWKY 621
Cdd:pfam01571 59 AFLQRLTTNDVSkLKPGRATYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAEKL-DVVVVDVTDDY 137
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 622 TALNLIGPRAVDVLSELSYAPMtPDHFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEFQE 687
Cdd:pfam01571 138 ALLALQGPKAREVLEKLTDGDL-LEALPFFSFREIEIGGVP-VRVSRTGYTGEDGFEIYVPAEDAV 201
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
405-460 |
3.58e-16 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
:
Pssm-ID: 465100 Cd Length: 56 Bit Score: 72.87 E-value: 3.58e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 405 HGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTS 460
Cdd:pfam16350 1 DGEPPIDLWECDIRRFGPHQNNREYLRERVAENYGEVYDIHHPNEEREAGRPLRTS 56
|
|
| NADB_Rossmann super family |
cl21454 |
Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a ... |
5-74 |
3.96e-03 |
|
Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous hydrogen-bonds and van der Waals contacts, in particular H-bonding of residues in a turn between the first strand and the subsequent helix of the Rossmann-fold topology. Characteristically, this turn exhibits a consensus binding pattern similar to GXGXXG, in which the first 2 glycines participate in NAD(P)-binding, and the third facilitates close packing of the helix to the beta-strand. Typically, proteins in this family contain a second domain in addition to the NADB domain, which is responsible for specifically binding a substrate and catalyzing a particular enzymatic reaction.
The actual alignment was detected with superfamily member PTZ00383:
Pssm-ID: 473865 [Multi-domain] Cd Length: 497 Bit Score: 40.11 E-value: 3.96e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 5 RLLSIVGRQRASPGWQNWSSARNSTSAAEARSMALPTQAQ-----VVICGGGITGTSVAYHLSKM-GWKDIVLLEQ 74
Cdd:PTZ00383 3 RIKSSFSRYRSSTLNSNAVKEASRDTSNQSLNTSSGNRLGsdvydVVIVGGGVTGTALFYTLSKFtNLKKIALIER 78
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
41-419 |
3.15e-75 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 246.36 E-value: 3.15e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 41 TQAQVVICGGGITGTSVAYHLSKMGWkDIVLLEQGRLAAGSTRFCAGILST---ARHLTIEQKMADYSNKLYHQLEQETG 117
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGL-DVTVLERGRPGSGASGRNAGQLRPglaALADRALVRLAREALDLWRELAAELG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 118 IQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALAS 197
Cdd:COG0665 80 IDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRALAR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 198 AASQNGVQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGlsNEEPVSIPLHACEHFYLLTRPLETPL 277
Cdd:COG0665 160 AARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLL--PMLGLRLPLRPVRGYVLVTEPLPDLP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 278 qssTPTIVDaDGRIYIRNWQGG--ILSGGFEKNPkpiftegknqleiQNLQEDWDHFEPLLSSLLRRMPELETLEIMKLV 355
Cdd:COG0665 238 ---LRPVLD-DTGVYLRPTADGrlLVGGTAEPAG-------------FDRAPTPERLEALLRRLRRLFPALADAEIVRAW 300
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217489109 356 NCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKR 419
Cdd:COG0665 301 AGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
463-687 |
8.98e-59 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 460255 Cd Length: 254 Bit Score: 198.58 E-value: 8.98e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 463 YDRLDAQGARWMEKHGFERPKYFVPPDKDllaleqsktfykpdwfdiveSEVKCCKEAVCVIDMSSFTKFEITstGDQAL 542
