NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|157822043|ref|NP_001099817|]
View 

plasminogen receptor (KT) [Rattus norvegicus]

Protein Classification

plasminogen receptor (KT)( domain architecture ID 10562759)

plasminogen receptor (KT) is a DUF2368 domain-containing protein which plays a key role in the plasminogen-dependent regulation of macrophage invasion, chemotactic migration, and recruitment in the inflammatory response

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2368 pfam10166
Uncharacterized conserved protein (DUF2368); This family is conserved from nematodes to humans. ...
 1-134 1.18e-71

Uncharacterized conserved protein (DUF2368); This family is conserved from nematodes to humans. The function is not known.


:

Pssm-ID: 431104  Cd Length: 134  Bit Score: 210.98  E-value: 1.18e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157822043    1 MGFIFSKSMNENMKNQQEFMVMHARLQLERQLIMQNEMRERQMAMQIAWSREFLKYFGTFFGIATISLAAGAIKRKKPAF 80
Cdd:pfam10166   1 MGQIFSKSMDENMKKNQEFMLEMQRLQLERQLAMQNLMRERQMAMQIARSRELFNWLASFYALAAVGLAAGAMKRKNPLF 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 157822043   81 LIPIVPLSFIFTYQYDLGYGTLLQRMKSEAEDILETEKTKLELPKGLITFESLE 134
Cdd:pfam10166  81 LIPLVPLTFVVGYQYDMAYGDKLQRIREEAERILEEEPELLELPGGLPTVSSIE 134
 
Name Accession Description Interval E-value
DUF2368 pfam10166
Uncharacterized conserved protein (DUF2368); This family is conserved from nematodes to humans. ...
 1-134 1.18e-71

Uncharacterized conserved protein (DUF2368); This family is conserved from nematodes to humans. The function is not known.


Pssm-ID: 431104  Cd Length: 134  Bit Score: 210.98  E-value: 1.18e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157822043    1 MGFIFSKSMNENMKNQQEFMVMHARLQLERQLIMQNEMRERQMAMQIAWSREFLKYFGTFFGIATISLAAGAIKRKKPAF 80
Cdd:pfam10166   1 MGQIFSKSMDENMKKNQEFMLEMQRLQLERQLAMQNLMRERQMAMQIARSRELFNWLASFYALAAVGLAAGAMKRKNPLF 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 157822043   81 LIPIVPLSFIFTYQYDLGYGTLLQRMKSEAEDILETEKTKLELPKGLITFESLE 134
Cdd:pfam10166  81 LIPLVPLTFVVGYQYDMAYGDKLQRIREEAERILEEEPELLELPGGLPTVSSIE 134
 
Name Accession Description Interval E-value
DUF2368 pfam10166
Uncharacterized conserved protein (DUF2368); This family is conserved from nematodes to humans. ...
 1-134 1.18e-71

Uncharacterized conserved protein (DUF2368); This family is conserved from nematodes to humans. The function is not known.


Pssm-ID: 431104  Cd Length: 134  Bit Score: 210.98  E-value: 1.18e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157822043    1 MGFIFSKSMNENMKNQQEFMVMHARLQLERQLIMQNEMRERQMAMQIAWSREFLKYFGTFFGIATISLAAGAIKRKKPAF 80
Cdd:pfam10166   1 MGQIFSKSMDENMKKNQEFMLEMQRLQLERQLAMQNLMRERQMAMQIARSRELFNWLASFYALAAVGLAAGAMKRKNPLF 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 157822043   81 LIPIVPLSFIFTYQYDLGYGTLLQRMKSEAEDILETEKTKLELPKGLITFESLE 134
Cdd:pfam10166  81 LIPLVPLTFVVGYQYDMAYGDKLQRIREEAERILEEEPELLELPGGLPTVSSIE 134
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH