|
Name |
Accession |
Description |
Interval |
E-value |
| JAKMIP_CC3 |
pfam16034 |
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ... |
415-612 |
3.20e-77 |
|
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain] Cd Length: 199 Bit Score: 248.64 E-value: 3.20e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 415 ERERLLRSKRHRGKSLKPPKKH-VVETFFGFDEE-SVDSETlSETSYNTDRTDRTPATPEEDLDDATAREEADLRFCQLT 492
Cdd:pfam16034 1 ERDKLIRARKQRRKEKKKKLRDmVVETFFGYDEEaSVDSET-SSLSYNTDRTDSTPATPDEDLDEGVAAEEAELRFRQLT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 493 REYQALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDSKWVEEKQLLIRTNQDLLEKIYR 572
Cdd:pfam16034 80 REYQALQRAYALLQEQSGGTLDAEREAKTREQLQAELRRAQSRIEDLESALAQKGQDSKWVEEKQALIRRNQELVEKIRI 159
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 150456473 573 LEMEENQLKNEMQDAKDQNELLEFRVLELEERERRSPAFN 612
Cdd:pfam16034 160 MEQEEGRLKNEIQDARDQNELLEFRILELEERERRSPAIN 199
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
24-607 |
2.03e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.04 E-value: 2.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 24 EELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREGLiRQHEQEAARTA 103
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEE-YELLAELARLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 104 KIKEGELQRLQAtlnvlrdgaadkvktalLTEAREEARRAFDGERLRLQQEILELKAARKQAEEAlsncmQADKTKAADL 183
Cdd:COG1196 302 QDIARLEERRRE-----------------LEERLEELEEELAELEEELEELEEELEELEEELEEA-----EEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 184 RAAYQAHQDEVHRIKRECERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQLVQVKEAERHhsspkre 263
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAE------- 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 264 lppgigdmvELMGVQDQHMDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKN 343
Cdd:COG1196 433 ---------LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 344 EDLLQSIQRMEEKIKN--------LTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLE 415
Cdd:COG1196 504 EGFLEGVKAALLLAGLrglagavaVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 416 RERLLRSKRHRGKSLKPPKKHVVETFFGFDEESVDSETLSETSYNTDRTDRTPATPEEDLDDATAREEADLRFCQLTREY 495
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 496 QALQRAYALLQEQvggtLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDSKWVEEKQLLIRTNQDLLEKIYRLEM 575
Cdd:COG1196 664 GGSRRELLAALLE----AEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE 739
|
570 580 590
....*....|....*....|....*....|..
gi 150456473 576 EENQLKNEMQDAKDQNELLEFRVLELEERERR 607
Cdd:COG1196 740 ELLEEEELLEEEALEELPEPPDLEELERELER 771
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
6-363 |
1.03e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 6 RSKGEKPEMETDAVQMANEELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKaklheEKTKELQ 85
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELK-----ELEARIE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 86 ALREGLIRQHEQEAARTAKIKEGELQRLQATLNVLRDGAADKVKTALLTEAREEAR----RAFDGERLRLQQEILELKAA 161
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLtlekEYLEKEIQELQEQRIDLKEQ 848
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 162 RKQAEEALSNcmqaDKTKAADLRAAYQAHQDEVhrikrecerdiRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKE 241
Cdd:TIGR02169 849 IKSIEKEIEN----LNGKKEELEEELEELEAAL-----------RDLESRLGDLKKERDELEAQLRELERKIEELEAQIE 913
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 242 ALDEQLVQVKEAERHHSSPKRELPPGIGDMVElmgVQDQHMDERDVrrfQLKIAELNSVIRKLEDRNTLLADERNELLKR 321
Cdd:TIGR02169 914 KKRKRLSELKAKLEALEEELSEIEDPKGEDEE---IPEEELSLEDV---QAELQRVEEEIRALEPVNMLAIQEYEEVLKR 987
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 150456473 322 sretevqLKPLVEKNKRMNKKNEDLLQSIQRMEEKIKNLTRE 363
Cdd:TIGR02169 988 -------LDELKEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
38-246 |
1.98e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.60 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 38 QQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIKEGELQRLQATL 117
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 118 NVLRDGAADKVKTALLTEAREEARRAFDGERLRLQQEILELKAARKQAEEA-----LSNCMQADKTKAADLRAAYQAHQD 192
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAkkaeeLKKKEAEEKKKAEELKKAEEENKI 1730
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 150456473 193 EVHRIKRECERDIRRL----MDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQ 246
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAeeakKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEE 1788
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
42-808 |
3.03e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.58 E-value: 3.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 42 SKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIKEgELQRLQATLNVLR 121
Cdd:pfam02463 165 SRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLD-YLKLNEERIDLLQ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 122 DGAADKVKTALLTEAREEARRafdgERLRLQQEILELKAARKQAEEALSNCMQADKTKAADLRAAYQAHQDEVHRIKREC 201
Cdd:pfam02463 244 ELLRDEQEEIESSKQEIEKEE----EKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKES 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 202 ERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQLVQVKEAERHHSSPKRELPPGIGDMVELMGVQDQh 281
Cdd:pfam02463 320 EKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELE- 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 282 MDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLQSIQRMEEKIKNLT 361
Cdd:pfam02463 399 LKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQ 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 362 RENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLERERLLRSKRHRGKSLKPPkkhVVETF 441
Cdd:pfam02463 479 LVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVI---VEVSA 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 442 FGFDEESVDSETLSETSYNTDRTDRTPATPEEDLDDATAREEADLRFCQLTREYQALQRAYALLQEQVGGTLDAEREART 521
Cdd:pfam02463 556 TADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELT 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 522 REQLQA-DLLRCQAKIEDLEKLLVEKGQDSKWVEEKQLLIRTNQDLLEKIYRLEMEENQLKNEM-QDAKDQNELLEFRVL 599
Cdd:pfam02463 636 KLKESAkAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLeIKKKEQREKEELKKL 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 600 ELEERErrspafnLQITTFPENHSSALQLFCHQEGVKDVNVSELMKKLDILGDNGNLRNEEQVAIIQAGTVLALCEKWLK 679
Cdd:pfam02463 716 KLEAEE-------LLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKV 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 680 QIEgteaaLTQKMLDLEKEKDLFSRQKGYLEEELDyRKQALDQAYLKIQDLEATLYTALQQEPGRRAGEALSEGQREDLQ 759
Cdd:pfam02463 789 EEE-----KEEKLKAQEEELRALEEELKEEAELLE-EEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEE 862
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 150456473 760 AAVEKVRRQILRQSREFDSQILRERMELLQQAQQRIRELEDKLEFQKRH 808
Cdd:pfam02463 863 ITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNL 911
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| JAKMIP_CC3 |
pfam16034 |
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ... |
415-612 |
3.20e-77 |
|
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain] Cd Length: 199 Bit Score: 248.64 E-value: 3.20e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 415 ERERLLRSKRHRGKSLKPPKKH-VVETFFGFDEE-SVDSETlSETSYNTDRTDRTPATPEEDLDDATAREEADLRFCQLT 492
Cdd:pfam16034 1 ERDKLIRARKQRRKEKKKKLRDmVVETFFGYDEEaSVDSET-SSLSYNTDRTDSTPATPDEDLDEGVAAEEAELRFRQLT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 493 REYQALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDSKWVEEKQLLIRTNQDLLEKIYR 572
Cdd:pfam16034 80 REYQALQRAYALLQEQSGGTLDAEREAKTREQLQAELRRAQSRIEDLESALAQKGQDSKWVEEKQALIRRNQELVEKIRI 159
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 150456473 573 LEMEENQLKNEMQDAKDQNELLEFRVLELEERERRSPAFN 612
Cdd:pfam16034 160 MEQEEGRLKNEIQDARDQNELLEFRILELEERERRSPAIN 199
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
24-607 |
2.03e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.04 E-value: 2.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 24 EELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREGLiRQHEQEAARTA 103
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEE-YELLAELARLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 104 KIKEGELQRLQAtlnvlrdgaadkvktalLTEAREEARRAFDGERLRLQQEILELKAARKQAEEAlsncmQADKTKAADL 183
Cdd:COG1196 302 QDIARLEERRRE-----------------LEERLEELEEELAELEEELEELEEELEELEEELEEA-----EEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 184 RAAYQAHQDEVHRIKRECERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQLVQVKEAERHhsspkre 263
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAE------- 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 264 lppgigdmvELMGVQDQHMDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKN 343
Cdd:COG1196 433 ---------LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 344 EDLLQSIQRMEEKIKN--------LTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLE 415
Cdd:COG1196 504 EGFLEGVKAALLLAGLrglagavaVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 416 RERLLRSKRHRGKSLKPPKKHVVETFFGFDEESVDSETLSETSYNTDRTDRTPATPEEDLDDATAREEADLRFCQLTREY 495
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 496 QALQRAYALLQEQvggtLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDSKWVEEKQLLIRTNQDLLEKIYRLEM 575
Cdd:COG1196 664 GGSRRELLAALLE----AEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE 739
|
570 580 590
....*....|....*....|....*....|..
gi 150456473 576 EENQLKNEMQDAKDQNELLEFRVLELEERERR 607
Cdd:COG1196 740 ELLEEEELLEEEALEELPEPPDLEELERELER 771
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
13-541 |
1.22e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.79 E-value: 1.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 13 EMETDAVQMANEELRAKLTSIQIEFQQEKSKVGKLRERLQEA---------KLEREQEQRRHTAYISELKAKLHEEKTKE 83
Cdd:COG1196 245 EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAqaeeyellaELARLEQDIARLEERRRELEERLEELEEE 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 84 LQALREGLIRQHEQEAARTAKIKEgELQRLQATLNVLRDGAADKVKTALLTEAREEARRAFDGERLRLQQEILELKAARK 163
Cdd:COG1196 325 LAELEEELEELEEELEELEEELEE-AEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 164 QAEEALSNcMQADKTKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKEAL 243
Cdd:COG1196 404 ELEEAEEA-LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 244 DEQLVQVKEAERHHSSPKRELPPGIGDMVELMGVQDQHMDERDVRRFQLKIAELNSVIRKLE--------DRNTLLADER 315
Cdd:COG1196 483 LEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALaaalqnivVEDDEVAAAA 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 316 NELLKRSRETEVQLKPLvekNKRMNKKNEDLLQSIQRMEEKIKNLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEI 395
Cdd:COG1196 563 IEYLKAAKAGRATFLPL---DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRA 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 396 EFLRLQVLEQQHVIDDLSLERERLLRSKRHRGKSLKPPKKHVVEtffgFDEESVDSETLSETSYNTDRTDRTPATPEEDL 475
Cdd:COG1196 640 VTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEE----LAERLAEEELELEEALLAEEEEERELAEAEEE 715
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 150456473 476 DDATAREEADLRFCQLTREYQALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEK 541
Cdd:COG1196 716 RLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
44-605 |
4.78e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.87 E-value: 4.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 44 VGKLRERLQEAKLEREQEQR---RHTAYISELKAKLHE-----EKTKELQALREGLIRQHEQEAARTAKIKEGELQRLQA 115
Cdd:COG1196 167 ISKYKERKEEAERKLEATEEnleRLEDILGELERQLEPlerqaEKAERYRELKEELKELEAELLLLKLRELEAELEELEA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 116 TLNVLRDGAADKVKTALLTEAREEARRAfdgERLRLQQEILELKAARKQAEEALSNC---MQADKTKAADLRAAYQAHQD 192
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRL---ELEELELELEEAQAEEYELLAELARLeqdIARLEERRRELEERLEELEE 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 193 EVHRIKRECERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQLVQVKEAERHHSSPKRElppgigdmv 272
Cdd:COG1196 324 ELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA--------- 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 273 ELMGVQDQHMDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLQSIQR 352
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 353 MEEKIKNLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEF----------------------LRLQVLEQQHVID 410
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLrglagavavligveaayeaaleAALAAALQNIVVE 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 411 DLSLERERLLRSKRHR-------------GKSLKPPKKHVVETFFGFDEESVDSETLSETSYNTDRTDRTPATPEEDLDD 477
Cdd:COG1196 555 DDEVAAAAIEYLKAAKagratflpldkirARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 478 ATAR-EEADLRFCQLTREYQALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDSKWVEEK 556
Cdd:COG1196 635 ALRRaVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 150456473 557 QLLIRTNQDLLEKIYRLEMEENQLKNEMQDAKDQNELLEFRVLELEERE 605
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLE 763
