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Conserved domains on  [gi|110815832|ref|NP_001034328|]
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zinc finger protein 80 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
KRAB pfam01352
KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc ...
 4-44 5.82e-21

KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc finger proteins containing C2H2 fingers. The KRAB domain is found to be involved in protein-protein interactions. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B. The A box plays an important role in repression by binding to corepressors, while the B box is thought to enhance this repression brought about by the A box. KRAB-containing proteins are thought to have critical functions in cell proliferation and differentiation, apoptosis and neoplastic transformation.


:

Pssm-ID: 460171  Cd Length: 42  Bit Score: 86.37  E-value: 5.82e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 110815832    4 VTYRDVHVNFTQEEWALLDPSQKKLYKDVMLETYRNLNAIG 44
Cdd:pfam01352   2 VTFEDVAVDFTQEEWALLDPAQRNLYRDVMLENYRNLVSLG 42
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
327-728 3.89e-15

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 78.58  E-value: 3.89e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 327 KPFKCNQCDKAFSQYSTLQTHRRTHTGEKPYKCNQ--CDKAFSEKCSLQRHIRIHTGEKPYKCNQCN-KAFSHNYHLHIH 403
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLpLSNSKASSSSLS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 404 RRTHTGEKPYKCNQCDKAFSIHFPLQNHKRTHTGEKPYKCNQCdkaFSEKCHLQNHIRIHtgeKPYKCNQCDKAFSQYFS 483
Cdd:COG5048  112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGN---NSSSVNTPQSNSLH---PPLPANSLSKDPSSNLS 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 484 LQTHRRIHTGEKPFKCNQCDKAFSQYSTLQTHRRTHTGEKPFKCNQCDKAFSKHSTLQSHRRTHSGEKPFKCSQCDKAFS 563
Cdd:COG5048  186 LLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 564 QYNTLQAHRRTHSGE-------KPFKCDQCDKAFSEKCNLQKHIR--IHTGE--KPYKC--NQCDKAFSQYNTLQTHRRI 630
Cdd:COG5048  266 PTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILL 345

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 631 HTGEKPFKC--NQCDKAFS-----RHSTLQTHRRTHTGEKPFKC--NQCDKVFSQYSNLQTHRRTHTGEKP--YKCDQCD 699
Cdd:COG5048  346 HTSISPAKEklLNSSSKFSpllnnEPPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCS 425

                        410       420
                 ....*....|....*....|....*....
gi 110815832 700 KAFSMKCNLQNHVRIHTGEKPYKCNQCDK 728
Cdd:COG5048  426 KSFNRHYNLIPHKKIHTNHAPLLCSILKS 454
zf-H2C2_2 pfam13465
Zinc-finger double domain;
259-284 5.11e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 5.11e-04
                          10        20
                  ....*....|....*....|....*.
gi 110815832  259 HLQKHIRIHTGEKPYKCNQCDKAFSQ 284
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
231-255 9.67e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 9.67e-04
                          10        20
                  ....*....|....*....|....*
gi 110815832  231 NLQTHIRIHTGEKPYKCDQCDKTFS 255
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
203-227 1.17e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 1.17e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  203 HLQSHRRTHTGEKPYKCDQCDKAFS 227
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
288-312 2.56e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.56e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  288 LQTHRRTHTGEKPYKCNQCDKAFSQ 312
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 super family cl34881
FOG: Zn-finger [General function prediction only];
130-284 3.40e-03

FOG: Zn-finger [General function prediction only];


The actual alignment was detected with superfamily member COG5048:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 40.45  E-value: 3.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 130 QKPYECKQCGKGFAKPSHLKRHER--FHTVE--QPFICNE--CDEVFSFKHHLQTHIRVHTGEKPFKCNLCD-------K 196
Cdd:COG5048  287 SLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLNssskfspL 366

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 197 SFSKHNHLQSHRRTHTGEKPYKCD--QCDKAFSEKCNLQTHIRIHTGEKP--YKCDQCDKTFSEKCHLQKHIRIHTGEKP 272
Cdd:COG5048  367 LNNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAP 446

                        170
                 ....*....|..
gi 110815832 273 YKCNQCDKAFSQ 284
Cdd:COG5048  447 LLCSILKSFRRD 458
 
Name Accession Description Interval E-value
KRAB pfam01352
KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc ...
 4-44 5.82e-21

KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc finger proteins containing C2H2 fingers. The KRAB domain is found to be involved in protein-protein interactions. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B. The A box plays an important role in repression by binding to corepressors, while the B box is thought to enhance this repression brought about by the A box. KRAB-containing proteins are thought to have critical functions in cell proliferation and differentiation, apoptosis and neoplastic transformation.


Pssm-ID: 460171  Cd Length: 42  Bit Score: 86.37  E-value: 5.82e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 110815832    4 VTYRDVHVNFTQEEWALLDPSQKKLYKDVMLETYRNLNAIG 44
Cdd:pfam01352   2 VTFEDVAVDFTQEEWALLDPAQRNLYRDVMLENYRNLVSLG 42
KRAB smart00349
krueppel associated box;
4-45 2.14e-18

krueppel associated box;


Pssm-ID: 214630 [Multi-domain]  Cd Length: 61  Bit Score: 79.56  E-value: 2.14e-18
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 110815832     4 VTYRDVHVNFTQEEWALLDPSQKKLYKDVMLETYRNLNAIGF 45
Cdd:smart00349   1 VTFEDVAVYFTQEEWEQLDPAQKNLYRDVMLENYSNLVSLGF 42
KRAB_A-box cd07765
KRAB (Kruppel-associated box) domain -A box; The KRAB domain is a transcription repression ...
 4-40 2.49e-17

KRAB (Kruppel-associated box) domain -A box; The KRAB domain is a transcription repression module, found in a subgroup of the zinc finger proteins (ZFPs) of the C2H2 family, KRAB-ZFPs. KRAB-ZFPs comprise the largest group of transcriptional regulators in mammals, and are only found in tetrapods. These proteins have been shown to play important roles in cell differentiation and organ development, and in regulating viral replication and transcription. A KRAB domain may consist of an A-box, or of an A-box plus either a B-box, a divergent B-box (b), or a C-box. Only the A-box is included in this model. The A-box is needed for repression, the B- and C- boxes are not. KRAB-ZFPs have one or two KRAB domains at their amino-terminal end, and multiple C2H2 zinc finger motifs at their C-termini. Some KRAB-ZFPs also contain a SCAN domain which mediates homo- and hetero-oligomerization. The KRAB domain is a protein-protein interaction module which represses transcription through recruiting corepressors. A key mechanism appears to be the following: KRAB-AFPs tethered to DNA recruit, via their KRAB domain, the repressor KAP1 (KRAB-associated protein-1, also known as transcription intermediary factor 1 beta , KRAB-A interacting protein , and tripartite motif protein 28). The KAP1/ KRAB-AFP complex in turn recruits the heterochromatin protein 1 (HP1) family, and other chromatin modulating proteins, leading to transcriptional repression through heterochromatin formation.


Pssm-ID: 143639  Cd Length: 40  Bit Score: 75.66  E-value: 2.49e-17
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 110815832   4 VTYRDVHVNFTQEEWALLDPSQKKLYKDVMLETYRNL 40
Cdd:cd07765    1 VTFEDVAVYFSQEEWELLDPAQRDLYRDVMLENYENL 37
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
327-728 3.89e-15

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 78.58  E-value: 3.89e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 327 KPFKCNQCDKAFSQYSTLQTHRRTHTGEKPYKCNQ--CDKAFSEKCSLQRHIRIHTGEKPYKCNQCN-KAFSHNYHLHIH 403
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLpLSNSKASSSSLS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 404 RRTHTGEKPYKCNQCDKAFSIHFPLQNHKRTHTGEKPYKCNQCdkaFSEKCHLQNHIRIHtgeKPYKCNQCDKAFSQYFS 483
Cdd:COG5048  112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGN---NSSSVNTPQSNSLH---PPLPANSLSKDPSSNLS 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 484 LQTHRRIHTGEKPFKCNQCDKAFSQYSTLQTHRRTHTGEKPFKCNQCDKAFSKHSTLQSHRRTHSGEKPFKCSQCDKAFS 563
Cdd:COG5048  186 LLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 564 QYNTLQAHRRTHSGE-------KPFKCDQCDKAFSEKCNLQKHIR--IHTGE--KPYKC--NQCDKAFSQYNTLQTHRRI 630
Cdd:COG5048  266 PTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILL 345

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 631 HTGEKPFKC--NQCDKAFS-----RHSTLQTHRRTHTGEKPFKC--NQCDKVFSQYSNLQTHRRTHTGEKP--YKCDQCD 699
Cdd:COG5048  346 HTSISPAKEklLNSSSKFSpllnnEPPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCS 425

