|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 687.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 1 MAPARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLR 80
Cdd:MTH00074 2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 81 SLHANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDL 160
Cdd:MTH00074 82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 161 VQWIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPL 320
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 803432123 321 TKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIFLLLLPLSGTLENKLLDL 379
Cdd:MTH00074 322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
11-362 |
8.88e-118 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 347.16 E-value: 8.88e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 11 LKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFF 90
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 91 FICIYLHIGRGLYYGSY-----LfmeTWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIW 165
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYkkpreL---NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLF 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 166 GGFSVDNATLTRFFSFH-FILPFIIAGANMMHLLFLHQTGSSNPTG----LNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:COG1290 177 GGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNllGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIP--NKLGGVFALLFSILVLFLMPILQTSKQRSLMSR 318
Cdd:COG1290 257 LLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYR 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 803432123 319 PLTKLFFWAFIANTLILTWMGGQPveDPFVTIGQIASAAYFVIF 362
Cdd:COG1290 335 PVRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFF 376
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
3.60e-87 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 262.30 E-value: 3.60e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 9 PVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 89 FFFICIYLHIGRGLYYGSY--LFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 803432123 167 GFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSS 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
2.39e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 244.21 E-value: 2.39e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 18 LIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFFFICIYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 98 IGRGLYYG--SYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 803432123 176 TRFFSFHFILPFIIAGANMMHLLFLHQTG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
236-339 |
2.51e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.57 E-value: 2.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 236 IGALASLSTFPPNLLGDPdnfipANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQT-SKQRS 314
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQN 122
|
90 100
....*....|....*....|....*
gi 803432123 315 LMSRPLTKLffwAFIANTLILTWMG 339
Cdd:TIGR01156 123 PFRRPVATT---VFLFGTVVALWLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 687.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 1 MAPARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLR 80
Cdd:MTH00074 2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 81 SLHANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDL 160
Cdd:MTH00074 82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 161 VQWIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPL 320
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 803432123 321 TKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIFLLLLPLSGTLENKLLDL 379
Cdd:MTH00074 322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 662.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 1 MAPARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 81 SLHANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 161 VQWIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPL 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 803432123 321 TKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIFLLLLPLSGTLENKLLD 378
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 650.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 1 MAPA-RKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLL 79
Cdd:MTH00119 1 MAPNlRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 80 RSLHANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTD 159
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 160 LVQWIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGAL 239
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 240 ASLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRP 319
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 320 LTKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIFLLLLPLSGTLENKLLDL 379
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 634.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 1 MAPARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLR 80
Cdd:MTH00100 1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 81 SLHANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDL 160
Cdd:MTH00100 81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 161 VQWIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPL 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 803432123 321 TKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIFLLLLPLSGTLENKLL 377
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLL 377
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 615.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 5 RKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHA 84
Cdd:MTH00191 2 RKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 85 NGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWI 164
Cdd:MTH00191 82 NGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 165 WGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALASLST 244
Cdd:MTH00191 162 WGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 245 FPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPLTKLF 324
Cdd:MTH00191 242 FSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVV 321
|
330 340 350
....*....|....*....|....*....|....*...
gi 803432123 325 FWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIF 362
Cdd:MTH00191 322 FWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLF 359
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
11-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 594.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 11 LKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFF 90
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 91 FICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWGGFSV 170
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 171 DNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALASLSTFPPNLL 250
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 251 GDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPLTKLFFWAFIA 330
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|..