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
158-803 |
7.75e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.02 E-value: 7.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 158 LKAARKQAEEAlsncmQADKTKAADLRAAYQAHQDevhrikRECERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLL 237
Cdd:COG1196 205 LERQAEKAERY-----RELKEELKELEAELLLLKL------RELEAELEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 238 LQKEALDEQLVQVKEAERHHSSPKRELppgigdmvelmgVQDQHMDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNE 317
Cdd:COG1196 274 LELEELELELEEAQAEEYELLAELARL------------EQDIARLEERRRELEERLEELEEELAELEEELEELEEELEE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 318 LLKRSRETEVQLKplvEKNKRMNKKNEDLLQSIQRMEEKIKNLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEF 397
Cdd:COG1196 342 LEEELEEAEEELE---EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLER 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 398 LRLQVLEQQHVIDDLSLERERLLrskrhrgkslkppkkhvvetffgfdeesvdsetlsetsyntdrtdrtpatpEEDLDD 477
Cdd:COG1196 419 LEEELEELEEALAELEEEEEEEE---------------------------------------------------EALEEA 447
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 478 ATAREEADLRFCQLTREYQALQRAYALLQEQVGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDSKWVEEKQ 557
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVA 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 558 LLIRTnQDLLEKIYRLEMEENQLKNEMQDAKDQNELLEFRVLELEERERRSPAFNLQITTFPENHSSALQLFCHQEGVKD 637
Cdd:COG1196 528 VLIGV-EAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 638 VNVSELMKKLDILgdngnlrnEEQVAIIQAGTVLALCEKWLKQIEGTEAALTQKMLDLEKEKDLFSRQKGYLEEELDYRK 717
Cdd:COG1196 607 DLREADARYYVLG--------DTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAE 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 718 QALDQAYLKIQDLEATLYTALQQEPGRRAGEALSEGQREDLQAAVEKVRRQILRQSREFDSQILRERMEL---------- 787
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLeeealeelpe 758
|
650
....*....|....*....
gi 150456473 788 ---LQQAQQRIRELEDKLE 803
Cdd:COG1196 759 ppdLEELERELERLEREIE 777
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
6-363 |
1.03e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 6 RSKGEKPEMETDAVQMANEELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKaklheEKTKELQ 85
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELK-----ELEARIE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 86 ALREGLIRQHEQEAARTAKIKEGELQRLQATLNVLRDGAADKVKTALLTEAREEAR----RAFDGERLRLQQEILELKAA 161
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLtlekEYLEKEIQELQEQRIDLKEQ 848
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 162 RKQAEEALSNcmqaDKTKAADLRAAYQAHQDEVhrikrecerdiRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKE 241
Cdd:TIGR02169 849 IKSIEKEIEN----LNGKKEELEEELEELEAAL-----------RDLESRLGDLKKERDELEAQLRELERKIEELEAQIE 913
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 242 ALDEQLVQVKEAERHHSSPKRELPPGIGDMVElmgVQDQHMDERDVrrfQLKIAELNSVIRKLEDRNTLLADERNELLKR 321
Cdd:TIGR02169 914 KKRKRLSELKAKLEALEEELSEIEDPKGEDEE---IPEEELSLEDV---QAELQRVEEEIRALEPVNMLAIQEYEEVLKR 987
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 150456473 322 sretevqLKPLVEKNKRMNKKNEDLLQSIQRMEEKIKNLTRE 363
Cdd:TIGR02169 988 -------LDELKEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
56-363 |
5.21e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.44 E-value: 5.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 56 LEREQEQRRHTAYISELKAKLHEeKTKELQALREGLirQHEQEAARTAKIKEGELQRLqatlnvLRDGAADKVKTALLTE 135