                        410       420
                 ....*....|....*....|....*....
gi 110815832 700 KAFSMKCNLQNHVRIHTGEKPYKCNQCDK 728
Cdd:COG5048  426 KSFNRHYNLIPHKKIHTNHAPLLCSILKS 454
zf-H2C2_2 pfam13465
Zinc-finger double domain;
595-620 3.92e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 3.92e-04
                          10        20
                  ....*....|....*....|....*.
gi 110815832  595 NLQKHIRIHTGEKPYKCNQCDKAFSQ 620
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
259-284 5.11e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 5.11e-04
                          10        20
                  ....*....|....*....|....*.
gi 110815832  259 HLQKHIRIHTGEKPYKCNQCDKAFSQ 284
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
231-255 9.67e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 9.67e-04
                          10        20
                  ....*....|....*....|....*
gi 110815832  231 NLQTHIRIHTGEKPYKCDQCDKTFS 255
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
203-227 1.17e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 1.17e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  203 HLQSHRRTHTGEKPYKCDQCDKAFS 227
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
288-312 2.56e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.56e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  288 LQTHRRTHTGEKPYKCNQCDKAFSQ 312
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
130-284 3.40e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 40.45  E-value: 3.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 130 QKPYECKQCGKGFAKPSHLKRHER--FHTVE--QPFICNE--CDEVFSFKHHLQTHIRVHTGEKPFKCNLCD-------K 196
Cdd:COG5048  287 SLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLNssskfspL 366

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 197 SFSKHNHLQSHRRTHTGEKPYKCD--QCDKAFSEKCNLQTHIRIHTGEKP--YKCDQCDKTFSEKCHLQKHIRIHTGEKP 272
Cdd:COG5048  367 LNNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAP 446

                        170
                 ....*....|..
gi 110815832 273 YKCNQCDKAFSQ 284
Cdd:COG5048  447 LLCSILKSFRRD 458
zf-H2C2_2 pfam13465
Zinc-finger double domain;
175-200 4.06e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 4.06e-03
                          10        20
                  ....*....|....*....|....*.
gi 110815832  175 HLQTHIRVHTGEKPFKCNLCDKSFSK 200
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
KRAB pfam01352
KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc ...
 4-44 5.82e-21

KRAB box; The KRAB domain (or Kruppel-associated box) is present in about a third of zinc finger proteins containing C2H2 fingers. The KRAB domain is found to be involved in protein-protein interactions. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B. The A box plays an important role in repression by binding to corepressors, while the B box is thought to enhance this repression brought about by the A box. KRAB-containing proteins are thought to have critical functions in cell proliferation and differentiation, apoptosis and neoplastic transformation.


Pssm-ID: 460171  Cd Length: 42  Bit Score: 86.37  E-value: 5.82e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 110815832    4 VTYRDVHVNFTQEEWALLDPSQKKLYKDVMLETYRNLNAIG 44
Cdd:pfam01352   2 VTFEDVAVDFTQEEWALLDPAQRNLYRDVMLENYRNLVSLG 42
KRAB smart00349
krueppel associated box;
4-45 2.14e-18

krueppel associated box;


Pssm-ID: 214630 [Multi-domain]  Cd Length: 61  Bit Score: 79.56  E-value: 2.14e-18
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 110815832     4 VTYRDVHVNFTQEEWALLDPSQKKLYKDVMLETYRNLNAIGF 45
Cdd:smart00349   1 VTFEDVAVYFTQEEWEQLDPAQKNLYRDVMLENYSNLVSLGF 42
KRAB_A-box cd07765
KRAB (Kruppel-associated box) domain -A box; The KRAB domain is a transcription repression ...
 4-40 2.49e-17

KRAB (Kruppel-associated box) domain -A box; The KRAB domain is a transcription repression module, found in a subgroup of the zinc finger proteins (ZFPs) of the C2H2 family, KRAB-ZFPs. KRAB-ZFPs comprise the largest group of transcriptional regulators in mammals, and are only found in tetrapods. These proteins have been shown to play important roles in cell differentiation and organ development, and in regulating viral replication and transcription. A KRAB domain may consist of an A-box, or of an A-box plus either a B-box, a divergent B-box (b), or a C-box. Only the A-box is included in this model. The A-box is needed for repression, the B- and C- boxes are not. KRAB-ZFPs have one or two KRAB domains at their amino-terminal end, and multiple C2H2 zinc finger motifs at their C-termini. Some KRAB-ZFPs also contain a SCAN domain which mediates homo- and hetero-oligomerization. The KRAB domain is a protein-protein interaction module which represses transcription through recruiting corepressors. A key mechanism appears to be the following: KRAB-AFPs tethered to DNA recruit, via their KRAB domain, the repressor KAP1 (KRAB-associated protein-1, also known as transcription intermediary factor 1 beta , KRAB-A interacting protein , and tripartite motif protein 28). The KAP1/ KRAB-AFP complex in turn recruits the heterochromatin protein 1 (HP1) family, and other chromatin modulating proteins, leading to transcriptional repression through heterochromatin formation.


Pssm-ID: 143639  Cd Length: 40  Bit Score: 75.66  E-value: 2.49e-17
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 110815832   4 VTYRDVHVNFTQEEWALLDPSQKKLYKDVMLETYRNL 40
Cdd:cd07765    1 VTFEDVAVYFSQEEWELLDPAQRDLYRDVMLENYENL 37
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
327-728 3.89e-15

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 78.58  E-value: 3.89e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 327 KPFKCNQCDKAFSQYSTLQTHRRTHTGEKPYKCNQ--CDKAFSEKCSLQRHIRIHTGEKPYKCNQCN-KAFSHNYHLHIH 403
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLpLSNSKASSSSLS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 404 RRTHTGEKPYKCNQCDKAFSIHFPLQNHKRTHTGEKPYKCNQCdkaFSEKCHLQNHIRIHtgeKPYKCNQCDKAFSQYFS 483
Cdd:COG5048  112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGN---NSSSVNTPQSNSLH---PPLPANSLSKDPSSNLS 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 484 LQTHRRIHTGEKPFKCNQCDKAFSQYSTLQTHRRTHTGEKPFKCNQCDKAFSKHSTLQSHRRTHSGEKPFKCSQCDKAFS 563
Cdd:COG5048  186 LLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 564 QYNTLQAHRRTHSGE-------KPFKCDQCDKAFSEKCNLQKHIR--IHTGE--KPYKC--NQCDKAFSQYNTLQTHRRI 630
Cdd:COG5048  266 PTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILL 345

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 631 HTGEKPFKC--NQCDKAFS-----RHSTLQTHRRTHTGEKPFKC--NQCDKVFSQYSNLQTHRRTHTGEKP--YKCDQCD 699
Cdd:COG5048  346 HTSISPAKEklLNSSSKFSpllnnEPPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCS 425

                        410       420
                 ....*....|....*....|....*....
gi 110815832 700 KAFSMKCNLQNHVRIHTGEKPYKCNQCDK 728
Cdd:COG5048  426 KSFNRHYNLIPHKKIHTNHAPLLCSILKS 454
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
299-704 2.04e-14

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 76.27  E-value: 2.04e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 299 KPYKCNQCDKAFSQYGNLQTHRRTHTGEKPFKCNQ--CDKAFSQYSTLQTHRRTHTGEKPYKCN-QCDKAFSEKCSLQRH 375
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSkSLPLSNSKASSSSLS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 376 IRIHTGEKPYKCNQCNKAFSHNYHLHIHRRTHTGEKPYKCNQC-------DKAFSIHFPLQNHkrtHTGEKPYKCNqcdk 448
Cdd:COG5048  112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNnsssvntPQSNSLHPPLPAN---SLSKDPSSNL---- 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 449 afsekcHLQNHIRIHTGEKPYKCNQCDKAFSQYFSLQTHRRIHTGEKPFKCNQCDKAFSQYSTLQTHRRTHTGEKPFKCN 528
Cdd:COG5048  185 ------SLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSAS 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 529 QCDKAFSKHSTLQSHRRTHSGE-------KPFKCSQCDKAFSQYNTLQAHRRT--HSGE--KPFKCD--QCDKAFSEKCN 595
Cdd:COG5048  259 ESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCPysLCGKLFSRNDA 338

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 596 LQKHIRIHTGEKPYKC--NQCDKAFSQYNT-----LQTHRRIHTGEKPFKC--NQCDKAFSRHSTLQTHRRTHTGEKP-- 664
Cdd:COG5048  339 LKRHILLHTSISPAKEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPyn 418

