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Conserved domains on  [gi|400201536|ref|YP_006575923|]
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ATP synthase F0 subunit 8 (mitochondrion) [Baikalospongia intermedia profundalis]

Protein Classification

ATP synthase subunit B family protein( domain architecture ID 10009607)

ATP synthase subunit B family protein such as subunits b and b' from the F(o) complex in F-type ATP synthase (FoF1-ATPase) found in chloroplasts and in bacterial plasma membranes; the b subunits are part of the peripheral stalk that links the F(1) and F(o) complexes together, and which acts as a stator to prevent certain subunits from rotating with the central rotary element

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00169
ATP synthase F0 subunit 8; Provisional
 1-82 9.38e-26

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 214446  Cd Length: 67  Bit Score: 90.04  E-value: 9.38e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 400201536  1 MPQLDTVSFLTQYIWTLITLFFLFSLLVNTILPRLQQQLAIRSRSGAGasprteettkleilaPMGRISPPKAVIFKNLF 80
Cdd:MTH00169  1 MPQLDSVTYLTQYIWTLIILFFLFSLLVNYILPKIQQQLVIRTKGVNS---------------VEGKKERPKIEIFKKLF 65


                ..
gi 400201536 81 QL 82
Cdd:MTH00169 66 DL 67
 
Name Accession Description Interval E-value
ATP8 MTH00169
ATP synthase F0 subunit 8; Provisional
 1-82 9.38e-26

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214446  Cd Length: 67  Bit Score: 90.04  E-value: 9.38e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 400201536  1 MPQLDTVSFLTQYIWTLITLFFLFSLLVNTILPRLQQQLAIRSRSGAGasprteettkleilaPMGRISPPKAVIFKNLF 80
Cdd:MTH00169  1 MPQLDSVTYLTQYIWTLIILFFLFSLLVNYILPKIQQQLVIRTKGVNS---------------VEGKKERPKIEIFKKLF 65


                ..
gi 400201536 81 QL 82
Cdd:MTH00169 66 DL 67
YMF19 pfam02326
Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant ...
 2-44 2.31e-07

Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant and algae mitochondrial F-ATPases (EC:3.6.1.34).


Pssm-ID: 396760  Cd Length: 84  Bit Score: 43.92  E-value: 2.31e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 400201536   2 PQLDTVSFLTQYIWTLITLFFLFSLLVNTILPRLQQQLAIRSR 44
Cdd:pfam02326  1 PQLDKFTYFTQFFWLCLFFFTFYIFLLNFILPKISRILKLRKK 43
 
Name Accession Description Interval E-value
ATP8 MTH00169
ATP synthase F0 subunit 8; Provisional
 1-82 9.38e-26

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214446  Cd Length: 67  Bit Score: 90.04  E-value: 9.38e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 400201536  1 MPQLDTVSFLTQYIWTLITLFFLFSLLVNTILPRLQQQLAIRSRSGAGasprteettkleilaPMGRISPPKAVIFKNLF 80
Cdd:MTH00169  1 MPQLDSVTYLTQYIWTLIILFFLFSLLVNYILPKIQQQLVIRTKGVNS---------------VEGKKERPKIEIFKKLF 65


                ..
gi 400201536 81 QL 82
Cdd:MTH00169 66 DL 67
ATP8 MTH00025
ATP synthase F0 subunit 8; Validated
 1-54 2.30e-12

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214404  Cd Length: 70  Bit Score: 56.22  E-value: 2.30e-12
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 400201536  1 MPQLDTVSFLTQYIWTLITLFFLFSLLVNTILPRLQQQLAIRSR-SGAGASPRTE 54
Cdd:MTH00025  1 MPQLDTTTYLTQYRWTLIVLFLLLFFLVFFVLPTIKRNWLIRKSlMKKGAAFSKG 55
YMF19 pfam02326
Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant ...
 2-44 2.31e-07

Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant and algae mitochondrial F-ATPases (EC:3.6.1.34).


Pssm-ID: 396760  Cd Length: 84  Bit Score: 43.92  E-value: 2.31e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 400201536   2 PQLDTVSFLTQYIWTLITLFFLFSLLVNTILPRLQQQLAIRSR 44
Cdd:pfam02326  1 PQLDKFTYFTQFFWLCLFFFTFYIFLLNFILPKISRILKLRKK 43
PRK13454 PRK13454
F0F1 ATP synthase subunit B'; Provisional
 1-43 1.58e-05

F0F1 ATP synthase subunit B'; Provisional


Pssm-ID: 184061 [Multi-domain]  Cd Length: 181  Bit Score: 40.58  E-value: 1.58e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 400201536   1 MPQLDTVSFLTQYIWTLITLFFLFSLLVNTILPRLQQQLAIRS 43
Cdd:PRK13454  22 MPQLDFSTFPNQIFWLLVTLVAIYFVLTRVALPRIGAVLAERQ 64
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-33 3.92e-03

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 32.31  E-value: 3.92e-03
                         10        20        30
                 ....*....|....*....|....*....|...
gi 400201536   1 MPQLDTVSFLTQYIWTLITLFFLFSLLVNTILP 33
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTP 33
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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