Cdd:TIGR02168 673 LERRREIEELEEKIEELEEKIAE-LEKALAELRKEL--EELEEELEQLRKELEELSRQ------ISALRKDLARLEAEVE 743
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 136 AREEARRAFDGERLRLQQEILELKAARKQAEEALsncmQADKTKAADLRAAYQAHQDEV---HRIKRECERDIRRLMDEI 212
Cdd:TIGR02168 744 QLEERIAQLSKELTELEAEIEELEERLEEAEEEL----AEAEAEIEELEAQIEQLKEELkalREALDELRAELTLLNEEA 819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 213 KGKDRVILALEKELGVQAGQTQKLLLQKEALDEQLVQVKEAERHHSSPKRELPPGIGDMVELMGVQDQHMDERDVRRFQL 292
Cdd:TIGR02168 820 ANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEEL 899
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 150456473 293 --KIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEknkRMNKKNEDLLQSIQRMEEKIKNLTRE 363
Cdd:TIGR02168 900 seELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQE---RLSEEYSLTLEEAEALENKIEDDEEE 969
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
38-246 |
1.98e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.60 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 38 QQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIKEGELQRLQATL 117
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 118 NVLRDGAADKVKTALLTEAREEARRAFDGERLRLQQEILELKAARKQAEEA-----LSNCMQADKTKAADLRAAYQAHQD 192
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAkkaeeLKKKEAEEKKKAEELKKAEEENKI 1730
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 150456473 193 EVHRIKRECERDIRRL----MDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQ 246
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAeeakKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEE 1788
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
18-255 |
4.69e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 4.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 18 AVQMANEELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRhtayISELKAKLHEekTKELQALREGLIRQHEQ 97
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERR----IAALARRIRA--LEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 98 EAARTAKIKEGELQRLQATLNVL-RDGAADKVKTALLTEAREEARRafdgeRLRLQQEILElkAARKQAEEalsncMQAD 176
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALyRLGRQPPLALLLSPEDFLDAVR-----RLQYLKYLAP--ARREQAEE-----LRAD 158
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 150456473 177 KTKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQLVQVKEAER 255
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
13-363 |
1.15e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.82 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 13 EMETDAVQMANEELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISEL-----KAKLHEEKTKELQAL 87
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLeeaeeELAEAEAEIEELEAQ 790
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 88 REGLIRQHEQEaARTAKIKEGELQRLQATLNVLRDGAADKVKTALLTEAREEARRAfdgERLRLQQEILELKAARKQAEE 167
Cdd:TIGR02168 791 IEQLKEELKAL-REALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEE---QIEELSEDIESLAAEIEELEE 866
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 168 ALSNcMQADKTKAADLRAAYQAHQDEVhrikrecERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQL 247
Cdd:TIGR02168 867 LIEE-LESELEALLNERASLEEALALL-------RSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI 938
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 248 VQVKEAERHHSSPKRELPPGIGDMVELmgvqDQHMDERDVRRFQLKIAELNSVirkledrNTLLADERNELLKRSRETEV 327
Cdd:TIGR02168 939 DNLQERLSEEYSLTLEEAEALENKIED----DEEEARRRLKRLENKIKELGPV-------NLAAIEEYEELKERYDFLTA 1007
|
330 340 350
....*....|....*....|....*....|....*.