gi 803432123 331 NTLILTWMGGQPVEDPFVTIGQIASAAYFVIF 362
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYF 352
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 586.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 1 MAPARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLR 80
Cdd:MTH00034 1 TGPLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 81 SLHANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDL 160
Cdd:MTH00034 81 NIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 161 VQWIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:MTH00034 161 VQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPL 320
Cdd:MTH00034 241 SLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 803432123 321 TKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIFLLLLPLSGTLENKLL 377
Cdd:MTH00034 321 SQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-362 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 576.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 1 MAPARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLR 80
Cdd:MTH00145 2 LSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 81 SLHANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDL 160
Cdd:MTH00145 82 SLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 161 VQWIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:MTH00145 162 VEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPL 320
Cdd:MTH00145 242 FLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPL 321
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 803432123 321 TKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIF 362
Cdd:MTH00145 322 NQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFF 363
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-362 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 555.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 1 MAPARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLR 80
Cdd:MTH00016 2 FSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 81 SLHANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDL 160
Cdd:MTH00016 82 NLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 161 VQWIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:MTH00016 162 VQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPL 320
Cdd:MTH00016 242 SVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPL 321
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 803432123 321 TKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIF 362
Cdd:MTH00016 322 NQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYF 363
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
3-377 |
3.43e-179 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 502.69 E-value: 3.43e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 3 PARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSL 82
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 83 HANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQ 162
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 163 WIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALASL 242
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 243 STFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPLTK 322
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 803432123 323 LFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIFLLLLPLSGTLENKLL 377
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLL 376
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
3-362 |
3.06e-176 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 495.21 E-value: 3.06e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 3 PARKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSL 82
Cdd:MTH00224 4 PFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 83 HANGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQ 162
Cdd:MTH00224 84 HANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 163 WIWGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALASL 242
Cdd:MTH00224 164 WIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLM 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 243 STFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPLTK 322
Cdd:MTH00224 244 VLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQ 323
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 803432123 323 LFFWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIF 362
Cdd:MTH00224 324 LLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYF 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
5-380 |
1.54e-171 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 483.44 E-value: 1.54e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 5 RKSHPVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHA 84
Cdd:MTH00053 6 RKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 85 NGASFFFICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWI 164
Cdd:MTH00053 86 NGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 165 WGGFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALASLST 244
Cdd:MTH00053 166 WGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 245 FPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPLTKLF 324
Cdd:MTH00053 246 LFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKIL 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 803432123 325 FWAFIANTLILTWMGGQPVEDPFVTIGQIASAAYFVIFLLLLPLSGTLENKLLDLK 380
Cdd:MTH00053 326 FWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLKLV 381
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
18-374 |
3.08e-131 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 381.21 E-value: 3.08e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 18 LIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFFFICIYLH 97
Cdd:MTH00033 15 IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 98 IGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWGGFSVDNATLTR 177
Cdd:MTH00033 95 IGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNR 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 178 FFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALASLSTFP--PNLLGDPDN 255
Cdd:MTH00033 175 FFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPEN 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 256 FIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPLTKLFFWAFIANTLIL 335
Cdd:MTH00033 255 FIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIIL 334
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 803432123 336 TWMGGQPV-EDPFVTIGQIASAAYFVIFLLLLPLSGTLEN 374
Cdd:MTH00033 335 TWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
11-362 |
8.88e-118 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 347.16 E-value: 8.88e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 11 LKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFF 90
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 91 FICIYLHIGRGLYYGSY-----LfmeTWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIW 165
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYkkpreL---NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLF 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 166 GGFSVDNATLTRFFSFH-FILPFIIAGANMMHLLFLHQTGSSNPTG----LNQNLDKVPFHAYFSHKDTLGLSIMIGALA 240
Cdd:COG1290 177 GGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 241 SLSTFPPNllGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIP--NKLGGVFALLFSILVLFLMPILQTSKQRSLMSR 318
Cdd:COG1290 257 LLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYR 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 803432123 319 PLTKLFFWAFIANTLILTWMGGQPveDPFVTIGQIASAAYFVIF 362
Cdd:COG1290 335 PVRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFF 376
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
12-362 |
8.50e-117 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 343.46 E-value: 8.50e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 12 KIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFFF 91
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 92 ICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWGGFSVD 171
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 172 NATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLsIMIGALASLSTFPPNLLG 251
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 252 DPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILqtSKQRSLMSRpLTKLFFWAFIAN 331
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFV--NNYTSCLNK-LNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|.