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 110815832 665 FKCNQCDKVFSQYSNLQTHRRTHTGEKPYKCDQCDKAFSM 704
Cdd:COG5048  419 CKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRD 458
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
243-620 5.88e-14

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 75.12  E-value: 5.88e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 243 KPYKCDQCDKTFSEKCHLQKHIRIHTGEKPYKCNQ--CDKAFSQYSTLQTHRRTHTGEKPYKCNQCDKAFSQYGNLQTHR 320
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 321 RTHTGE-KPFKCNQCDKAFSQYSTLQTHRRTHTGEKPYKCNQC----------------------DKAFSEKCSLQRHIR 377
Cdd:COG5048  112 SSSSNSnDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNnsssvntpqsnslhpplpanslSKDPSSNLSLLISSN 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 378 IHTGEKPYKCNQCNKAFSHNYHLHIHRRTHTGEKPYKCNQCDKAFSIHFPLQNHKRT------HTGEKPYKCNQCDKAFS 451
Cdd:COG5048  192 VSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLsssdssSSASESPRSSLPTASSQ 271

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 452 EKCHLQNHIRIHTG-EKPYKCNQCDKAFSQYFSLQTHRR--IHTGE--KPFKC--NQCDKAFSQYSTLQTHRRTHTGEKP 524
Cdd:COG5048  272 SSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISP 351

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 525 FKC--NQCDKAFS-----KHSTLQSHRRTHSGEKPFKC--SQCDKAFSQYNTLQAHRRTHSGEKP--FKCDQCDKAFSEK 593
Cdd:COG5048  352 AKEklLNSSSKFSpllnnEPPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRH 431

                        410       420
                 ....*....|....*....|....*..
gi 110815832 594 CNLQKHIRIHTGEKPYKCNQCDKAFSQ 620
Cdd:COG5048  432 YNLIPHKKIHTNHAPLLCSILKSFRRD 458
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
187-564 1.28e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 73.96  E-value: 1.28e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 187 KPFKCNLCDKSFSKHNHLQSHRRTHTGEKPYKC--DQCDKAFSEKCNLQTHIRIHTGEKPYKC-DQCDKTFSEKCHLQKH 263
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNsKSLPLSNSKASSSSLS 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 264 IRIHTGEKPYKCNQCDKAFSQYSTLQTHRRTHTGEKPYKCNQC----------------------DKAFSQYGNLQTHRR 321
Cdd:COG5048  112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNnsssvntpqsnslhpplpanslSKDPSSNLSLLISSN 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 322 THTGEKPFKCNQCDKAFSQYSTLQTHRRTHTGEKPYKCNQCdkAFSEKCSLQRHIRIHTGEKPYKCNQCNKAFSHNYHLH 401
Cdd:COG5048  192 VSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTN--SQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTAS 269

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 402 IHRRTHTG---------EKPYKCNQCDKAFSIHFPLQNHKRT--HTGE--KPYKC--NQCDKAFSEKCHLQNHIRIHTGE 466
Cdd:COG5048  270 SQSSSPNEsdsssekgfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSI 349

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 467 KPYKC--NQCDKAFSQ-----YFSLQTHRRIHTGEKPFKC--NQCDKAFSQYSTLQTHRRTHTGEKP--FKCNQCDKAFS 535
Cdd:COG5048  350 SPAKEklLNSSSKFSPllnnePPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFN 429

                        410       420
                 ....*....|....*....|....*....
gi 110815832 536 KHSTLQSHRRTHSGEKPFKCSQCDKAFSQ 564
Cdd:COG5048  430 RHYNLIPHKKIHTNHAPLLCSILKSFRRD 458
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 549-628 1.79e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 44.71  E-value: 1.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 549 GEKPFKCS--QCDKAFSQYNTLQAHRrthsgekpfKCDQCDKAFSEKCNLQKHIRIHTGEKPYKCNQCDKAFSQYNTLQT 626
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ..
gi 110815832 627 HR 628
Cdd:COG5189  417 HR 418
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 382-488 2.48e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 44.32  E-value: 2.48e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 382 EKPYKCNQCNKAFSHNYHLHIH---RRTHT-GEKPYKCN--QCDKAFSIHFPLQNHKrthtgekpyKCNQCDKAFSEKCH 455
Cdd:COG5189  315 KLPCTNSSSNGKLAHGGERNIDtpsRMLKVkDGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPS 385