gi 150456473 328 QLKPLveknkrmNKKNEDLLQSIQRMEEKIKNLTRE 363
Cdd:TIGR02168 1008 QKEDL-------TEAKETLEEAIEEIDREARERFKD 1036
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
42-808 |
3.03e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.58 E-value: 3.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 42 SKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIKEgELQRLQATLNVLR 121
Cdd:pfam02463 165 SRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLD-YLKLNEERIDLLQ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 122 DGAADKVKTALLTEAREEARRafdgERLRLQQEILELKAARKQAEEALSNCMQADKTKAADLRAAYQAHQDEVHRIKREC 201
Cdd:pfam02463 244 ELLRDEQEEIESSKQEIEKEE----EKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKES 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 202 ERDIRRLMDEIKGKDRVILALEKELGVQAGQTQKLLLQKEALDEQLVQVKEAERHHSSPKRELPPGIGDMVELMGVQDQh 281
Cdd:pfam02463 320 EKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELE- 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 282 MDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLQSIQRMEEKIKNLT 361
Cdd:pfam02463 399 LKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQ 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 362 RENVEMKEKLSAQASLKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLSLERERLLRSKRHRGKSLKPPkkhVVETF 441
Cdd:pfam02463 479 LVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVI---VEVSA 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 442 FGFDEESVDSETLSETSYNTDRTDRTPATPEEDLDDATAREEADLRFCQLTREYQALQRAYALLQEQVGGTLDAEREART 521
Cdd:pfam02463 556 TADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELT 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 522 REQLQA-DLLRCQAKIEDLEKLLVEKGQDSKWVEEKQLLIRTNQDLLEKIYRLEMEENQLKNEM-QDAKDQNELLEFRVL 599
Cdd:pfam02463 636 KLKESAkAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLeIKKKEQREKEELKKL 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 600 ELEERErrspafnLQITTFPENHSSALQLFCHQEGVKDVNVSELMKKLDILGDNGNLRNEEQVAIIQAGTVLALCEKWLK 679
Cdd:pfam02463 716 KLEAEE-------LLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKV 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 680 QIEgteaaLTQKMLDLEKEKDLFSRQKGYLEEELDyRKQALDQAYLKIQDLEATLYTALQQEPGRRAGEALSEGQREDLQ 759
Cdd:pfam02463 789 EEE-----KEEKLKAQEEELRALEEELKEEAELLE-EEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEE 862
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 150456473 760 AAVEKVRRQILRQSREFDSQILRERMELLQQAQQRIRELEDKLEFQKRH 808
Cdd:pfam02463 863 ITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNL 911
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
186-369 |
9.08e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.92 E-value: 9.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 186 AYQAHQDEVHRIKRECERDIRRlmDEIKgkdrvilalekeLGVQAGQTQKLLLQKEALDEQLVQVKEAERHHSSPKRELP 265
Cdd:COG2433 344 AYDAYKNKFERVEKKVPPDVDR--DEVK------------ARVIRGLSIEEALEELIEKELPEEEPEAEREKEHEERELT 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 266 PGIGDMVELMGVQDQHMDErdVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETevqlkplveknKRMNKKNED 345
Cdd:COG2433 410 EEEEEIRRLEEQVERLEAE--VEELEAELEEKDERIERLERELSEARSEERREIRKDREI-----------SRLDREIER 476
|
170 180
....*....|....*....|....
gi 150456473 346 LLQSIQRMEEKIKNLTRENVEMKE 369
Cdd:COG2433 477 LERELEEERERIEELKRKLERLKE 500
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
56-807 |
1.15e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.75 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 56 LEREQEQRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIKEgELQRLQATLNVLRDGAADKVKtaLLTE 135
Cdd:TIGR02169 200 LERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE-ELEKLTEEISELEKRLEEIEQ--LLEE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 136 AREEARRAFDGERLRLQQEILELKAARKQAEEALSNCMQadktKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGK 215
Cdd:TIGR02169 277 LNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKER----ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRR 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 216 DrvilALEKELGVQAGQTQKLLLQKEALDEQLvqvKEAERHHSSPKRELPPGIGDMVELMGVQDQHMDERdvRRFQLKIA 295
Cdd:TIGR02169 353 D----KLTEEYAELKEELEDLRAELEEVDKEF---AETRDELKDYREKLEKLKREINELKRELDRLQEEL--QRLSEELA 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 296 ELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLQSIQRMEEKIKNLTRENVEMKEKLSAQA 375
Cdd:TIGR02169 424 DLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 376 SLKRHTSLNDLSLTRDEQEIEFLRLQVLE-----------------QQHVIDDLSLERERLLRSKRHRG----------- 427