Cdd:pfam01571 1 YDRHVALGAKFVEFAGWEMPVQYGSNGIL--------------------AEHRAVREAAGLFDVSHMGKIEVS--GPDAA 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 543 EVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDsNLLLEDVTWKY 621
Cdd:pfam01571 59 AFLQRLTTNDVSkLKPGRATYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAEKL-DVVVVDVTDDY 137
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 622 TALNLIGPRAVDVLSELSYAPMtPDHFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEFQE 687
Cdd:pfam01571 138 ALLALQGPKAREVLEKLTDGDL-LEALPFFSFREIEIGGVP-VRVSRTGYTGEDGFEIYVPAEDAV 201
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
45-402 |
3.04e-56 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 194.92 E-value: 3.04e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 45 VVICGGGITGTSVAYHLSKMGWkDIVLLEQG-RLAAGSTRFCAGILSTARHLTIEQ---KMADYSNKLYHQLEQETGIQT 120
Cdd:pfam01266 2 VVVIGGGIVGLSTAYELARRGL-SVTLLERGdDPGSGASGRNAGLIHPGLRYLEPSelaRLALEALDLWEELEEELGIDC 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 121 GYTRTGSIFLAQTQDRlISLKRINAGLNVIGIPSEIISPKKVAELHHLLNvhDLVGAMHVPEDAVVSSADVALALASAAS 200
Cdd:pfam01266 81 GFRRCGVLVLARDEEE-EALEKLLAALRRLGVPAELLDAEELRELEPLLP--GLRGGLFYPDGGHVDPARLLRALARAAE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 201 QNGVQIYDRTSVLHVmVKKGQVTGVETDkGQIECqyFVNCAGQWAYELGLSneePVSIPLHACEHFYLLTRPL-ETPLQS 279
Cdd:pfam01266 158 ALGVRIIEGTEVTGI-EEEGGVWGVVTT-GEADA--VVNAAGAWADLLALP---GLRLPVRPVRGQVLVLEPLpEALLIL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 280 STPTIVDADGRIYIRN-WQGGILSGGFEknpkpiFTEGKNQLEIqnlqeDWDHFEPLLSSLLRRMPELETLEimklvncp 358
Cdd:pfam01266 231 PVPITVDPGRGVYLRPrADGRLLLGGTD------EEDGFDDPTP-----DPEEIEELLEAARRLFPALADIE-------- 291
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2217489109 359 ETF-----TPDMRCIMGEsPAVQGYFVLAGMNSAGLSFGGGAGKYLAEW 402
Cdd:pfam01266 292 RAWaglrpLPDGLPIIGR-PGSPGLYLATGHGGHGLTLAPGIGKLLAEL 339
|
|
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
454-687 |
1.66e-41 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 155.24 E-value: 1.66e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 454 GRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVppdkdllaleqsktfykpdwfDIVESEVKCCKEAVCVIDMSSFTKFE 533
Cdd:COG0404 1 FRPLRRTPLHDRHVALGAKFVDFGGWEMPVQYP---------------------GGVIAEHLAVREAVGLFDVSHMGKIE 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 534 ITstGDQALEVLQYLFSNDLDV-PVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNL 612
Cdd:COG0404 60 VT--GPDAAAFLDRLVTNDVSKlKPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEEHLPPDFDV 137
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217489109 613 LLEDVTWKYTALNLIGPRAVDVLSELsyAPMTPDHFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEFQE 687
Cdd:COG0404 138 TITDVTDDWALLAVQGPKAREVLAKL--TDADLSALPFMSFREGTVAGVP-VRVSRTGYTGEDGFEIYVPAEDAE 209
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
405-460 |
3.58e-16 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
Pssm-ID: 465100 Cd Length: 56 Bit Score: 72.87 E-value: 3.58e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 405 HGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTS 460
Cdd:pfam16350 1 DGEPPIDLWECDIRRFGPHQNNREYLRERVAENYGEVYDIHHPNEEREAGRPLRTS 56
|
|
| gcvT |
PRK00389 |
glycine cleavage system aminomethyltransferase GcvT; |
457-684 |
4.32e-14 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 234742 [Multi-domain] Cd Length: 359 Bit Score: 74.38 E-value: 4.32e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 457 LRTSPLYDRLDAQGARWMEKHGFERP-KYfvppdkdllaleQSktfykpdwfdIVEsEVKCCKEAVCVIDMSSFTKFEIT 535