                         90       100       110
                 ....*....|....*....|....*....|...
gi 110815832 456 LQNHIRIHTGEKPYKCNQCDKAFSQYFSLQTHR 488
Cdd:COG5189  386 PEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
595-620 3.92e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 3.92e-04
                          10        20
                  ....*....|....*....|....*.
gi 110815832  595 NLQKHIRIHTGEKPYKCNQCDKAFSQ 620
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
259-284 5.11e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 5.11e-04
                          10        20
                  ....*....|....*....|....*.
gi 110815832  259 HLQKHIRIHTGEKPYKCNQCDKAFSQ 284
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
455-480 7.49e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 7.49e-04
                          10        20
                  ....*....|....*....|....*.
gi 110815832  455 HLQNHIRIHTGEKPYKCNQCDKAFSQ 480
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
231-255 9.67e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 9.67e-04
                          10        20
                  ....*....|....*....|....*
gi 110815832  231 NLQTHIRIHTGEKPYKCDQCDKTFS 255
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
315-340 1.13e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 1.13e-03
                          10        20
                  ....*....|....*....|....*.
gi 110815832  315 NLQTHRRTHTGEKPFKCNQCDKAFSQ 340
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
203-227 1.17e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 1.17e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  203 HLQSHRRTHTGEKPYKCDQCDKAFS 227
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
371-396 1.22e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.22e-03
                          10        20
                  ....*....|....*....|....*.
gi 110815832  371 SLQRHIRIHTGEKPYKCNQCNKAFSH 396
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
679-703 1.26e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.26e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  679 NLQTHRRTHTGEKPYKCDQCDKAFS 703
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
707-732 1.46e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.46e-03
                          10        20
                  ....*....|....*....|....*.
gi 110815832  707 NLQNHVRIHTGEKPYKCNQCDKAFFQ 732
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
288-312 2.56e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.56e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  288 LQTHRRTHTGEKPYKCNQCDKAFSQ 312
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
428-451 2.58e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.58e-03
                          10        20
                  ....*....|....*....|....
gi 110815832  428 LQNHKRTHTGEKPYKCNQCDKAFS 451
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
483-508 2.63e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.63e-03
                          10        20
                  ....*....|....*....|....*.
gi 110815832  483 SLQTHRRIHTGEKPFKCNQCDKAFSQ 508
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
130-284 3.40e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 40.45  E-value: 3.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 130 QKPYECKQCGKGFAKPSHLKRHER--FHTVE--QPFICNE--CDEVFSFKHHLQTHIRVHTGEKPFKCNLCD-------K 196
Cdd:COG5048  287 SLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLNssskfspL 366

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 197 SFSKHNHLQSHRRTHTGEKPYKCD--QCDKAFSEKCNLQTHIRIHTGEKP--YKCDQCDKTFSEKCHLQKHIRIHTGEKP 272
Cdd:COG5048  367 LNNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAP 446

                        170
                 ....*....|..
gi 110815832 273 YKCNQCDKAFSQ 284
Cdd:COG5048  447 LLCSILKSFRRD 458
zf-H2C2_2 pfam13465
Zinc-finger double domain;
624-648 3.47e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 3.47e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  624 LQTHRRIHTGEKPFKCNQCDKAFSR 648
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
175-200 4.06e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 4.06e-03
                          10        20
                  ....*....|....*....|....*.
gi 110815832  175 HLQTHIRVHTGEKPFKCNLCDKSFSK 200
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 465-548 4.21e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.09  E-value: 4.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110815832 465 GEKPYKCN--QCDKAFSQYFSLQTHRrihtgekpfKCNQCDKAFSQYSTLQTHRRTHTGEKPFKCNQCDKAFSKHSTLQS 542
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ....*.
gi 110815832 543 HrRTHS 548
Cdd:COG5189  417 H-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
540-564 4.61e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.61e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  540 LQSHRRTHSGEKPFKCSQCDKAFSQ 564
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
344-367 4.84e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.84e-03
                          10        20
                  ....*....|....*....|....
gi 110815832  344 LQTHRRTHTGEKPYKCNQCDKAFS 367
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
512-536 5.19e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 5.19e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  512 LQTHRRTHTGEKPFKCNQCDKAFSK 536
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
652-676 6.01e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 6.01e-03
                          10        20
                  ....*....|....*....|....*
gi 110815832  652 LQTHRRTHTGEKPFKCNQCDKVFSQ 676
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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