Cdd:TIGR02169 504 ERVRGGRAVEEVLKASIQGVHGTVAQLGSvgeryataievaagnrlNNVVVEDDAVAKEAIELLKRRKAgratflplnkm 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 428 -KSLKPPKKHVVETFFGFDEESVDSE-------------TLSETSYNTDR------------------------------ 463
Cdd:TIGR02169 584 rDERRDLSILSEDGVIGFAVDLVEFDpkyepafkyvfgdTLVVEDIEAARrlmgkyrmvtlegelfeksgamtggsrapr 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 464 --TDRTPATPEE---------DLDDATA-----REEADLRFCQLTREYQALQRAYALLQEQVGGTLDAEREARTR-EQLQ 526
Cdd:TIGR02169 664 ggILFSRSEPAElqrlrerleGLKRELSslqseLRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERlEELE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 527 ADLLRCQAKIEDLEKllvEKGQDSKWVEEKQLLIRTNQDLLEKIYRLEMEE--NQLKNEMQDAKDQNELLEFRVLELEER 604
Cdd:TIGR02169 744 EDLSSLEQEIENVKS---ELKELEARIEELEEDLHKLEEALNDLEARLSHSriPEIQAELSKLEEEVSRIEARLREIEQK 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 605 ERRSpafnlqittfpenhssalqlfcHQEgvKDVNVSELMKKLDILGDNGNLRNEEQVAIIQAGTVLALCEKWLKQIEGT 684
Cdd:TIGR02169 821 LNRL----------------------TLE--KEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAA 876
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 685 EAALTQKMLDLEKEKDLFSRQKGYLEEELDYRKQALDQAYLKIQDLEATLYTALQQ----EPGRRAGEALSEGQR--EDL 758
Cdd:TIGR02169 877 LRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEElseiEDPKGEDEEIPEEELslEDV 956
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 150456473 759 QAAVEKVRRQI-------LRQSREFDSQILR-----ERMELLQQAQQRIRELEDKLEFQKR 807
Cdd:TIGR02169 957 QAELQRVEEEIralepvnMLAIQEYEEVLKRldelkEKRAKLEEERKAILERIEEYEKKKR 1017
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
8-225 |
1.65e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.03 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 8 KGEKPEMETDAVQMANEELRaKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRhtayISELKAKLHEEKTKELQAL 87
Cdd:pfam17380 359 KRELERIRQEEIAMEISRMR-ELERLQMERQQKNERVRQELEAARKVKILEEERQRK----IQQQKVEMEQIRAEQEEAR 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 88 REGLIRQHEQEAARTAKIKEGELQRLQATLNVLRDGAADKVKTALLTEAREEARRAFDGERLRLQQEILELKAA---RKQ 164
Cdd:pfam17380 434 QREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAmieEER 513
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 150456473 165 AEEALSNCMQADKTKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKDRVILALEKE 225
Cdd:pfam17380 514 KRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMERE 574
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
27-213 |
2.13e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 27 RAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIK 106
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLA 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 107 --EGELQRLQATLNVLRDGAAD-KVKTALLTEAREEARRAFDGERLRLQQ-EILELKAARKQAEEALSNcmQADKTKAAD 182
Cdd:COG4913 689 alEEQLEELEAELEELEEELDElKGEIGRLEKELEQAEEELDELQDRLEAaEDLARLELRALLEERFAA--ALGDAVERE 766
|
170 180 190
....*....|....*....|....*....|.
gi 150456473 183 LRAAYQAHQDEVHRIKRECERDIRRLMDEIK 213
Cdd:COG4913 767 LRENLEERIDALRARLNRAEEELERAMRAFN 797
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
297-428 |
2.41e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 41.38 E-value: 2.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 297 LNSVIRKLEDRntLLADERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLQSIQRMEEKIKNLTRENVEMKEKLSAQAS 376
Cdd:COG2433 378 IEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARS 455
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 150456473 377 LKRHTSLNDLSLTRDEQEIEFLRLQVLEQQHVIDDLS--LERERLLRSKRHRGK 428
Cdd:COG2433 456 EERREIRKDREISRLDREIERLERELEEERERIEELKrkLERLKELWKLEHSGE 509
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
2-348 |
2.42e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 2 SKKGRSKGEKPEMETDAVQMANEELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKT 81
Cdd:PTZ00121 1508 AKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAK 1587
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 82 KELQALREGLIRQHEQEAARTA-KIKEGELQRLQATlNVLRDGAADKVKTALLTEAREEARRAfdgERLRLQQEILELKA 160
Cdd:PTZ00121 1588 KAEEARIEEVMKLYEEEKKMKAeEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAEEKKKA---EELKKAEEENKIKA 1663
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 161 ARKQAEEalsncmQADKTKAADLRAAYQAHQDEVHRIKRECE-----RDIRRLMDEIKGKDRVILALEKELGVQAGQTQK 235
Cdd:PTZ00121 1664 AEEAKKA------EEDKKKAEEAKKAEEDEKKAAEALKKEAEeakkaEELKKKEAEEKKKAEELKKAEEENKIKAEEAKK 1737
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 236 LLLQ-KEALDEQLVQVKEAERHHSSPKRELPPGIGDMVELMGVQDQHMDERDVRRFQlkiaELNSVIRKLEDRNTLLAD- 313
Cdd:PTZ00121 1738 EAEEdKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRM----EVDKKIKDIFDNFANIIEg 1813
|
330 340 350
....*....|....*....|....*....|....*..