gi 803432123 332 TLILTWMGGQPVEDPFVTIGQIASAAYFVIF 362
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLI 347
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
3.60e-87 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 262.30 E-value: 3.60e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 9 PVLKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 89 FFFICIYLHIGRGLYYGSY--LFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 803432123 167 GFSVDNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSS 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-355 |
9.85e-84 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 258.76 E-value: 9.85e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 11 LKIINYSLIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFF 90
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 91 FICIYLHIGRGLYYGSYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWGGFSV 170
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 171 DNATLTRFFSFHFILPFIIAGANMMHLLFLHQTGSSNPTGLNQNL-DKVPFHAYFSHKDTLGLSIMIGALASLSTFPPNL 249
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 250 LGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVfALLFSILVLFLMPILQTSKQRSLmsrpLTKLFFWAFI 329
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGL-VLVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIV 316
|
330 340
....*....|....*....|....*.
gi 803432123 330 ANTLILTWMGGQPVEDPFVTIGQIAS 355
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFS 342
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
2.39e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 244.21 E-value: 2.39e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 18 LIDLPTPANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFFFICIYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 98 IGRGLYYG--SYLFMETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 803432123 176 TRFFSFHFILPFIIAGANMMHLLFLHQTG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
207-354 |
4.52e-51 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 167.82 E-value: 4.52e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 207 NPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALASLSTFPPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAHAILRSIPN 286
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 803432123 287 KLGGVFALLFSILVLFLMPILQTSKQRSlMSRPLTKLFFWAFIANTLILTWMGGQPVEDPFVTIGQIA 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
258-358 |
2.36e-46 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 153.79 E-value: 2.36e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 258 PANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQTSKQRSLMSRPLTKLFFWAFIANTLILTW 337
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 803432123 338 MGGQPVEDPFVTIGQIASAAY 358
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
88-253 |
1.20e-45 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 154.32 E-value: 1.20e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 88 SFFFICIYLHIGRGLYYGSYLFME--TWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIW 165
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 166 GGFSVDNATLTRFFSFHF-ILPFIIAGANMMHLLFLHQTGSSNPTGLNQNLDKVPFHAYFSHKDTLGLSIMIGALASLST 244
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 803432123 245 FPPNLLGDP 253
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
33-208 |
2.97e-32 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 120.97 E-value: 2.97e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 33 FGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLFME- 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 112 -TWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWGGFSVDNATLTRFFSFH-FILPFII 189
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 803432123 190 AGANMMHLLFLHQTGSSNP 208
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
24-208 |
6.92e-29 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 111.74 E-value: 6.92e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 24 PANLSSWWNFGSLLGLCLIIQIATGLFLATHYTTDTSMTVTTSAHICRDVNNGWLLRSLHANGASFFFICIYLHIGRGLY 103
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 104 YGSYLFME--TWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNPLSAAPYIGTDLVQWIWGGFSVDNATLTRFFSF 181
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 803432123 182 H-FILPFIIAGANMMHLLFLHQTGSSNP 208
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
236-339 |
2.27e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 58.65 E-value: 2.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 236 IGALASLSTFPPNLLGDPdnfipANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQT-SKQRS 314
Cdd:COG5679 49 IALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQN 123
|
90 100
....*....|....*....|....*
gi 803432123 315 LMSRPLTKLffwAFIANTLILTWMG 339
Cdd:COG5679 124 PFRRPVATA---VFLFGTLVTLWLG 145
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
236-339 |
2.51e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.57 E-value: 2.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 236 IGALASLSTFPPNLLGDPdnfipANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQT-SKQRS 314
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQN 122
|
90 100
....*....|....*....|....*
gi 803432123 315 LMSRPLTKLffwAFIANTLILTWMG 339
Cdd:TIGR01156 123 PFRRPVATT---VFLFGTVVALWLG 144
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
236-339 |
4.68e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 55.01 E-value: 4.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 803432123 236 IGALASLSTFPPNLLGDPdnfipANPLVTPPHIKPEWYFLFAHAILRSIPNKLGGVFALLFSILVLFLMPILQT-SKQRS 314
Cdd:CHL00058 48 IACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENvNKFQN 122
|
90 100
....*....|....*....|....*
gi 803432123 315 LMSRPLTKLFfwaFIANTLILTWMG 339
Cdd:CHL00058 123 PFRRPVATTV---FLIGTAVALWLG 144
|
|
| |