Cdd:PRK00389 2 LKRTPLYDLHVALGAKMVDFGGWEMPvQY------------GS----------IIE-EHHAVRTDAGLFDVSHMGEVDVT 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 536 stGDQALEVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMI--SPTDQQVhcWAWLKKHMpKDSNL 612
Cdd:PRK00389 59 --GPDALAFLQYLLANDVSkLKPGKAQYTCMLNEDGGVIDDLIVYKLSEDEYLLVvnAANREKD--LAWIKSHA-AGFGV 133
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217489109 613 LLEDVTWKYTALNLIGPRAVDVLSELSYAPMtpDHFPSLFCKEMSVGYANGIRVmSMT-HTGEPGFMLYIPIE 684
Cdd:PRK00389 134 EVTDRSDDLAMIAVQGPKAREKLQKLTDADL--SELKPFFGAQGAEVGGGDVLV-ARTgYTGEDGFEIYLPAE 203
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
45-420 |
6.14e-12 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 67.93 E-value: 6.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 45 VVICGGGITGTSVAYHLSKMGwKDIVLLEQGRL--AAGSTRfcaGILSTARHLTIEQ---KMADYSNKLYHQLEQETGIQ 119
Cdd:TIGR01377 3 VIVVGAGIMGCFAAYHLAKHG-KKTLLLEQFDLphSRGSSH---GQSRIIRKAYPEDfytPMMLECYQLWAQLEKEAGTK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 120 TgYTRTGSIFLAQTQDRliSLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALASAA 199
Cdd:TIGR01377 79 L-HRQTGLLLLGPKENQ--FLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLDPNGGVLYAEKALRALQELA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 200 SQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWAYEL--GLSNEEPVSiPLHACEHFYLLTRPLETPL 277
Cdd:TIGR01377 156 EAHGATVRDGTKVVEIEPTELLVT-VKTTKGSYQANKLVVTAGAWTSKLlsPLGIEIPLQ-PLRINVCYWREKEPGSYGV 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 278 QSSTPTIV--DADGRIYirnwqgGILSGGFEKNPKPIFTEGKN----------QLEIQNLQEdwdhfeplLSSLLR-RMP 344
Cdd:TIGR01377 234 SQAFPCFLvlGLNPHIY------GLPSFEYPGLMKVYYHHGQQidpderdcpfGADIEDVQI--------LRKFVRdHLP 299
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217489109 345 EL-ETLEIMKLvnCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKRF 420
Cdd:TIGR01377 300 GLnGEPKKGEV--CMYTNTPDEHFVIDLHPKYDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKPSYDLAIFSLNRF 374
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
44-293 |
9.46e-06 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 48.64 E-value: 9.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 44 QVVICGGGITGTSVAYHLSKMGWKDIVLLEQGRLA-------AG--STRFCA-----GILSTA------RH--------L 95
Cdd:PRK00711 2 RVVVLGSGVIGVTSAWYLAQAGHEVTVIDRQPGPAletsfanAGqiSPGYAApwaapGVPLKAikwlfqRHaplairpdG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 96 TIEQ-----KM-------------------ADYSNKLYHQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIG 151
Cdd:PRK00711 82 DPFQlrwmwQMlrnctasryavnksrmvrlAEYSRDCLKALRAETGIQYEGRQGGTLQLFRTQQQLDAAAKDIAVLEEAG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 152 IPSEIISPKKVAELH-HLLNV-HDLVGAMHVPEDAV-------VSSADvalalasAASQNGVQIYDRTSVLHVMVKKGQV 222
Cdd:PRK00711 162 VPYELLDRDELAAVEpALAGVrHKLVGGLRLPNDETgdcqlftQRLAA-------MAEQLGVKFRFNTPVDGLLVEGGRI 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217489109 223 TGVETDKGQIECQYFVNCAGQWAYEL--GLSNEEPVsIPLHAcehfYLLTRPLETPLQSSTPTIVDADGRIYI 293
Cdd:PRK00711 235 TGVQTGGGVITADAYVVALGSYSTALlkPLGVDIPV-YPLKG----YSLTVPITDEDRAPVSTVLDETYKIAI 302
|
|
| PTZ00383 |
PTZ00383 |
malate:quinone oxidoreductase; Provisional |
5-74 |
3.96e-03 |
|
malate:quinone oxidoreductase; Provisional
Pssm-ID: 240393 [Multi-domain] Cd Length: 497 Bit Score: 40.11 E-value: 3.96e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 5 RLLSIVGRQRASPGWQNWSSARNSTSAAEARSMALPTQAQ-----VVICGGGITGTSVAYHLSKM-GWKDIVLLEQ 74
Cdd:PTZ00383 3 RIKSSFSRYRSSTLNSNAVKEASRDTSNQSLNTSSGNRLGsdvydVVIVGGGVTGTALFYTLSKFtNLKKIALIER 78