gi 150456473 314 --ERNELLKRSRETEVQLKPLVEKNKRMNKKNEDLLQ 348
Cdd:PTZ00121 1814 gkEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFE 1850
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
28-253 |
3.89e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 40.81 E-value: 3.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 28 AKLTSIQIEFQQEKSKVGKLRerLQEAKLEREQEQRRHTAyisELKAKLHEEKTKELQALREGLIRQHEQEA----ARTA 103
Cdd:PRK10929 173 AQLTALQAESAALKALVDELE--LAQLSANNRQELARLRS---ELAKKRSQQLDAYLQALRNQLNSQRQREAeralESTE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 104 KIKE--GEL----------------------QRLQATLNVLRDGAAD--KVKTALLTeAREEARRAFD----GERLRLQ- 152
Cdd:PRK10929 248 LLAEqsGDLpksivaqfkinrelsqalnqqaQRMDLIASQQRQAASQtlQVRQALNT-LREQSQWLGVsnalGEALRAQv 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 153 -------------QEILELKAARKQAEEALSNCMQADKTKAAD---LRAAYQAHQDEVHRIKRECerdirrLMDEIKGKD 216
Cdd:PRK10929 327 arlpempkpqqldTEMAQLRVQRLRYEDLLNKQPQLRQIRQADgqpLTAEQNRILDAQLRTQREL------LNSLLSGGD 400
|
250 260 270
....*....|....*....|....*....|....*..
gi 150456473 217 RVILALEKeLGVQAGQtqklllqkeaLDEQLVQVKEA 253
Cdd:PRK10929 401 TLILELTK-LKVANSQ----------LEDALKEVNEA 426
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
22-169 |
6.37e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 22 ANEELRAKLTS--IQIEFQQEKSKVGKLRE---RLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREgLIRQHE 96
Cdd:COG4913 273 ELEYLRAALRLwfAQRRLELLEAELEELRAelaRLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLER-EIERLE 351
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 150456473 97 QEAARtakiKEGELQRLQATLNVLrdGAADKVKTALLTEAREEARR---AFDGERLRLQQEILELKAARKQAEEAL 169
Cdd:COG4913 352 RELEE----RERRRARLEALLAAL--GLPLPASAEEFAALRAEAAAlleALEEELEALEEALAEAEAALRDLRREL 421
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
24-199 |
8.43e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 39.90 E-value: 8.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 24 EELRAKLTSIQIEFQQEKSKVGKLRERLQEAKLEREQEQRRhtayiselkakLHEEKTKELQALREGLIRQHEQEAARTA 103
Cdd:COG4913 272 AELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELE-----------RLEARLDALREELDELEAQIRGNGGDRL 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150456473 104 KIKEGELQRLQATLNvLRDGAADKVKTAL--LTEAREEARRAFdgerLRLQQEILELKAARKQAEEALSNCMQADKTKAA 181
Cdd:COG4913 341 EQLEREIERLERELE-ERERRRARLEALLaaLGLPLPASAEEF----AALRAEAAALLEALEEELEALEEALAEAEAALR 415
|
170
....*....|....*...
gi 150456473 182 DLRAAYQAHQDEVHRIKR 199
Cdd:COG4913 416 DLRRELRELEAEIASLER 433
|
|
| |
