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Conserved domains on  [gi|2462554782|ref|XP_054171856|]
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SAP30-binding protein isoform X3 [Homo sapiens]

Protein Classification

HCNGP domain-containing protein( domain architecture ID 10544841)

HCNGP domain-containing protein similar to Homo sapiens SAP30-binding protein, also called transcriptional regulator protein HCNGP, that induces cell death

Gene Ontology:  GO:0006355

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HCNGP pfam07818
HCNGP-like protein; This family comprises sequences bearing significant similarity to the ...
 97-188 7.18e-47

HCNGP-like protein; This family comprises sequences bearing significant similarity to the mouse transcriptional regulator protein HCNGP. This protein is localized to the nucleus and is thought to be involved in the regulation of beta-2-microglobulin genes.


:

Pssm-ID: 462281  Cd Length: 91  Bit Score: 152.68  E-value: 7.18e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554782  97 IPPEPPGRCSNHLQDKIQKLYERKiKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYE 176
Cdd:pfam07818   1 IPPSPPGKCPPELQAKFAQFLKLK-KKGIHFNDRLQSSKSFRNPSILEKLVEFVGIDEYGTNLPKDIWDPHGFPEEAYYD 79

                          90
                  ....*....|..
gi 2462554782 177 ALAKAQKIEMDK 188
Cdd:pfam07818  80 ALAKEQKEEMEK 91
 
Name Accession Description Interval E-value
HCNGP pfam07818
HCNGP-like protein; This family comprises sequences bearing significant similarity to the ...
 97-188 7.18e-47

HCNGP-like protein; This family comprises sequences bearing significant similarity to the mouse transcriptional regulator protein HCNGP. This protein is localized to the nucleus and is thought to be involved in the regulation of beta-2-microglobulin genes.


Pssm-ID: 462281  Cd Length: 91  Bit Score: 152.68  E-value: 7.18e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554782  97 IPPEPPGRCSNHLQDKIQKLYERKiKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYE 176
Cdd:pfam07818   1 IPPSPPGKCPPELQAKFAQFLKLK-KKGIHFNDRLQSSKSFRNPSILEKLVEFVGIDEYGTNLPKDIWDPHGFPEEAYYD 79

                          90
                  ....*....|..
gi 2462554782 177 ALAKAQKIEMDK 188
Cdd:pfam07818  80 ALAKEQKEEMEK 91
 
Name Accession Description Interval E-value
HCNGP pfam07818
HCNGP-like protein; This family comprises sequences bearing significant similarity to the ...
 97-188 7.18e-47

HCNGP-like protein; This family comprises sequences bearing significant similarity to the mouse transcriptional regulator protein HCNGP. This protein is localized to the nucleus and is thought to be involved in the regulation of beta-2-microglobulin genes.


Pssm-ID: 462281  Cd Length: 91  Bit Score: 152.68  E-value: 7.18e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554782  97 IPPEPPGRCSNHLQDKIQKLYERKiKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYE 176
Cdd:pfam07818   1 IPPSPPGKCPPELQAKFAQFLKLK-KKGIHFNDRLQSSKSFRNPSILEKLVEFVGIDEYGTNLPKDIWDPHGFPEEAYYD 79

                          90
                  ....*....|..
gi 2462554782 177 ALAKAQKIEMDK 188
Cdd:pfam07818  80 ALAKEQKEEMEK 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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