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
41-419 |
3.15e-75 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 246.36 E-value: 3.15e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 41 TQAQVVICGGGITGTSVAYHLSKMGWkDIVLLEQGRLAAGSTRFCAGILST---ARHLTIEQKMADYSNKLYHQLEQETG 117
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGL-DVTVLERGRPGSGASGRNAGQLRPglaALADRALVRLAREALDLWRELAAELG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 118 IQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALAS 197
Cdd:COG0665 80 IDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSPDYAGGLYDPDDGHVDPAKLVRALAR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 198 AASQNGVQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGlsNEEPVSIPLHACEHFYLLTRPLETPL 277
Cdd:COG0665 160 AARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLL--PMLGLRLPLRPVRGYVLVTEPLPDLP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 278 qssTPTIVDaDGRIYIRNWQGG--ILSGGFEKNPkpiftegknqleiQNLQEDWDHFEPLLSSLLRRMPELETLEIMKLV 355
Cdd:COG0665 238 ---LRPVLD-DTGVYLRPTADGrlLVGGTAEPAG-------------FDRAPTPERLEALLRRLRRLFPALADAEIVRAW 300
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217489109 356 NCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKR 419
Cdd:COG0665 301 AGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPDR 364
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
463-687 |
8.98e-59 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 460255 Cd Length: 254 Bit Score: 198.58 E-value: 8.98e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 463 YDRLDAQGARWMEKHGFERPKYFVPPDKDllaleqsktfykpdwfdiveSEVKCCKEAVCVIDMSSFTKFEITstGDQAL 542
Cdd:pfam01571 1 YDRHVALGAKFVEFAGWEMPVQYGSNGIL--------------------AEHRAVREAAGLFDVSHMGKIEVS--GPDAA 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 543 EVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDsNLLLEDVTWKY 621
Cdd:pfam01571 59 AFLQRLTTNDVSkLKPGRATYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAEKL-DVVVVDVTDDY 137
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 622 TALNLIGPRAVDVLSELSYAPMtPDHFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEFQE 687
Cdd:pfam01571 138 ALLALQGPKAREVLEKLTDGDL-LEALPFFSFREIEIGGVP-VRVSRTGYTGEDGFEIYVPAEDAV 201
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
45-402 |
3.04e-56 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 194.92 E-value: 3.04e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 45 VVICGGGITGTSVAYHLSKMGWkDIVLLEQG-RLAAGSTRFCAGILSTARHLTIEQ---KMADYSNKLYHQLEQETGIQT 120
Cdd:pfam01266 2 VVVIGGGIVGLSTAYELARRGL-SVTLLERGdDPGSGASGRNAGLIHPGLRYLEPSelaRLALEALDLWEELEEELGIDC 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 121 GYTRTGSIFLAQTQDRlISLKRINAGLNVIGIPSEIISPKKVAELHHLLNvhDLVGAMHVPEDAVVSSADVALALASAAS 200
Cdd:pfam01266 81 GFRRCGVLVLARDEEE-EALEKLLAALRRLGVPAELLDAEELRELEPLLP--GLRGGLFYPDGGHVDPARLLRALARAAE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 201 QNGVQIYDRTSVLHVmVKKGQVTGVETDkGQIECqyFVNCAGQWAYELGLSneePVSIPLHACEHFYLLTRPL-ETPLQS 279
Cdd:pfam01266 158 ALGVRIIEGTEVTGI-EEEGGVWGVVTT-GEADA--VVNAAGAWADLLALP---GLRLPVRPVRGQVLVLEPLpEALLIL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 280 STPTIVDADGRIYIRN-WQGGILSGGFEknpkpiFTEGKNQLEIqnlqeDWDHFEPLLSSLLRRMPELETLEimklvncp 358
Cdd:pfam01266 231 PVPITVDPGRGVYLRPrADGRLLLGGTD------EEDGFDDPTP-----DPEEIEELLEAARRLFPALADIE-------- 291
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2217489109 359 ETF-----TPDMRCIMGEsPAVQGYFVLAGMNSAGLSFGGGAGKYLAEW 402
Cdd:pfam01266 292 RAWaglrpLPDGLPIIGR-PGSPGLYLATGHGGHGLTLAPGIGKLLAEL 339
|
|
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
454-687 |
1.66e-41 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 155.24 E-value: 1.66e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 454 GRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVppdkdllaleqsktfykpdwfDIVESEVKCCKEAVCVIDMSSFTKFE 533
Cdd:COG0404 1 FRPLRRTPLHDRHVALGAKFVDFGGWEMPVQYP---------------------GGVIAEHLAVREAVGLFDVSHMGKIE 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 534 ITstGDQALEVLQYLFSNDLDV-PVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNL 612
Cdd:COG0404 60 VT--GPDAAAFLDRLVTNDVSKlKPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEEHLPPDFDV 137
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217489109 613 LLEDVTWKYTALNLIGPRAVDVLSELsyAPMTPDHFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEFQE 687
Cdd:COG0404 138 TITDVTDDWALLAVQGPKAREVLAKL--TDADLSALPFMSFREGTVAGVP-VRVSRTGYTGEDGFEIYVPAEDAE 209
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
45-245 |
2.23e-20 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 94.06 E-value: 2.23e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 45 VVICGGGITGTSVAYHLSK-MGWKdIVLLEQ-GRLAAGSTRFCAGILstarH--L-----TIEQKMADYSNKLYHQLEQE 115
Cdd:COG0579 7 VVIIGAGIVGLALARELSRyEDLK-VLVLEKeDDVAQESSGNNSGVI----HagLyytpgSLKARLCVEGNELFYELCRE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 116 TGIQtgYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPS-EIISPKKVAELHHLLNvHDLVGAMHVPEDAVVSSADVALA 194
Cdd:COG0579 82 LGIP--FKRCGKLVVATGEEEVAFLEKLYERGKANGVPGlEILDREELRELEPLLS-DEGVAALYSPSTGIVDPGALTRA 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2217489109 195 LASAASQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWA 245
Cdd:COG0579 159 LAENAEANGVELLLNTEVTGIEREGDGWE-VTTNGGTIRARFVINAAGLYA 208
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
405-460 |
3.58e-16 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
Pssm-ID: 465100 Cd Length: 56 Bit Score: 72.87 E-value: 3.58e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 405 HGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTS 460
Cdd:pfam16350 1 DGEPPIDLWECDIRRFGPHQNNREYLRERVAENYGEVYDIHHPNEEREAGRPLRTS 56
|
|
| gcvT |
PRK00389 |
glycine cleavage system aminomethyltransferase GcvT; |
457-684 |
4.32e-14 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 234742 [Multi-domain] Cd Length: 359 Bit Score: 74.38 E-value: 4.32e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 457 LRTSPLYDRLDAQGARWMEKHGFERP-KYfvppdkdllaleQSktfykpdwfdIVEsEVKCCKEAVCVIDMSSFTKFEIT 535
Cdd:PRK00389 2 LKRTPLYDLHVALGAKMVDFGGWEMPvQY------------GS----------IIE-EHHAVRTDAGLFDVSHMGEVDVT 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 536 stGDQALEVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMI--SPTDQQVhcWAWLKKHMpKDSNL 612
Cdd:PRK00389 59 --GPDALAFLQYLLANDVSkLKPGKAQYTCMLNEDGGVIDDLIVYKLSEDEYLLVvnAANREKD--LAWIKSHA-AGFGV 133
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217489109 613 LLEDVTWKYTALNLIGPRAVDVLSELSYAPMtpDHFPSLFCKEMSVGYANGIRVmSMT-HTGEPGFMLYIPIE 684
Cdd:PRK00389 134 EVTDRSDDLAMIAVQGPKAREKLQKLTDADL--SELKPFFGAQGAEVGGGDVLV-ARTgYTGEDGFEIYLPAE 203
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
45-420 |
6.14e-12 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 67.93 E-value: 6.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 45 VVICGGGITGTSVAYHLSKMGwKDIVLLEQGRL--AAGSTRfcaGILSTARHLTIEQ---KMADYSNKLYHQLEQETGIQ 119
Cdd:TIGR01377 3 VIVVGAGIMGCFAAYHLAKHG-KKTLLLEQFDLphSRGSSH---GQSRIIRKAYPEDfytPMMLECYQLWAQLEKEAGTK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 120 TgYTRTGSIFLAQTQDRliSLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALASAA 199
Cdd:TIGR01377 79 L-HRQTGLLLLGPKENQ--FLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLDPNGGVLYAEKALRALQELA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 200 SQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWAYEL--GLSNEEPVSiPLHACEHFYLLTRPLETPL 277
Cdd:TIGR01377 156 EAHGATVRDGTKVVEIEPTELLVT-VKTTKGSYQANKLVVTAGAWTSKLlsPLGIEIPLQ-PLRINVCYWREKEPGSYGV 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 278 QSSTPTIV--DADGRIYirnwqgGILSGGFEKNPKPIFTEGKN----------QLEIQNLQEdwdhfeplLSSLLR-RMP 344
Cdd:TIGR01377 234 SQAFPCFLvlGLNPHIY------GLPSFEYPGLMKVYYHHGQQidpderdcpfGADIEDVQI--------LRKFVRdHLP 299
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217489109 345 EL-ETLEIMKLvnCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKRF 420
Cdd:TIGR01377 300 GLnGEPKKGEV--CMYTNTPDEHFVIDLHPKYDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKPSYDLAIFSLNRF 374
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
44-293 |
9.46e-06 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 48.64 E-value: 9.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 44 QVVICGGGITGTSVAYHLSKMGWKDIVLLEQGRLA-------AG--STRFCA-----GILSTA------RH--------L 95
Cdd:PRK00711 2 RVVVLGSGVIGVTSAWYLAQAGHEVTVIDRQPGPAletsfanAGqiSPGYAApwaapGVPLKAikwlfqRHaplairpdG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 96 TIEQ-----KM-------------------ADYSNKLYHQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIG 151
Cdd:PRK00711 82 DPFQlrwmwQMlrnctasryavnksrmvrlAEYSRDCLKALRAETGIQYEGRQGGTLQLFRTQQQLDAAAKDIAVLEEAG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 152 IPSEIISPKKVAELH-HLLNV-HDLVGAMHVPEDAV-------VSSADvalalasAASQNGVQIYDRTSVLHVMVKKGQV 222
Cdd:PRK00711 162 VPYELLDRDELAAVEpALAGVrHKLVGGLRLPNDETgdcqlftQRLAA-------MAEQLGVKFRFNTPVDGLLVEGGRI 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217489109 223 TGVETDKGQIECQYFVNCAGQWAYEL--GLSNEEPVsIPLHAcehfYLLTRPLETPLQSSTPTIVDADGRIYI 293
Cdd:PRK00711 235 TGVQTGGGVITADAYVVALGSYSTALlkPLGVDIPV-YPLKG----YSLTVPITDEDRAPVSTVLDETYKIAI 302
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
45-422 |
3.08e-05 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 46.75 E-value: 3.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 45 VVICGGGITGTSVAYHLSKMGwKDIVLLEQGRL--AAGS----TRfcagILstaRHLTIEQkmADY------SNKLYHQL 112
Cdd:PRK11259 6 VIVIGLGSMGSAAGYYLARRG-LRVLGLDRFMPphQQGSshgdTR----II---RHAYGEG--PAYvplvlrAQELWREL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 113 EQETGiQTGYTRTGSIFLAQTQDRLISlkrinaglNVI------GIPSEIISPKKVAELHHLLNVHDlvGAMHV------ 180
Cdd:PRK11259 76 ERESG-EPLFVRTGVLNLGPADSDFLA--------NSIrsarqhGLPHEVLDAAEIRRRFPQFRLPD--GYIALfepdgg 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 181 ---PEDAVVSSADVALalasaasQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWAYELgLSneePVS 257
Cdd:PRK11259 145 flrPELAIKAHLRLAR-------EAGAELLFNEPVTAIEADGDGVT-VTTADGTYEAKKLVVSAGAWVKDL-LP---PLE 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 258 IPLHACEH-FYLLTRPLETPLQSSTPtivdadgrIYIRNWQGGILSGGFEKNPKPIFTEGKNQ--LEIQNLQE-----DW 329
Cdd:PRK11259 213 LPLTPVRQvLAWFQADGRYSEPNRFP--------AFIWEVPDGDQYYGFPAENGPGLKIGKHNggQEITSPDErdrfvTV 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 330 DHFEPLLSSLLRR-MPELETLeiMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYP 408
Cdd:PRK11259 285 AEDGAELRPFLRNyLPGVGPC--LRGAACTYTNTPDEHFIIDTLPGHPNVLVASGCSGHGFKFASVLGEILADLAQDGTS 362
|
410
....*....|....
gi 2217489109 409 SENVWELDLKRFGA 422
Cdd:PRK11259 363 DFDLSPFSLSRFAA 376
|
|
| PRK11728 |
PRK11728 |
L-2-hydroxyglutarate oxidase; |
45-242 |
2.55e-04 |
|
L-2-hydroxyglutarate oxidase;
Pssm-ID: 183292 [Multi-domain] Cd Length: 393 Bit Score: 44.04 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 45 VVICGGGITGTSVAYHLSK-MGWKDIVLLE-QGRLAA------------------GS--TRFC-AGilstarhltieqkm 101
Cdd:PRK11728 5 FVIIGGGIVGLSTAMQLQErYPGARIAVLEkESGPARhqtghnsgvihagvyytpGSlkARFCrRG-------------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217489109 102 adysNKLYHQLEQETGIqtGYTRTGSIFLAQTQDRLISLKRI--NAGLNviGIPSEIISPKKVAELHHllNVHDLvGAMH 179
Cdd:PRK11728 71 ----NEATKAFCDQHGI--PYEECGKLLVATSELELERMEALyeRARAN--GIEVERLDAEELREREP--NIRGL-GAIF 139
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217489109 180 VPEDAVVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAG 242
Cdd:PRK11728 140 VPSTGIVDYRAVAEAMAELIQARGGEIRLGAEVTALDEHANGVV-VRTTQGEYEARTLINCAG 201
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
45-75 |
1.10e-03 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 42.13 E-value: 1.10e-03
10 20 30
....*....|....*....|....*....|.
gi 2217489109 45 VVICGGGITGTSVAYHLSKMGwKDIVLLEQG 75
Cdd:COG1232 4 VAVIGGGIAGLTAAYRLAKAG-HEVTVLEAS 33
|
|
| PTZ00383 |
PTZ00383 |
malate:quinone oxidoreductase; Provisional |
5-74 |
3.96e-03 |
|
malate:quinone oxidoreductase; Provisional
Pssm-ID: 240393 [Multi-domain] Cd Length: 497 Bit Score: 40.11 E-value: 3.96e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217489109 5 RLLSIVGRQRASPGWQNWSSARNSTSAAEARSMALPTQAQ-----VVICGGGITGTSVAYHLSKM-GWKDIVLLEQ 74
Cdd:PTZ00383 3 RIKSSFSRYRSSTLNSNAVKEASRDTSNQSLNTSSGNRLGsdvydVVIVGGGVTGTALFYTLSKFtNLKKIALIER 78
|
|
| PRK12409 |
PRK12409 |
D-amino acid dehydrogenase small subunit; Provisional |
44-87 |
6.22e-03 |
|
D-amino acid dehydrogenase small subunit; Provisional
Pssm-ID: 237093 [Multi-domain] Cd Length: 410 Bit Score: 39.62 E-value: 6.22e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2217489109 44 QVVICGGGITGTSVAYHLSKMGWkDIVLLEQGRLAAGSTRFCAG 87
Cdd:PRK12409 3 HIAVIGAGITGVTTAYALAQRGY-QVTVFDRHRYAAMETSFANG 45
|
|
| |
